Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0160 ATGGCGGATTCCGACAACGACTCCGGCGGTCCCAACGGCGGAAACGCCAGCGGCGATATCTCAACGAAGGAACAGGATCGTTTCCTGCCGATCGCGAATGTTAGTCGGATCATGAAGAAGGCTTTGCCTGCGAACGCGAAGATCTCGAAGGACGCGAAGGAGACCGTACAGGAGTGTGTATCGGAGTTCATAAGCTTCGTCACAGGTGAGGCGTCGGATAAGTGTCAGAGGGAGAAGAGGAAGACGATCAACGGCGACGATTTGCTCTGGGCGATGACGACCTTAGGGTTTGAGGATTACGTGGAGCCTTTGAAGATTTACTTGCAGAAGTATAGGGAGATGGAAGGCGAGAAGACGACGACGATCGGGAAGCACGGCGAGAAGGACGGTGGTGGTGTTGTTGGGTTTAACGGCGGCGAGGGAATGTACGGTGGGATGTCGACGATGGGGCATCATCATCATCAGGGACACGTGTACGGTTCTGGTGGTGTTGGTGGCTCCAATATGAGATCCAGGTAG 519 0.5472 MADSDNDSGGPNGGNASGDISTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLQKYREMEGEKTTTIGKHGEKDGGGVVGFNGGEGMYGGMSTMGHHHHQGHVYGSGGVGGSNMRSR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0160 172 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 12 141 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mibi08g0160 172 FunFam Nuclear transcription factor Y subunit B-3 17 135 - -
Mibi08g0160 172 Gene3D Histone, subunit A 17 134 IPR009072 GO:0046982
Mibi08g0160 172 ProSitePatterns NF-YB/HAP3 subunit signature. 59 75 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mibi08g0160 172 SUPERFAMILY Histone-fold 25 129 IPR009072 GO:0046982
Mibi08g0160 172 MobiDBLite consensus disorder prediction 1 22 - -
Mibi08g0160 172 PRINTS CCAAT-binding transcription factor subunit A signature 56 74 - -
Mibi08g0160 172 PRINTS CCAAT-binding transcription factor subunit A signature 75 93 - -
Mibi08g0160 172 PRINTS CCAAT-binding transcription factor subunit A signature 94 112 - -
Mibi08g0160 172 MobiDBLite consensus disorder prediction 1 25 - -
Mibi08g0160 172 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 28 92 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0160 Mibi-ChrMibi08 2536270 2536788 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0160 1 154 CCAAT-HAP3 Transcription Factor Family AT4G14540 79.141 1.46e-81 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mibi08g0160 CBFD_NFYB_HMF 1.5e-27 CL0012