Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0121 ATGGCTACCACTAAACCTCTCTCCTTCCCTCTCATTCTCTCCATCTTCTCCATCATCTTCTTCATCTTCAATTCCCACATCCCTCCCTCACAAGCCCAACAAGCATACGTAAACAACAAGCAACTCGACTGCGACAGCGGAATCACCTACAACGCCACCTTAGGCAATCTCTGCAATGGCGTCTCTTCTTCCTGCTCTTCCTACCTCACCTTCCGCTCACTCCCCCCCTACAACTCCCCTCCCTCCATCGCCTTCCTCTTAAACTCCAACGCCTCCGCCATCGCCAAAGCCAACAACATCTCCGATGTCGACTTCATCCCCGACAACACCCTCCTCATCGTCCCCGTCAACTGCTCCTGTAACGGTAACAACGGCAATAACTACTACCAGCATAATTCCTCTTATGTCTTGAAGCAGCATGGTGAGACTTATTTTAGTGTTGCTAATAATACTTATCAGGCGCTTACTACTTGTCAGGCTATTGAGGATCAGAATCCTTATGATAAGAGGAATTTGGTCTCTGGTATGAATGTTAGGGTTCCGATTCGGTGTGCTTGTCCTACGAAGAAGCAGGAGGATTCTGGTTTTAGGTTTTTGCTTACTTATTTGATTTCTCTGGGTGAATCGGTTTCTTCTATTGCTGATTTGTTTGGTGTTGATGCACAAAGCGTTTTGGATGCTAATGAGCTTTCTTCCAATTCCATTATTTTTTATTTCACTCCGATTTCGGTTCCCCTCAGAAATGAACCCAATCCGATCAAATTGACCTCACCTCCGCCGTCGCCGTCTCCACCGCCGCCGTCGACGGCGTCCTCCGCCGGATCTGGCTCTTCCAACAAAGGAGTCATCGTCGGAGTCACCGTCGGTGTTGTTGTTGTTATTCTTCTCGGCTTGTCGGCGTTTATCTTCTGTTTCTGCCGCCGCCGTCGCCGGCGGCCGGAATCTCAGCTTCCTTCATCGGCTCCGGCTAAGACGGTGGACTCCGGCGGGACGACGCAGTCGTGGTCTGTGTCATCGGAGGGGATTCGATATGCGATTGATTCGTTGACGGTTTACAAATTCGAGGATTTGCAGAATGCGACGGGATTCTTCAGCGAAGGGAACAAGATCAAAGGGTCTATTTACAGAGCAAATTTTAAAGGAGATGATGCTGCTGTTAAGATCTACAAAGGTGATGTTTCAAGAGAGATTAGTATTTTGAAGCGACTCAACCATACTAACATTACTAGGCTTTCTGGTTTCTGTGTTCATAAGGGAGATACCTATCTTGTTTATGAGTTTGCTGATAATGGCTCACTTGATGATTGGCTGCATCCTAAAGACAGTGGAAAGAACAAGTTTAAGGATTCATCTTTGACTCTGAATTGGAGGCAGAGGGTTCAGATTGCTCATGATGTAGCTGATGCATTGAATTACCTTCATAACTATACAAACCCTCCTCATATACACAAGAATCTTCAGAGTGGGAGTGTGCTTCTGGATGGGAATTTCAGAGCAAAGGTTTCGAATTTTGGATTAGCAAGAGTGTTGGATGATGGTGATGAAGAAGGTGGGTTTCAAGTGACTAGGCATGTCATAGGTACACAAGGGTATATGGCACCTGAGTATATGGAGAACGGAGTGATAACTCCAAAAATGGATGTTTTTGCACTTGGGGTTGTGATTCTGGAGCTAATATCAGGGAAGGAAGCCATTGTTGGGGAGGAGAAGCTTCTGTCATCGTGTGTGAAGGAGGTGCTTGAGGGAGACAATGTGAGGGAGAAGCTTAGAGGGTTTGTGGATCCAAGTTTTGGGGAGGAATTCCCTCTGGATTTGGTGTACTCCATGGCACAGGTTGCTAAACGATGTGTTGAAAGAGACATGAATTCCAGACCAGGCATTTCTGAGGTGCTCATGACACTGTCCAAGATTCAATCGTCTACTCTTGATTGGGATCCTTCTGACGATCTTGATAGGTCCAGATCCGTTAGCAGAGTGTCTGAAGCCAGGTAG 1992 0.4674 MATTKPLSFPLILSIFSIIFFIFNSHIPPSQAQQAYVNNKQLDCDSGITYNATLGNLCNGVSSSCSSYLTFRSLPPYNSPPSIAFLLNSNASAIAKANNISDVDFIPDNTLLIVPVNCSCNGNNGNNYYQHNSSYVLKQHGETYFSVANNTYQALTTCQAIEDQNPYDKRNLVSGMNVRVPIRCACPTKKQEDSGFRFLLTYLISLGESVSSIADLFGVDAQSVLDANELSSNSIIFYFTPISVPLRNEPNPIKLTSPPPSPSPPPPSTASSAGSGSSNKGVIVGVTVGVVVVILLGLSAFIFCFCRRRRRRPESQLPSSAPAKTVDSGGTTQSWSVSSEGIRYAIDSLTVYKFEDLQNATGFFSEGNKIKGSIYRANFKGDDAAVKIYKGDVSREISILKRLNHTNITRLSGFCVHKGDTYLVYEFADNGSLDDWLHPKDSGKNKFKDSSLTLNWRQRVQIAHDVADALNYLHNYTNPPHIHKNLQSGSVLLDGNFRAKVSNFGLARVLDDGDEEGGFQVTRHVIGTQGYMAPEYMENGVITPKMDVFALGVVILELISGKEAIVGEEKLLSSCVKEVLEGDNVREKLRGFVDPSFGEEFPLDLVYSMAQVAKRCVERDMNSRPGISEVLMTLSKIQSSTLDWDPSDDLDRSRSVSRVSEAR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0121 663 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 15 647 - -
Mibi08g0121 663 Gene3D Phosphorylase Kinase; domain 1 328 427 - -
Mibi08g0121 663 MobiDBLite consensus disorder prediction 318 334 - -
Mibi08g0121 663 MobiDBLite consensus disorder prediction 250 275 - -
Mibi08g0121 663 SUPERFAMILY Protein kinase-like (PK-like) 336 632 IPR011009 -
Mibi08g0121 663 ProSiteProfiles Protein kinase domain profile. 320 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0121 663 FunFam PTI1-like tyrosine-protein kinase 3 428 648 - -
Mibi08g0121 663 Pfam LysM domain 205 244 IPR018392 -
Mibi08g0121 663 Gene3D Transferase(Phosphotransferase) domain 1 429 653 - -
Mibi08g0121 663 MobiDBLite consensus disorder prediction 252 269 - -
Mibi08g0121 663 MobiDBLite consensus disorder prediction 314 334 - -
Mibi08g0121 663 ProSiteProfiles LysM domain profile. 200 244 IPR018392 -
Mibi08g0121 663 MobiDBLite consensus disorder prediction 645 663 - -
Mibi08g0121 663 MobiDBLite consensus disorder prediction 642 663 - -
Mibi08g0121 663 CDD LysM 201 237 IPR018392 -
Mibi08g0121 663 Pfam Protein kinase domain 390 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0121 Mibi-ChrMibi08 1777218 1779209 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0121 11 656 Receptor kinase-like Gene Family AT2G33580 50.512 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi08g0121 Pkinase 2.1e-33 CL0016