Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0098 ATGAAACTTGAAGAAATCCCATTCGAATTCAACCATCATCTTCATCTCCTCCACCACCACCAGCAGCTGCAGCTGCAGACTAAAGACAAGAAATCCCATTTAGCAGTCGCCGCCGATTTCTCACCTCCCGACGTCGCCGTCGTCTCCTCCGGTGACTCCGACGGCGACGATTGCTTTGTCCAGCCTGTCAATTTCGCCATGGTTGATAATGGCATTTTCCGTTCGGGTTTCCCTCAACCTGACAATTTCTCCTTCCTCAAATCCCTCGGTCTTCGTTCCATCGTGTATCTCTGTCCCGAGCCTTATCCGGAGGAGAGCTTAGAGTTCTTGAAGTCAACTGGGATCAAGCTTCATCAATTTGGGATTGATGGTCACAAGGAGCCTTTTGTAAGCATCCCAGAGGACACAATCCGTCAGGCTCTAAGAGTTGTCCTTGATGAGAAGAACCACCCAGTTTTAATTCACTGTAAACGGGGAAAGCACCGAACGGGTTGTGTGGTAGGCTGCTTCAGAAAGTTACAAAAATGGTGCTTGTCATCAGTGTTTGATGAGTACCTACGCTTTGCAGCAGCCAAGGCAAGAATTTCAGATCTGAGATTCATGGAATCGTTTGATATTTCTAGCTTGTCGACGCATTTGCCCTCGTCATTCTCATTCTCACAGTCAAAGAGGTGA 675 0.4785 MKLEEIPFEFNHHLHLLHHHQQLQLQTKDKKSHLAVAADFSPPDVAVVSSGDSDGDDCFVQPVNFAMVDNGIFRSGFPQPDNFSFLKSLGLRSIVYLCPEPYPEESLEFLKSTGIKLHQFGIDGHKEPFVSIPEDTIRQALRVVLDEKNHPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYLRFAAAKARISDLRFMESFDISSLSTHLPSSFSFSQSKR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0098 224 CDD PFA-DSP_Siw14 59 205 - -
Mibi08g0098 224 Pfam Tyrosine phosphatase family 60 211 IPR004861 -
Mibi08g0098 224 ProSitePatterns Tyrosine specific protein phosphatases active site. 154 164 IPR016130 GO:0016311|GO:0016791
Mibi08g0098 224 Gene3D Protein tyrosine phosphatase superfamily 58 208 IPR029021 -
Mibi08g0098 224 PANTHER TYROSINE-PROTEIN PHOSPHATASE 41 219 - -
Mibi08g0098 224 FunFam probable tyrosine-protein phosphatase At1g05000 58 208 - -
Mibi08g0098 224 ProSiteProfiles Dual specificity protein phosphatase domain profile. 64 217 IPR020422 GO:0006470|GO:0008138
Mibi08g0098 224 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 60 205 IPR029021 -
Mibi08g0098 224 PRINTS Plant and fungal dual specificity phosphatase signature 132 146 IPR020428 GO:0016791
Mibi08g0098 224 PRINTS Plant and fungal dual specificity phosphatase signature 96 109 IPR020428 GO:0016791
Mibi08g0098 224 PRINTS Plant and fungal dual specificity phosphatase signature 59 76 IPR020428 GO:0016791
Mibi08g0098 224 PRINTS Plant and fungal dual specificity phosphatase signature 115 129 IPR020428 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0098 Mibi-ChrMibi08 1414720 1418104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0098 49 221 Protein tyrosine phosphatase (PTP) family AT4G03960 68.786 4.22e-85 249