Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0078 ATGTCCAATTCAGACCTCCACCACAATTCTTCCTCCTCCACCACCATCGACTCCGACCTCGACGGCATCGACCTCTCCCCCTCCGATTTCGGCTCCTCCATCCCCCTCAAGAAGGTCCCAAACGGCGACGTCTTCTCCGCCTCACGCGCCGGCGACCTCGACCGCCTCCGCTTCCTCCTCGACTCCGGCATCGTCAACGTCAATGCTCGCGACCAGTGGGACTCCGTCGCCCTCTACTACGCCTGCCTCGCCGGCCACCTCGACGCCGCCCGCCTCTTGCTCGAGTCCGGCGCCATCTGCTCCGAACACACCTTTGACGGCGACCGTTGCCATTACGCCGCCCTTAATTTGAAGGTCAGGAAGCTGTTGAAGGCCTTTGAGGCTCGGCCGCCGCCTTTGGGTCCCTTACAGTCGGCGCTTAGGGATACTTTCTTCGGTTGTGCCGCTAATAGGTCTTACTTGGACCTTGCTGCTGATTCTCCTCAGCTTCAGATTTCAGGTATATCATCGACCCAGGGATCCAATTTCAACCACTTCCCTCCGGATGTGGTTTTCTATGTATCAGGAAGGCCTATTGAGGCTCACAGAGTCATATTAAGTGCGAGGTCACCGTTTTTCAAGAAAAAGTTTGAGAGTGATTGGAAAGAGCGCAGGGAAGTAAGATTCTCTAAGGAGAAATTGTCTTTTCCTGCTCTCTATAGCCTCTTGCACTTCTTTTATTCTGACAGATTAGAGATTGCTGTAGATGGCATGGAAGATCTTGTGAGAATATGTAAAGTATGCAAATGCGAATCACTACAGGCCATTCTGGAGAAAGAACTAATCCATCAAAAATATGCAGAGTATAAAGCGCTTAGAGATTTGGACAATTCTCAGAAACGGTTCATTTTACAGGGTTTATCCCTTCCTGAAGAAGACAGGCTTCCTGCAGCATTGCGTCGAGTTCTTCGGATTGCCCTTTCAAATTCATCTCAAGAAAATTATGTAGATGGTGGAATCGATAAATTGGCTTTTCGGGTGGGCGCAATGCAGATTGCTGATTCCATGGATGATCTTGCAGATGTATGTATAAGAGTTGATAAAAAGGTTTTTCGCTGCCATCAAGTTATTTTAGCATCAAGGTCAGAATACTTCAAAGCAAGATTGTCACGTATACAAGACTTCCATGAAGGGAAAGATGAACCATCTGTTGATTCCCTTCCTTGTCTGGAAGAACGTGATTTGAGCAAGGAATCATTTGAGAAAATGATAGAGTATATGTACACTGATGGTCTGAAGGATATTGATCCGGATCAGGCAGAGGAAATGTTTGATGCTGCTTCTAGATATTTGTTGTTTCCTCTAAAGCGTGCTGTTGCTGATGCTCTGCTGCCACACTTGGAAATGGTTTCACCTGCAGAACTTTGCCATTGGTTGATACTGGCAGACATGTATGGTGTTTTCAAGATCCGGGAATATTGTCTAGATACCATGGCTTGTAATTTTGAAACATTTGCTGATACTACAGAATTCCGAGCAATGCTATTGACGCTGCCACCGCCATCTGGAGATTCTTCTTTACGTACCACTGCCCCAAGTGTTCCGGGGGCTGCTCTAAATGCTGATCAAGGCAATCTTCTCGATGACTTACGAGAGAAATGGCTTGAAATTGAAGCTGCTGAGCTTGATGAGAGAGATGAGAGCGCATTGCAGTTTGACAAACGCCTAGAGATGCTTATGCTTGTCGCAGAGCAAGAAAGAGTAGGCAACACGGGATCAGATGATCTTGAGAATGTGGCTTCCTCGGCTCTTTCTGAAACCTCTATTCAAATTTCTACTGAACAAGAACTGTAG 1833 0.4719 MSNSDLHHNSSSSTTIDSDLDGIDLSPSDFGSSIPLKKVPNGDVFSASRAGDLDRLRFLLDSGIVNVNARDQWDSVALYYACLAGHLDAARLLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLGPLQSALRDTFFGCAANRSYLDLAADSPQLQISGISSTQGSNFNHFPPDVVFYVSGRPIEAHRVILSARSPFFKKKFESDWKERREVRFSKEKLSFPALYSLLHFFYSDRLEIAVDGMEDLVRICKVCKCESLQAILEKELIHQKYAEYKALRDLDNSQKRFILQGLSLPEEDRLPAALRRVLRIALSNSSQENYVDGGIDKLAFRVGAMQIADSMDDLADVCIRVDKKVFRCHQVILASRSEYFKARLSRIQDFHEGKDEPSVDSLPCLEERDLSKESFEKMIEYMYTDGLKDIDPDQAEEMFDAASRYLLFPLKRAVADALLPHLEMVSPAELCHWLILADMYGVFKIREYCLDTMACNFETFADTTEFRAMLLTLPPPSGDSSLRTTAPSVPGAALNADQGNLLDDLREKWLEIEAAELDERDESALQFDKRLEMLMLVAEQERVGNTGSDDLENVASSALSETSIQISTEQEL 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0078 610 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 15 576 IPR044515 -
Mibi08g0078 610 ProSiteProfiles BTB domain profile. 353 429 IPR000210 GO:0005515
Mibi08g0078 610 SUPERFAMILY POZ domain 177 276 IPR011333 -
Mibi08g0078 610 SUPERFAMILY Ankyrin repeat 46 124 IPR036770 -
Mibi08g0078 610 MobiDBLite consensus disorder prediction 585 610 - -
Mibi08g0078 610 ProSiteProfiles BTB domain profile. 181 248 IPR000210 GO:0005515
Mibi08g0078 610 MobiDBLite consensus disorder prediction 1 20 - -
Mibi08g0078 610 SUPERFAMILY POZ domain 348 459 IPR011333 -
Mibi08g0078 610 Gene3D - 41 173 IPR036770 -
Mibi08g0078 610 FunFam BTB/POZ domain-containing protein 38 162 - -
Mibi08g0078 610 FunFam BTB/POZ domain-containing protein 175 297 - -
Mibi08g0078 610 SMART BTB_4 181 278 IPR000210 GO:0005515
Mibi08g0078 610 SMART BTB_4 353 460 IPR000210 GO:0005515
Mibi08g0078 610 CDD BTB_POZ_ZBTB_KLHL-like 352 443 - -
Mibi08g0078 610 Pfam BTB/POZ domain 351 456 IPR000210 GO:0005515
Mibi08g0078 610 Pfam BTB/POZ domain 180 277 IPR000210 GO:0005515
Mibi08g0078 610 MobiDBLite consensus disorder prediction 584 610 - -
Mibi08g0078 610 Gene3D Potassium Channel Kv1.1; Chain A 342 492 IPR011333 -
Mibi08g0078 610 Gene3D Potassium Channel Kv1.1; Chain A 174 296 IPR011333 -
Mibi08g0078 610 Pfam Ankyrin repeats (many copies) 45 94 IPR002110 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mibi08g0078 BTB 1.2e-14 CL0033