Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0064 ATGAATGGGTACGAGACATTTGATTACTGTTTGAGAGTTAATTCAAACGGGTTCACAACAATGTCGGATGACATGCTTGTGCATTTCTCGTCCAACTCCTCCAACCAATCGGATCAGTCCTTGCCTACCAAGATTGCAAAGCTTGAAGCTCGAATGATAGGCAAGGCTTCGTCAGCAGTTGCCACCACCACTCTGTCTTCTGCCCAGCAGTCAACTTGGTCTTCTGTTCCTCCTTCAGCTGCGAAATTTCCGGGACCTACCGAGGATTTGACTGCACCCTCCACTTCCAGTGATTCCGATGATGATAATGGCAGGGAATTTCTAATACAAGCCAACACACAGAAGCGCCAAAAACTTCAAGAAGATGACCATTCAAAGACTTTTGAACATGTTGAGGTGGTTACTGATGGAAGGCAAACTAGTTTGGATGTTGTGGAGGCAAAAGTTAGTGCTGATGTGAATAAGAAAAAAAATGGCCGTGGAAGAGGGAGTTCTGGTTCAGGTAGGGGACGTGGTTCCAGAATTGCTGATCAGACCACCAGAACACAAATTTCTCCTCCAGCAGTTTTGGCCTCCAACGGTCAGCTTGACATCGCATGCCATAGAGAGGGAAGACTCAAAGATCAGATTCGCAATGACAATTGCACTTCATTAGAGGAGGAAAATGCATCTTTACGTGCAAAAGTTGTTGCCTTGGAGGAGGACCTGCGGAAATCAAAACAAGAGATGTCTGATTATCAGAATCTTTGTCCCCAGTTAGAAAAGGAGCTAAAGGACCTGAAAGATCATGAACAGCAAATGAAGCCTAAGAGGACAAAAATAATATCTGATTTGCTGATATCAGTTTCAAAGTCTGAGAGGCAAGAAGCAAGGTTGAAAGTACGACAAGACTCTTTGAGACTGGGAAATGTTGGTGTAATCAGAGCTGGAACTGTCATATCTGAGACTTGGGAAGATGGGCAAGCTTTGAAGGATCTCAATGCCCAACTTAAACAACTGATCGAAACGAAAGAGGCTATTGAGCGGCAGCGCAAGTCATTGAAGAAAAAACAATCTGATAAAGGTGAGGGAACAGATGCAGATACTGGATTACAAGAAGATGAAGTTATCATTCAGGATGAAATCTATAAGTCTCGACTAGCGAGCATTAAACGTGAAGAAGAAATTATTATGCGGGAGAGAGATCGGTATGAATTAGAAAAGGGAAGGCTTATACGTGAGATGAAACGTATACGAGATGAGGATGGTTCTCGTTTCAACAATTTTCAGATTCTGAACCATCGATATGCCCTGCTAAATCTTCTTGGAAAGGGAGGATTCAGTGAGGTTTACAAGGCTTTTGACTTGGTGGAGCATAGATACGTTGCATGTAAGCTTCATGGTTTAAATGCTCAGTGGAGTGAAGAGAAGAAGCAGAGTTACATTCGGCATGCGATTCGGGAGTACAATATCCACAAGACCTTGATACATCATCACATTGTTCGATTGTGGGACATCTTTGAGATAGATCACAATACATTCTGCACCATTTTAGAGTACTGTAATGGGAAGGATCTTGATGCTGTTCTTAAGGCAACACCTATATTGCCTGAGAGAGAGGCTAGGGTGATTCTAGTTCAGGTTTTTCAAGGCCTTGTTTACTTGAATAAAAGAACACAGAAGATTATTCATTATGATTTGAAGCCTGGAAATGTTTTGTTTGATGAGCTTGGCATTGCCAAAGTGACTGATTTTGGTCTCAGCAAAATAGTTGATAATGATGTGGGATCCCAGGGTATGGAACTAACATCTCAGGGGGCTGGAACTTACTGGTATTTGCCTCCGGAATGCTTTGAGCTCAGCAAGACACCTCTTATATCATCGAAGGTTGATGTCTGGTCAGCTGGTGTATTGTTCTATCAAATGCTCTTTGGAAGACGCCCATTTGGCCATGACCAATCTCAAGAGCGTATACTACGTGAAGATACAATTATTAAGGCTCGCAAGGTTGAATTCCCTACTAGACCTACGGTTTCTAATGAGGCAAAGGATTTTATACGGCGATGTTTGACATATAACCAGGCTGAGAGACCGGATGTATTGACCATTGCCCAAGATCCATATCTTTCCTACTCAAAGAAGTAA 2124 0.4261 MNGYETFDYCLRVNSNGFTTMSDDMLVHFSSNSSNQSDQSLPTKIAKLEARMIGKASSAVATTTLSSAQQSTWSSVPPSAAKFPGPTEDLTAPSTSSDSDDDNGREFLIQANTQKRQKLQEDDHSKTFEHVEVVTDGRQTSLDVVEAKVSADVNKKKNGRGRGSSGSGRGRGSRIADQTTRTQISPPAVLASNGQLDIACHREGRLKDQIRNDNCTSLEEENASLRAKVVALEEDLRKSKQEMSDYQNLCPQLEKELKDLKDHEQQMKPKRTKIISDLLISVSKSERQEARLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDLNAQLKQLIETKEAIERQRKSLKKKQSDKGEGTDADTGLQEDEVIIQDEIYKSRLASIKREEEIIMRERDRYELEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLIHHHIVRLWDIFEIDHNTFCTILEYCNGKDLDAVLKATPILPEREARVILVQVFQGLVYLNKRTQKIIHYDLKPGNVLFDELGIAKVTDFGLSKIVDNDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGVLFYQMLFGRRPFGHDQSQERILREDTIIKARKVEFPTRPTVSNEAKDFIRRCLTYNQAERPDVLTIAQDPYLSYSKK 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0064 707 Coils Coil 323 353 - -
Mibi08g0064 707 FunFam Serine/threonine-protein kinase TOUSLED 420 707 - -
Mibi08g0064 707 ProSitePatterns Protein kinases ATP-binding region signature. 435 458 IPR017441 GO:0005524
Mibi08g0064 707 SMART serkin_6 429 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0064 707 CDD STKc_TLK 428 701 - -
Mibi08g0064 707 Pfam Protein kinase domain 430 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0064 707 SUPERFAMILY Protein kinase-like (PK-like) 421 703 IPR011009 -
Mibi08g0064 707 Coils Coil 380 414 - -
Mibi08g0064 707 MobiDBLite consensus disorder prediction 68 104 - -
Mibi08g0064 707 Gene3D Transferase(Phosphotransferase) domain 1 420 707 - -
Mibi08g0064 707 MobiDBLite consensus disorder prediction 147 184 - -
Mibi08g0064 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 555 567 IPR008271 GO:0004672|GO:0006468
Mibi08g0064 707 ProSiteProfiles Protein kinase domain profile. 429 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g0064 707 Coils Coil 215 263 - -
Mibi08g0064 707 PANTHER MIXED LINEAGE PROTEIN KINASE 21 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0064 Mibi-ChrMibi08 949590 959379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0064 412 707 MAP Kinase Kinase Kinase AT3G13530 28.094 5.40e-28 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Mibi08g0064 Pkinase 1.3e-59 CL0016