Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0056 ATGGATTTTGAACTGCGAAGAGCGAGAGAGAAACTAGAGAGAGAGCAGAGGGAGAGGAAGGAAAGAGCCCGCTTGAAATTGGAGAAGGAAAAGAAGGCTAAACAAGAGGCTAGGAATCAAAGGGACGCCCTTGAAGCTGTTCAAAGATCTCGCCGTATTGATGCTGCCGAAGCCCGACTAAAGGCTGAGGAACAGATGCAAGAAAGCTTACTTGCTGGAAGAGGAATTGTGTTTTACCGTTTACTAGAAGCTGTACCTTGTCAAGGTAATGGTGATAAGATCAAACTGCCACCTTCATGCTTCACAGAATTGTCTGATCAGGGTGCCCTTGATAAGGGACCCATGTACTTCCAGTTGTCAATAGTTCATGGGGAAGGTTCTTCAGGGACGAAAGCTACTGATGAAGAGAAACGAGGGACCACCCATTCAGGAGTCTTAGAATTCACTGCGGATGAAGGTTCAGTAGGTCTTCCTCCTCATGTGTGGAATAATTTGTTTGCCGACATCACTTCTAATTCTCCTTTAGTGGAGGTCCGTTATGTTGGGCTTTCAAAGGGGACTTATGCAAAACTTCAACCTGAAAGGGCAGGATTTTCTGATTTGCCAAATCATAAGGCCATCCTTGAAACAAGTCTTCGGCAACATGCAACTCTTTCTCAAGGTGATGTTTTAACAGTTAACTATGGGGAACTTGCATACAAATTGAGGGTTCTTGAGCTGAAACCTTCTTCAAGTGTATCTGTCTTAGAAACAGATATTGAAGTGGACATTGTTGAGCCTGATTCAAGCTCAGAAGAGAGAGATCATCATGTTTTACTCCTGCTTGAATTTGGTGTGCCACAATCTGGAATGGTTGATGAAGGAAATTTTGTATACTACAAATTCTCGATTGACAATGGCAGCTGGGAGAAAATTGTTGCTGAGAATTCCAGTATTGAGGTAAAATTGGAAGCTGAGATAGGAGGTGGAGACACTGATATTTTCATATCTAGACATCCTCTGATATTTCCTACTCGACACCAGCATGAGTGGTCATCCCATGATGTTGGCTCAAAGGCTTTGATTCTTAGCTCTAAAGATAAGAACTTTGGGGCTGGGACGTACAGCATTGGACTTTTTGGATTTAAGGGAACAACCAAATTCAAAATATCAGTAGCAGTTCAGGAAATTTTCCACCAAAAAATAGGTCAACCTGCATCATCGTCAATGTCACATATGGAGACAGACACTGAACAGTGCCGGAATTGCAGGCATTACATACCTAGTAGGACTATTGCATTGCATGAAGCTTACTGTAGCAGACATAACGTTATATGTCAACATGTTGGTTGTGGAGTTGTTCTTAGGATTGAGGAGTCCAAGAACCACATTCACTGTGACAGGTGTGGTAAAGCTTTTCAGCAGGGAGAATTGGAAAAGCACATGAAGGTTTTCCACGAGCCTCTTCACTGTCCTTGTGGTGTAGTCCTTGAGAAAGATCAAATGGTTGAACACCAAGCTTCAGCGTGTCCACTGCGTTTAATTGCATGCCGCTTTTGTGGTGACATGGTTCAAGCTGGAAGTTGCGCTGTTGACATCCGTGATAAGATCAGAGGATTAACTGAACATGAGAGTGTTTGTGGATCCAGGACAGCCCCATGTGATTCTTGTGGGCGTTCAGTGATGTTGAAGGACATGGACATTCACCAAATTGCTGTTCATCAACGAGGCTAA 1713 0.4337 MDFELRRAREKLEREQRERKERARLKLEKEKKAKQEARNQRDALEAVQRSRRIDAAEARLKAEEQMQESLLAGRGIVFYRLLEAVPCQGNGDKIKLPPSCFTELSDQGALDKGPMYFQLSIVHGEGSSGTKATDEEKRGTTHSGVLEFTADEGSVGLPPHVWNNLFADITSNSPLVEVRYVGLSKGTYAKLQPERAGFSDLPNHKAILETSLRQHATLSQGDVLTVNYGELAYKLRVLELKPSSSVSVLETDIEVDIVEPDSSSEERDHHVLLLLEFGVPQSGMVDEGNFVYYKFSIDNGSWEKIVAENSSIEVKLEAEIGGGDTDIFISRHPLIFPTRHQHEWSSHDVGSKALILSSKDKNFGAGTYSIGLFGFKGTTKFKISVAVQEIFHQKIGQPASSSMSHMETDTEQCRNCRHYIPSRTIALHEAYCSRHNVICQHVGCGVVLRIEESKNHIHCDRCGKAFQQGELEKHMKVFHEPLHCPCGVVLEKDQMVEHQASACPLRLIACRFCGDMVQAGSCAVDIRDKIRGLTEHESVCGSRTAPCDSCGRSVMLKDMDIHQIAVHQRG 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0056 570 MobiDBLite consensus disorder prediction 24 45 - -
Mibi08g0056 570 Coils Coil 5 50 - -
Mibi08g0056 570 PANTHER UBIQUITIN FUSION DEGRADATON PROTEIN 1 22 515 IPR004854 GO:0006511
Mibi08g0056 570 Gene3D - 77 183 IPR042299 -
Mibi08g0056 570 Gene3D - 185 258 - -
Mibi08g0056 570 Pfam Ubiquitin fusion degradation protein UFD1 90 260 IPR004854 GO:0006511
Mibi08g0056 570 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 478 526 IPR013083 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi08g0056 UFD1 5e-48 CL0402