Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0036 ATGTTGATTCCCATAACCTCTTTGCGGCAAAAAACTCAGACGCCTTCTTCCCTTCACCGAATTGGCGCCAGCTACCATCTTTCTTTCTGTCGATGCCATTTTCACAGATACCCACAACGTCAAGGCAGCCTTTTTAAGGTGGATTCGTCTTTCTCCGGCGGGTCTACGGGGCAATTATCAGAGGGAATCGATTTTTGCAGCATCATCCAAGGGGTTTCATTCAAGTGCCGTCCAAACCCTATTCAGTTTAGAAGCAGCCTTGCCTTAGCTTTCATTCTAGGAGTTGGCTTGAATACGGGCAAAATGGAGGATGATTTTGATGCCCGGAAAATCAGAAACATATGTATTTTGGCACATGTTGATCATGGAAAAACTACAATGGCTGATCATTTGATTGCTGCTTCAGGGGGTGGTGTACTTCACCCGAAGTTGGCTGGACGAATCAGGTTCATGGACTATCTTGATGAGGAGCAAAGGAGAGCCATCACTATGAAGAGCTCTTCCATTGCTCTTCATTATAAAGACTGCTCTATTAACCTCATAGATTCCCCAGGTCATATGGACTTTTGTAGTGAAGTGTCCACAGCTGCTAGATTGAGTGATGGTGCATTAATTTTGGTTGATGCTGTTGAAGGCGTGCATATACAAACCCATGCTGTGTTGCGACAGTGTTGGATTGAGAAGCTCTCACCTTGCTTAGTTCTTAATAAGATTGATAGGTTGATTAGTGAATTGAAGTTGAGTCCCATGGAAGCCTATATTCGGTTACTACGGATTGTGCTTGAGGTCAATGGGATAGTTAGTGCATTCAAGTCTGAGAAGTATTTGTCAGATGTAGATTCCATACTTGCAGGACCTTCAGGTGATGTGACGGTTGATGAAAACATTGACCTTATAGAGGATGATGAAGAAGATATGTTTCAACCGCAGAAAGGGAATGTGGCTTTTGTGTGTGCACTAGATGGTTGGGGATTCGGAATCCATGAATTTGCTGACATTTATGCTTCAAAATTGGGGGCTAGTGCTGCTGCATTGCAAAAAGCCCTATGGGGTCCTCGGTATTTCAATTCAAAAACTAAAATGATTGTTGGTAAGAAAGGTATTGGCGGAGGAAGTAAGGCAAGGCCAATGTTTGTCCAATTTGTTCTTGAACCACTTTGGCAGGTATACCAAGGAGCTCTAGAGGGTGATGGTGACAAAGGAATGCTTGAGAAAGTTATTAAGTCATTTAGTTTGTCTATACCATCTCGTGAATTGCAAAATAAAGACCCAAAGCTTGTGCTTCAAGCTGTTATGAGTCGGTGGCTTCCTCTTTCAGATACAATTTTATCAATGGTGGTGAAGTGTATGCCAGATCCAGTATCCGCACAATCATTTCGTATCTCACGTCTTCTTCCAAAGAGAGAGGTTCTTGAAAATGGGATTGACCAGAATGTGCTTACAGAGGCAGAGCTTGTCAGAAAATCAGTAGAGACGTGTGATTTGAAACCAGAAGCTCCATGTGTTGCTTTTGTGTCAAAAATGTTTGCCGTACCAATTAAAATGCTTCCTGATAGAGGTTCACTTGGGGAGGTCATGAACTATTCTGGTGATGGAGAGGGTCAATCAGATGAGTGTTTCTTGGCATTTGCTAGGATATTTAGCGGAACTTTATGTGCAAGACAGAAAGTTTTTGTGCTTTCAGCTCTGTATGATCCACTAAAAGGGGAACAAATGCAAAAGCACGTTCAAGAGGCTGAATTACAGTCTTTGTATCTAATGATGGGCCAAGGTTTGAAAGTAGTTACATATGCTAAAGCAGGTAATATTGTTGCTATCCGAGGCCTCGGCCAACATATCCTGAAAAGTGCTACACTCTCATCTTGCAAGAATTGTTGGCCTTTCTCTAGTATGTCTTTCCAAGTGGCCCCAACTTTAAGAGTTTCAATTCAGGCATTTACCACTGAAGAAACAAGTGCACTTGAGAAAGGCATGAGGCTTCTAAATAGAGCAGACCCATTTGTTGAGGTCACTCAACGTGGAAGTGGAGAATATGTATTAGCTGCAGCAGGAGAAGTTCATCTTGAAAGATGTATAAAAGATTTAAAGGAAAGATTTGCTAAGGTAAGCTTTGACGTGTCTGAACCTCTTGTGTCATACAGAGAGACCATTGAAGGTTTGTCTGGCATGTTTGACAATTTGAAAGCTCTTAGTAGGAACTCAGGTTATGTTGAAAAAACAACACCAAATGGTCGATGTGTTGTACGTGTGCATGTAATGAAACTTCCCTCTTCTTTAACGAGGGTACTTGATGATAATTCTGATGTATTGGGGGATGCCATTGGAATAAAGTCTGGTCATACTGTTAAAAATTTAGATTCTCAGAAATCAGGTATTCTTGAAAATGATAATCCAACCGAAGTGTTAAAAAAACGCATAATGGATGCATTGGAAAGTGAGATTTTGAGCACGAATGGAAATGACAAGGATTATGTTGACAAATGCAAGTCAAAATGGTTAGAACTTTTGAGGAGGATATGGGCACTTGGACCAAGGCAAATTGGTCCCAATATTCTCTTTACTCCTGATGTCAAAGCTAAGAGTAGTGAAGGCTCCATTCTAATACGTGGTGATTGTCATGTATCTGAAGTACTGGGCTTTGCTGACGATTCTGGTACTTCCAATACAGAGGCTGAGGCACCCTCAAATGTGAATGAAGCATTAAACTTGGAGGCTAAGCGTCTTGAGAGTAGTGTCATATCTGGGTTCCAATTGGCCACTGCAGCTGGACCCTTGTGTGATGAACCTATGTGGGGTTTGGCATTTGTCATTGAGGCATATATTGATCCCTATTTAGGGCAGAATGATGAATCTGAAACACACCAACAATCTGAGCAATATGGCATATTTGCAGGACAAATAATCGCAACTGTCAAAGATGCTTGTAGAGCGGCTGTGCTCAAGAATAAGCCACGGCTTGTGGAAGCCATGTACTTCTGTGAGTTGAATACACCTACTGAATATTTGGGTCCCATGTATGCTGTACTTGCTCGAAAACGGGCCCGAGTTTTAAAGGAAGAGATGCAAGAAGGTTCCCCTTTCTTTACTGTGCATGCGTACGTGCCTGTTTCTGAAAGTTTTGGTTTTGCTAAAGACCTTAGGAGTGGGACTTCTGGAGCGGCTAGTGCACTTCTTGTACTTAGTCACTGGGAAGTACTTCCTGAGGATCCTTTCTTTGTACCTAAAACTGAAGAGGAGCTTGAAGAGTTTGGAGACGGCTCTAGTGTGCTTCCTAATACAGCAAGAAAGTTGATTAATGCAGTCAGAAGACGCAAAGGCCTTCCTGTGGAGGAAAAAATAGTACAACATGGAACTAAGCAGAGGACACGAGCTCGTAAAGTTTGA 3384 0.4214 MLIPITSLRQKTQTPSSLHRIGASYHLSFCRCHFHRYPQRQGSLFKVDSSFSGGSTGQLSEGIDFCSIIQGVSFKCRPNPIQFRSSLALAFILGVGLNTGKMEDDFDARKIRNICILAHVDHGKTTMADHLIAASGGGVLHPKLAGRIRFMDYLDEEQRRAITMKSSSIALHYKDCSINLIDSPGHMDFCSEVSTAARLSDGALILVDAVEGVHIQTHAVLRQCWIEKLSPCLVLNKIDRLISELKLSPMEAYIRLLRIVLEVNGIVSAFKSEKYLSDVDSILAGPSGDVTVDENIDLIEDDEEDMFQPQKGNVAFVCALDGWGFGIHEFADIYASKLGASAAALQKALWGPRYFNSKTKMIVGKKGIGGGSKARPMFVQFVLEPLWQVYQGALEGDGDKGMLEKVIKSFSLSIPSRELQNKDPKLVLQAVMSRWLPLSDTILSMVVKCMPDPVSAQSFRISRLLPKREVLENGIDQNVLTEAELVRKSVETCDLKPEAPCVAFVSKMFAVPIKMLPDRGSLGEVMNYSGDGEGQSDECFLAFARIFSGTLCARQKVFVLSALYDPLKGEQMQKHVQEAELQSLYLMMGQGLKVVTYAKAGNIVAIRGLGQHILKSATLSSCKNCWPFSSMSFQVAPTLRVSIQAFTTEETSALEKGMRLLNRADPFVEVTQRGSGEYVLAAAGEVHLERCIKDLKERFAKVSFDVSEPLVSYRETIEGLSGMFDNLKALSRNSGYVEKTTPNGRCVVRVHVMKLPSSLTRVLDDNSDVLGDAIGIKSGHTVKNLDSQKSGILENDNPTEVLKKRIMDALESEILSTNGNDKDYVDKCKSKWLELLRRIWALGPRQIGPNILFTPDVKAKSSEGSILIRGDCHVSEVLGFADDSGTSNTEAEAPSNVNEALNLEAKRLESSVISGFQLATAAGPLCDEPMWGLAFVIEAYIDPYLGQNDESETHQQSEQYGIFAGQIIATVKDACRAAVLKNKPRLVEAMYFCELNTPTEYLGPMYAVLARKRARVLKEEMQEGSPFFTVHAYVPVSESFGFAKDLRSGTSGAASALLVLSHWEVLPEDPFFVPKTEEELEEFGDGSSVLPNTARKLINAVRRRKGLPVEEKIVQHGTKQRTRARKV 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0036 1127 Gene3D Yeast translation eEF2 (G' domain) 327 436 - -
Mibi08g0036 1127 Gene3D Elongation Factor G (Translational Gtpase), domain 3 635 712 - -
Mibi08g0036 1127 Gene3D - 984 1118 - -
Mibi08g0036 1127 CDD EF2_II 500 621 - -
Mibi08g0036 1127 SUPERFAMILY EF-G C-terminal domain-like 988 1086 IPR035647 -
Mibi08g0036 1127 FunFam Translation elongation factor 2 636 712 - -
Mibi08g0036 1127 Pfam Elongation factor G C-terminus 986 1070 IPR000640 -
Mibi08g0036 1127 CDD eEF2_snRNP_like_C 988 1067 - -
Mibi08g0036 1127 Gene3D - 102 308 IPR027417 -
Mibi08g0036 1127 Gene3D - 731 982 IPR014721 -
Mibi08g0036 1127 CDD EF2 112 335 - -
Mibi08g0036 1127 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 108 1126 - -
Mibi08g0036 1127 SMART EFG_C_a 985 1074 IPR000640 -
Mibi08g0036 1127 FunFam Elongation factor like GTPase 1 327 436 - -
Mibi08g0036 1127 FunFam Elongation factor 2-like protein 102 315 - -
Mibi08g0036 1127 FunFam Elongation factor like GTPase 1 984 1119 - -
Mibi08g0036 1127 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 109 343 IPR000795 GO:0003924|GO:0005525
Mibi08g0036 1127 CDD aeEF2_snRNP_like_IV 708 992 - -
Mibi08g0036 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 451 IPR027417 -
Mibi08g0036 1127 SUPERFAMILY EF-G C-terminal domain-like 635 709 IPR035647 -
Mibi08g0036 1127 SUPERFAMILY Ribosomal protein S5 domain 2-like 711 987 IPR020568 -
Mibi08g0036 1127 SUPERFAMILY Translation proteins 491 631 IPR009000 -
Mibi08g0036 1127 PRINTS GTP-binding elongation factor signature 113 126 IPR000795 GO:0003924|GO:0005525
Mibi08g0036 1127 PRINTS GTP-binding elongation factor signature 159 167 IPR000795 GO:0003924|GO:0005525
Mibi08g0036 1127 PRINTS GTP-binding elongation factor signature 231 240 IPR000795 GO:0003924|GO:0005525
Mibi08g0036 1127 PRINTS GTP-binding elongation factor signature 179 189 IPR000795 GO:0003924|GO:0005525
Mibi08g0036 1127 PRINTS GTP-binding elongation factor signature 195 206 IPR000795 GO:0003924|GO:0005525
Mibi08g0036 1127 Gene3D Translation factors 453 634 - -
Mibi08g0036 1127 Pfam Elongation factor Tu GTP binding domain 110 450 IPR000795 GO:0003924|GO:0005525
Mibi08g0036 1127 Pfam Elongation factor Tu domain 2 541 619 IPR004161 GO:0005525
Mibi08g0036 1127 TIGRFAM small_GTP: small GTP-binding protein domain 110 241 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0036 Mibi-ChrMibi08 583283 588777 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g0036 104 1127 Eukaryotic Initiation Factors Gene Family AT3G22980 70.000 0.0 1472