Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g2162 ATGGATGGGGTCAGCCCTGATAATGAAGCGGCGCAATTTCAGTACAGAGACGTGGGCGTTGCATCCTCATCTTCAGCATCGAAGGAGTTAGGATGGAAGCCCAGCCAACTTGGGTTTACTCCATATATATGGCCGGGTGAAACGTCGGATAATTCCCAAACTCTGCGTGTGGTTGTGAGGAAATCCCTGCTGACAAGGTTGACCAGGGAAATAGTTGAAACTTACCAAATATGCAATCCGCAGTTCAAGTATTCAGAAGAGCTAAATCCAAAAAGATATTTGACCAGCCCATCAGTTGGAGTGCTTAATGATGGCTATGATAATGTTAACTCAGATCTTATTCTGACAGTGAACTATGTCTTGGTCAATTTAGAGAGAAATAGAAGATATATTGTCAAAGATGTCCTTGGCCATGGGACATTTGGACAAGTGGCCAAATGTTGGGTTTCGGATACTAGCAGCTATGTTGCTGTGAAGATCATAAAAAATCAACCTGCATACTATCAACAGGCATTGGTTGAAGTATCTATTTTGAATACGTTAAACAAGAAGTATGATCCTGAGGACAAGCATCACATTGTTCGTATATATGATTACTTTGTATATCATCGGCATTTGTGCATATGCTTTGAACTTTTGGACACAAATTTGTATGAGCTTATCAAGTTGAACCATTTTAGGGGATTATCTTTGAGTATTGTTCAGTTGTTCTCTAAGCAGATATTACATGGACTGGCTCTATTAAAAGATGCTGGCATCATTCATTGTGATCTGAAGCCAGAAAACATTCTTCTATGTACAAGTGTGAAGCCAGCAGAAGTCAAGATTATTGACTTTGGATCAGCATGCATGGAAGACCGCACTGTCTACTCCTATATTCAGAGTCGATATTATAGGTCTCCTGAGGTTCTTCTTGGCTATCAATACACAACAGCTATTGATATGTGGTCTTTTGGGTGCATAGTGGCTGAATTGTTTCTTGGATTACCATTATTTCCTGGTGCTTCTGAATTTGATCTTTTGAGGCGGATGATTGAAATACTCGGAGGACAACCGCCTGATTATGTACTGAGGGAGGCCAAAAACACTAGTAAATTTTTTAAGTGTATTGGGAGTCTTCAGAATGGAGAGAACAGTGAGATTTCGACAAATGGAAGGAGTTCTTATCAAGCTTTGACTTTGGAAGAATATGAAGCTAGAGAGTTGAAGAAGCCGACAATTGGGAAAGAGTATTTCAATCATATGAATCTTGAAGCAATTGTTAATAACTATCCCTATAGGAAAAACGTGCCGAAGGAAGATATTCTTAAAGAGAGTCAAATACGAATGGCATTAATTGATTTTTTGAGAGGGCTAGTTGAATTTGATCCTGCAAAACGCTGGTCACCCTTCCAGGCTTCGAGGCACCCTTTTGTGACAGGGGAACCTTTTACCCATCCTTATGAGCCTCCTCCGGAGACCCCTCGTGTGCCGGTGGTTCAAGCTGTTAAAGTGGATCATCACCCTGGTGGAGGGCACTGGTTTGCTGCTGGTCTATCACCTAACGTTGCTGGCAAAAGTAGGCCATCACTGTATAGCAGCTTGCATTTCCAGATGGTGCAATATCCACCTGCTAACAGCTATGGCAGTGTAGGAAGTCATGGTAGCTATAATGATAGTGTTGGGCTTGGAAGTAGTTACGGAAGTTATGGAGAAAGCAATAACATGTTTGCATACTATTCACCTGTTGGTCCATCTGGTATTCATTTGCTTGGTCATGGGAGTACGTCAATGCTGGGAAATAGTCCTGATGCAAGGAGAAGAGTTGTTCAATACCAGCCAGGGAATGGTCTAGGTATAAGTCCATCTGCTGGAACTTTCACCCATCTGCCCCTTGGTGCCAGTCCCTCACAATTTACGCCTCCAAGTTCCTTTACTCAAGTATCAGCAAGCTCTCCAGGACACTATGGACCTACATCTCCCGCAAGAGGCACTTCTCATGGATCACCATTGGGGAAGACATCTACATTTAGCCAATTTAATAGAAGAAAAAATTGGGGATGTTCTGGAGGTCCTCAAACTCAAGACATAACATTTTCTCCACATTGGCAAGGTCAATGTCCTGACAACTCCATCCGTGGTGAAGGAACAGCGCAAGTTCTTAGCAGCTCGCCCTCTTATCTGCAATCAAATTCTGATGCTGCTAGCTGGAAGCAGCGAGGAGGTGGAACTAATCAGAAAATGGCTTGTGTGTTTATGCCAAGTTCTAATTCAAACTTGCAATCAACAGAATTGAGACATGATAACCCAGAGTCTTGCTTATCATTGCCTGATCCTGGTGATTGGGATCCTAATTATAGTGATGAACTACTTCTGCAAGAGGATAGTTCAGATGGAAGCTGCTTGGCAACTGAGTTTAGCGGAAGTATGAATATTAGTTCCACCGAACCATTGGTTGGATTTGGAAGGTTCAACCATGCTTCTAGTACAAGCTCTCCGATATCCATTCAGAGACAAAATGAACCGGTTCAAGCATATTCTAAGGTAGAGATGGATGGCCCTCCGGCTCATGATTTGCAAGCTGGATACATGCGCTCGATGTCTAAGCCTTTTCATCTCATACCTCGTATTTTGCAAAATTCACCTAGCCGTTTTGGTCTGCAACCTGTCCAAAGATTTGCCCATGGCAGACCCACTCAGTTCAGTGATTGGAATCAAATTAAGGCACAGGCTCCTCCTTCCAGTTTCGGCGGTGGAGGCCCTCGTTCTCCAAGAAGTAGCTCATTTTCCAATAGTATGACATGGGGGCGTAGAGTCAATCCTCCTGTCTCAAACGTTCCGTCTGCGTCCTGTGCAAGGAAAGACTATGCAAGAATAGACTAG 2862 0.4305 MDGVSPDNEAAQFQYRDVGVASSSSASKELGWKPSQLGFTPYIWPGETSDNSQTLRVVVRKSLLTRLTREIVETYQICNPQFKYSEELNPKRYLTSPSVGVLNDGYDNVNSDLILTVNYVLVNLERNRRYIVKDVLGHGTFGQVAKCWVSDTSSYVAVKIIKNQPAYYQQALVEVSILNTLNKKYDPEDKHHIVRIYDYFVYHRHLCICFELLDTNLYELIKLNHFRGLSLSIVQLFSKQILHGLALLKDAGIIHCDLKPENILLCTSVKPAEVKIIDFGSACMEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEILGGQPPDYVLREAKNTSKFFKCIGSLQNGENSEISTNGRSSYQALTLEEYEARELKKPTIGKEYFNHMNLEAIVNNYPYRKNVPKEDILKESQIRMALIDFLRGLVEFDPAKRWSPFQASRHPFVTGEPFTHPYEPPPETPRVPVVQAVKVDHHPGGGHWFAAGLSPNVAGKSRPSLYSSLHFQMVQYPPANSYGSVGSHGSYNDSVGLGSSYGSYGESNNMFAYYSPVGPSGIHLLGHGSTSMLGNSPDARRRVVQYQPGNGLGISPSAGTFTHLPLGASPSQFTPPSSFTQVSASSPGHYGPTSPARGTSHGSPLGKTSTFSQFNRRKNWGCSGGPQTQDITFSPHWQGQCPDNSIRGEGTAQVLSSSPSYLQSNSDAASWKQRGGGTNQKMACVFMPSSNSNLQSTELRHDNPESCLSLPDPGDWDPNYSDELLLQEDSSDGSCLATEFSGSMNISSTEPLVGFGRFNHASSTSSPISIQRQNEPVQAYSKVEMDGPPAHDLQAGYMRSMSKPFHLIPRILQNSPSRFGLQPVQRFAHGRPTQFSDWNQIKAQAPPSSFGGGGPRSPRSSSFSNSMTWGRRVNPPVSNVPSASCARKDYARID 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g2162 953 SMART serkin_6 130 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g2162 953 Gene3D Transferase(Phosphotransferase) domain 1 211 473 - -
Mibi07g2162 953 MobiDBLite consensus disorder prediction 622 734 - -
Mibi07g2162 953 MobiDBLite consensus disorder prediction 752 780 - -
Mibi07g2162 953 MobiDBLite consensus disorder prediction 913 940 - -
Mibi07g2162 953 MobiDBLite consensus disorder prediction 902 953 - -
Mibi07g2162 953 Gene3D Phosphorylase Kinase; domain 1 95 210 - -
Mibi07g2162 953 PANTHER DUAL SPECIFICITY PROTEIN KINASE 83 475 - -
Mibi07g2162 953 SUPERFAMILY Protein kinase-like (PK-like) 125 494 IPR011009 -
Mibi07g2162 953 FunFam Dual specificity tyrosine-phosphorylation-regulated kinase 1A 93 209 - -
Mibi07g2162 953 Pfam Protein kinase domain 131 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g2162 953 CDD PKc_YAK1 130 472 - -
Mibi07g2162 953 ProSiteProfiles Protein kinase domain profile. 130 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g2162 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Mibi07g2162 953 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g2162 Mibi-ChrMibi07 45862193 45878869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g2162 129 358 MAP Kinase Gene Family AT3G18040 34.855 1.18e-31 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Mibi07g2162 Pkinase 4.7e-50 CL0016