Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g2159 ATGGTCACGTCCACGAGCTTTTTGTGCAGTAGAATCCCAGCAAAATTGGCTTCAAGACGTTGTAATGCCTCTAATGGCCACTTTTCTTCACTTCGCTCCCTCACTCTATTTACTCGTAATAATGCCTACACCTTGTGCAGCTCATCACCTTCGTTCGGCTTCCAACGAGTCATTCGTAACGGCCCCAGCGGGAGCAATAATGAAACTAAGATTCCCAATGGCACCAAAAGCAGGAGACGACGTCGATTCAAAGCAAGTACAAAGCTACCAAATGCTAACGAAACTAACAAGAATGGGTCTTCCCAATATCCATCTCAGTCATCCTTGCCAGTGTTCCCGGCAGTGGACTTGAGCACCCAGATAGAAGAACAGGAAAATAGCATTGAGGCAGCACCCCTCAACGTGAGCGGTATCTCCCAGAATGGAGACCCACTCGGGCGGAAGGATCTGGGGAAGAGCGTTGTGCGATGGATTCGTCATAGTATGAGGGCCATGGCTTCCGATTTTGCTTCTGCGGAGGCACAGGGGGACTTCTCGGAGCTGAGGCAGCGCATGGGACCTGGTCTCACCTTTGTTATTCAGGCTCAGCCTTACCTTAATGCCGTTCCCATGCCTCTTGGCCTTGAAGTTATCTGCTTCAAAGCTTGCACCCATTATCCTACTCTGTTCGATCACTTTCAAAGGGAGCTACGGGACGTTCTCCAAGGCCTCCAGCGCAAATCATTGGTCCAGAACTGGTGTGAAACTGAATCTTGGAAACTACTGAAAGAGCTCGCCAAATCAGCTCAGCATAAGGCAATTGCAAGAAAGATAGCGCAGCCGAAGTCTGCCTCTGTCCAAGGCGTTTTAGGAATGGACTTAGAGAAGGCCAAGGCAATACAGCACAGAATTGACGAGTTCACCAAGCACATGTCAGAATTACTCCGCATAGAGAGGGATGCCGAGTTGGAGTTTACACAAGAAGAATTGGATGCTGTTCCTAGACCAGATGATGCTTCTGACTCCTCGAAGCCGATTGAGTTCTTGGTTAGCCATGGGCAGGCTCAACAAGAACTCTGTGACACTATTTGTAATTTAAACGCCATCAGTACGTCTACAGGACTGGGAGGAATGCATTTGGTGTTATTCAAGGTTGAAGGGAACCACCGGTTACCACCTACTACACTTTCACCTGGAGACATGGTTTGTGTGAGAACATGCGATAATAGGGGTGCAGTCACAACCTCTTGTCTGCAAGGCTTTGTTAACAATCTCGGGGATGACGGCTGTAGTATCAGTGTTGCTTTAGAGTCACGCCATGGTGATCCTACATTCTCTAAACTCTTTGGGAAGAGTGTGCGTATTGACCGAATCCAAGGACTGGCTGATACTCTTACATATGAGCGCAACTGTGAAGCGCTAATGCTGCTTCAGAAGAATGGTCTGCGAAAGAAAAATCCTTCTATTGCTGTTGTTGCGACACTGTTTGGAGACAGGGAAGATTTTGCTTGGCTTGAGAAAAATCATATAGCTGACTGGGATGAAGAGAACATAAACGAACTGTTAGGAAGTGAAAACTTTGATAATTCCCAGCAAAAAGCTATAGCACTAGGTTTAAATAAAAATAGGCCTGTATTGGTCATCCAAGGGCCCCCTGGTACTGGGAAGACAGGTTTGCTCAAGCATCTTATAGCATATGCTGCTCAGCGAGGTGAAAGGGTTCTTGTAACGGCACCTACTAATGCTGCTGTTGATAACATGGTGGAAAAGCTTTCAGATATTGGGTTGAATATTGTGAGGGTCGGCAATCCTGCTCGCATATCAAAAACTGTAGGTTCAAAGTCTTTAGGAGAAATTGTAAATGCTAAGCTTGCAAGTTTTCGAGATGAGTATGAAAGGAAGAAGTCAGATCTGAGGAGAGATCTTAGACATTGCTTAAAAGATGATTCATTAGCAGCTGGCATACGCCAACTTTTGAAACAGTTGGGAAGGTCACTGAAGAGAAAGGAAAAGGAGACAATGAACGAGGTTCTATCTAGTGCCCGGGTTGTACTTGCCACAAATACTGGAGCAGCTGATCCATTGATTCGAAGGCTAGATACTTTTGACTTGGTTGTTATAGATGAGGCTGGACAGGCAATTGAACCTTCTTGCTGGATTCCTATATTGCAGGCGAAGCGCTGCATTCTTGCTGGTGATCAATGCCAACTTGCTCCTGTAATATTATCTAGAAAGGCTTTGGAAGGAGGTCTTGGAATATCATTACTGGAGAGGGCTACAACTCTGCATGAAGGGGTTCTCACCACAAGGTTAACAATACAATACCGTATGAATGATGTGATTGCTAGCTGGGCATCAAAGGAGATGTATGGTGGATTATTGAAGTCATCTGAGAATGTCTTCTCTCATCTTCTTGTAGACTCTCCTTTTGTCAAGCCTACATGGATAACACAATGTCCTCTATTGTTGCTCGATACAAGAATGCCATATGGAAGCCTGTCAATTGGGTGCGAAGAGCATCTAGACCCAGCTGGAACAGGTTCATTTTATAATGAAGGAGAAGCTGATATTGTCGTGCAGCATGTCTTTTCCTTAATTTGTGCCGGTGTCAACCCGACAGCTATTATGGTGCAATCTCCTTATGTTGCTCAAGTACAACTTTTGAGGGACATGCTGGATGAGCTGCCAGAGGCTATTGGTACTGAGGTTGCAACAATTGACAGCTTTCAAGGACGGGAGGCTGATGCAGTAATTATATCAATGGTACGTTCAAACGCTTTAGGTGCTGTTGGATTCCTAGGTGATAGCAGAAGAATCAATGTTGCTATCACGAGGGCACGCAAGCATGTAGCAGTGGTATGTGACAGCTCCACAATTTGCCACAATACATTCTTAGCAAGACTTCTACGTCACATCCGGCATTTCGGTAGGGTGAAACATGCCGAACCCGGTCATTCTGGGGGTTCTGGGCTGGGCATGAATCCAATGTTACCCTCCATCAAATAG 2985 0.4586 MVTSTSFLCSRIPAKLASRRCNASNGHFSSLRSLTLFTRNNAYTLCSSSPSFGFQRVIRNGPSGSNNETKIPNGTKSRRRRRFKASTKLPNANETNKNGSSQYPSQSSLPVFPAVDLSTQIEEQENSIEAAPLNVSGISQNGDPLGRKDLGKSVVRWIRHSMRAMASDFASAEAQGDFSELRQRMGPGLTFVIQAQPYLNAVPMPLGLEVICFKACTHYPTLFDHFQRELRDVLQGLQRKSLVQNWCETESWKLLKELAKSAQHKAIARKIAQPKSASVQGVLGMDLEKAKAIQHRIDEFTKHMSELLRIERDAELEFTQEELDAVPRPDDASDSSKPIEFLVSHGQAQQELCDTICNLNAISTSTGLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRTCDNRGAVTTSCLQGFVNNLGDDGCSISVALESRHGDPTFSKLFGKSVRIDRIQGLADTLTYERNCEALMLLQKNGLRKKNPSIAVVATLFGDREDFAWLEKNHIADWDEENINELLGSENFDNSQQKAIALGLNKNRPVLVIQGPPGTGKTGLLKHLIAYAAQRGERVLVTAPTNAAVDNMVEKLSDIGLNIVRVGNPARISKTVGSKSLGEIVNAKLASFRDEYERKKSDLRRDLRHCLKDDSLAAGIRQLLKQLGRSLKRKEKETMNEVLSSARVVLATNTGAADPLIRRLDTFDLVVIDEAGQAIEPSCWIPILQAKRCILAGDQCQLAPVILSRKALEGGLGISLLERATTLHEGVLTTRLTIQYRMNDVIASWASKEMYGGLLKSSENVFSHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSIGCEEHLDPAGTGSFYNEGEADIVVQHVFSLICAGVNPTAIMVQSPYVAQVQLLRDMLDELPEAIGTEVATIDSFQGREADAVIISMVRSNALGAVGFLGDSRRINVAITRARKHVAVVCDSSTICHNTFLARLLRHIRHFGRVKHAEPGHSGGSGLGMNPMLPSIK 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g2159 994 SMART ultradead3 516 769 IPR014001 -
Mibi07g2159 994 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 519 957 IPR027417 -
Mibi07g2159 994 Coils Coil 645 665 - -
Mibi07g2159 994 Gene3D - 304 752 IPR027417 -
Mibi07g2159 994 Coils Coil 621 641 - -
Mibi07g2159 994 FunFam DNA-binding protein SMUBP-2 isoform X2 323 454 - -
Mibi07g2159 994 MobiDBLite consensus disorder prediction 88 107 - -
Mibi07g2159 994 FunFam DNA helicase A 768 976 - -
Mibi07g2159 994 MobiDBLite consensus disorder prediction 58 107 - -
Mibi07g2159 994 Pfam AAA domain 520 736 IPR041677 GO:0004386
Mibi07g2159 994 Pfam AAA domain 746 949 IPR041679 -
Mibi07g2159 994 Gene3D - 323 454 - -
Mibi07g2159 994 MobiDBLite consensus disorder prediction 58 72 - -
Mibi07g2159 994 CDD SF1_C_Upf1 770 966 IPR041679 -
Mibi07g2159 994 CDD DEXXQc_SMUBP2 519 769 - -
Mibi07g2159 994 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 170 978 - -
Mibi07g2159 994 SMART AAA_5 535 750 IPR003593 -
Mibi07g2159 994 Gene3D - 768 976 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g2159 Mibi-ChrMibi07 45781363 45800131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g2159 511 709 Core DNA Replication Machinery Family AT1G08840 27.094 9.96e-09 57.8