Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g2154 ATGGGAGTTGTTAACTTTGAAATTAGTAGAAATTCAGCTTTTGCTTTACATTGTTATGGAAATTCCTTTTCTTCCGGTGTTACGACGTCTTGGAGACCCTTTCTTGGTACATCTTTAAATAGCAGAAGTGCAGGCAAAGGTCAAGTTTTTCATGTTCAGAGGCTTAATTATGAACCAGTTTGTGCTTCGTTGAAGAGTGGCCTTAGCGATGGGTTGATTAATGATAGTCTGCTTTCAAGTGAATCAGATTTTAAGCCATCATTCGATGATTATTTGAAGGAAATGGAATCTGCCAGAACTGTCAAGGAAAGGGAGTCCTCCAGAAATGTACTGGTAAAGAAGCATGCTACCAGTACCCAAAAACAGAAGAGGGAAAAGGTTATGTCGAGGAAACCAAGGTTGGAGGGAGTTGAAAAAAGTACAAAATTTGGAAAGCTTGTACGGCGCATGGATAAAGCAAATGAATTGGAAATTGCTGAAAAAAATGGGGCATTACAAGTAGTTGGAACAGTCATGGCCAAAGAAAGCTCTTCCGTTGGTCATATTAAGCTTCGAGGACGGGGAGCTAAAAGATTTGACCTTGAGTATGATGGGGAAGAAAGCAATCTTGATAGTACTGTGAAGGAGAAAAAGGAGGCAGAGGTAATGGAAGACAGGTGGTTGGGATACCGCGTTAATAAATCAAAACCAGATTCTGACAGCAATTTGATTAATAGGGAACATAGAAAGACAGGAAATAGCAAAGCTTCGCTCAATTGGAACCGTAACTGTGGCAACACCATAGATGGGGAAGTCGGCCGTAAACTACGTACAAAAAGGACGGCAGGAGTAAAGGCTGTTACAACCAGTCAAATAGGCTACAATTCAAAAGGGGAAATGCCTATATTAAACAAAACTGTTGTTAGCAACAATATTCTGCATAATGGACGTGAGAACAGATACGCAGAAAATGAGAGTGTGGGGAAAGAAAATAAAGCGGAAAATCTCAACTTGAATAGAAGAGGCAGATGTGCTGATTATGACAACTTGGAGGTGGAAAGAGCAGCGTTTAAGACTTTTGAAGAGTTCAACGGTGTTATTAACAAGCCACAGGTTTCACACAAGGAAATGGAGGATAGAATCCAAAGGCTGGCAAATATGTTGAATGGTGCTGATATAAATATTCCTGAATGGATCTTTTCTAAGATGATGAGAAGTGCAAAGATAAAATTTAATGATTACTCTATTGTGAGGGTTATCCAAAGATTGGGAAAACTAGGAAACTGGCAGAGGGTGATACAGGTCATTGAATGGCTTCAAAGGCGTGAGCGATTCAAATCCAATAAGCTAAGGCATATATACACTGCTGCTCTTGATGCACTTGGAAAGGCAAGGAGACCCGTAGAGGCACTAAATGTATTTCATGCCATGCTGCAACAAATGTCCACATATCCTGATTTGGTAGCTTACCATAGCGTTGCTGTCACTCTTGGACAAGCAGGGCGCATAAAGGAACTCTTTGATGTGATTGATATCATGCAGTCGCCACCTAAGAAGAAGTTCAAAGTAGGAGCACTTGGGAACTGGGACCCTAGGCTGGAACCAGATGTCATAGTTTATAATGCCGTCCTCAATGCTTGTATTCAGCAGAAACAGTGGGAAGGGGCTTTCTGGGTTTTACAGCAGTTAAAGAAGCAACATCAACAACCTTCTGCTGCAACTTATGGTCTTGTCATGGAGGTGATGTTTACATGTGGCAAGTACAATCTAGTTCATGATTTTTTCATGAAAGTTCAGAAGTCTTCTATTCCCAATGCATTGACATATAGAGTTCTTGTGAATACACTCTGGAAAGAGGGCAAAATTGATGAGGCTATTTTGGCTGTGCAAGATATGGAAAGACGTGGAATTGTAGGTTCTGCTTCTCTTTATTATGACCTTGCTCGATGTCTTTGTGCAGCTGGAAGATGTAGTGAGGCGCTGATGCAGATAGAGAAGATATGTAAGGTTGCAAACAAGCCACTTGTAGTGACATACACGGGCTTAATTCAAGCATGTCTGGAATCTGGAAACATCCAAAATGGGGCATACATTTTTGGAAAAATGAAGGATATTTGTTCCCCAAATCTTGTCACTTGTAACATGATGCTTAAAGCTTACCTGGAACATGGGATTTTTGAGGAAGCCAAAGAATTATTTGAGAAGATGTCAGAAAACACAAATCATGTGAAGAGAAATTCTGATTACAAAGTTGTGGTGATACCAGATATTTACTCATTCAACACCATGCTAGATGCATGTATTGTAGAGAAGAGATGGGACTATTTTAACCACGTCTATGGAAAGATGCTATACCATGGTTACCACTTCAATCCAAAACGTCATCTTCGAATGATTTTGGAGGCATCAAGAGCTGGAAAGGAAGGGCCTGTTGAAACGACGTGGAAGCACTTGATCCAAACGGATCGTATTATCCCAGCTACTCTAATAAAGGAGAGATTCTGTATGAAGCTTGAAAAGGATGATCATGTCGAAGCTCTTCGATGTATCACCAATGATCCTTCCAAAAAGGATTTGCAGGCATTTTCTAAGCTGTCTTGGTTGAATCTATTGAAAGAAAATGCCCAACGCTTTGAGAAGGATACACTAGTTAGGCTAATGGATGATGTAAACACCCTAGTTTCCAAAAGTAGCTTGCCACTTCCAGCACTTGAAGCACTTGAAAACCTAATGCTATCTTTGAAAGAATTTTGTGGCGCTGACCTTAGTGGGACTGACATCAAACAATTGGTTCACTCTAGACGAATTTGTGCGTAA 2796 0.4049 MGVVNFEISRNSAFALHCYGNSFSSGVTTSWRPFLGTSLNSRSAGKGQVFHVQRLNYEPVCASLKSGLSDGLINDSLLSSESDFKPSFDDYLKEMESARTVKERESSRNVLVKKHATSTQKQKREKVMSRKPRLEGVEKSTKFGKLVRRMDKANELEIAEKNGALQVVGTVMAKESSSVGHIKLRGRGAKRFDLEYDGEESNLDSTVKEKKEAEVMEDRWLGYRVNKSKPDSDSNLINREHRKTGNSKASLNWNRNCGNTIDGEVGRKLRTKRTAGVKAVTTSQIGYNSKGEMPILNKTVVSNNILHNGRENRYAENESVGKENKAENLNLNRRGRCADYDNLEVERAAFKTFEEFNGVINKPQVSHKEMEDRIQRLANMLNGADINIPEWIFSKMMRSAKIKFNDYSIVRVIQRLGKLGNWQRVIQVIEWLQRRERFKSNKLRHIYTAALDALGKARRPVEALNVFHAMLQQMSTYPDLVAYHSVAVTLGQAGRIKELFDVIDIMQSPPKKKFKVGALGNWDPRLEPDVIVYNAVLNACIQQKQWEGAFWVLQQLKKQHQQPSAATYGLVMEVMFTCGKYNLVHDFFMKVQKSSIPNALTYRVLVNTLWKEGKIDEAILAVQDMERRGIVGSASLYYDLARCLCAAGRCSEALMQIEKICKVANKPLVVTYTGLIQACLESGNIQNGAYIFGKMKDICSPNLVTCNMMLKAYLEHGIFEEAKELFEKMSENTNHVKRNSDYKVVVIPDIYSFNTMLDACIVEKRWDYFNHVYGKMLYHGYHFNPKRHLRMILEASRAGKEGPVETTWKHLIQTDRIIPATLIKERFCMKLEKDDHVEALRCITNDPSKKDLQAFSKLSWLNLLKENAQRFEKDTLVRLMDDVNTLVSKSSLPLPALEALENLMLSLKEFCGADLSGTDIKQLVHSRRICA 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g2154 931 FunFam Pentatricopeptide repeat-containing protein 372 518 - -
Mibi07g2154 931 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 529 563 IPR002885 -
Mibi07g2154 931 MobiDBLite consensus disorder prediction 228 251 - -
Mibi07g2154 931 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 702 732 IPR002885 -
Mibi07g2154 931 Gene3D Tetratricopeptide repeat domain 369 516 IPR011990 GO:0005515
Mibi07g2154 931 Pfam PPR repeat family 528 571 IPR002885 -
Mibi07g2154 931 PANTHER OS01G0674700 PROTEIN 47 912 IPR044645 GO:0009658
Mibi07g2154 931 MobiDBLite consensus disorder prediction 114 134 - -
Mibi07g2154 931 TIGRFAM PPR: pentatricopeptide repeat domain 704 732 IPR002885 -
Mibi07g2154 931 TIGRFAM PPR: pentatricopeptide repeat domain 446 479 IPR002885 -
Mibi07g2154 931 SUPERFAMILY TPR-like 518 732 IPR011990 GO:0005515
Mibi07g2154 931 Pfam Pentatricopeptide repeat domain 667 713 IPR002885 -
Mibi07g2154 931 Coils Coil 367 387 - -
Mibi07g2154 931 Gene3D Tetratricopeptide repeat domain 523 662 IPR011990 GO:0005515
Mibi07g2154 931 Gene3D Tetratricopeptide repeat domain 663 816 IPR011990 GO:0005515
Mibi07g2154 931 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 598 632 IPR002885 -
Mibi07g2154 931 Pfam PPR repeat 446 472 IPR002885 -
Mibi07g2154 931 Pfam PPR repeat 601 630 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g2154 Mibi-ChrMibi07 45681008 45694746 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g2154 479 759 Glycosyltransferase AT1G05670 22.535 9.03e-15 77.0