Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g2142 ATGACTTGTTTTCCTGTATTTTTTGGTAGAAGATCACATTCTTCAGCAAAGCTAGATCCAGATATTGAAGAAGAGTTTTCTGGTCTTCACAATGTCAGACTTTATACATACAAAGAACTGCGGATTGCCACTGAAGATTTTAGTCCTATTAATAAAATTGGAGAGGGTGGTTTTGGTTCTGTTTACAAGGGGCGGTTAAAAGGTGGGAAAGTTGCTGCTTTTAAAGTCCTTTCAGCTGAATCAAGACAAGGGGTGAGGGAATTCTTGACAGAGATTAAGGTTATCTCTGAAATAGAACACGAAAATTTGGTTAAGCTATATGGCTGTTGTGTGGAAGGAAATCACAGAATATTGGTCTACAATTACCTTGAGAACAACAGCCTCGCACAAACCCTTATAGGTGGAAGACATAGCAATATCCAATTCAATTGGCGAACACGGTCTAGAATATGCATTGGGGTTGCCCGTGGGCTTGCCTTTCTCCATGAAGAAGTAAGACCACATATTGTTCATAGGGACATAAAAGCAAGTAACATTCTTCTTGATAAAGACCTCACACCCAAGATTTCAGATTTTGGGCTTGCAAAACTGATTCCAGCAAACATGACCCATGTTAGCACACGCGTCGCAGGAACTATAGGTTACTTGGCACCAGAGTATGCAATAGGAGGCAAGCTGACACGAAAAGCTGATATATACAGCTTTGGAGTCCTCCTTGTGGAGATTGTAAGTGGGAGATGTAACACAAACACACGATTACCAGTTGAAGATCAGTACATTCTAGAGAGGACATGGGATCTTTACGAGCGGAAGGAATTGGTAACGCTGGTGGATGAATCACTGAATGGAGACTTTGATGCTGAGGAAGCTTGCAGGTTTCTTAAGATTGGCCTTCTTTGCACCCAGGATGACCCTAAGGTGCGGCCATCCATGTCTTCGGTAGTTAACATGCTCACTGGCAGACTGCGGGTCAACGAGAGGAACATAACAAAACCAGCCTTGATCTCTGATTTTATGGACCTCAAAGTGAGGAAAAAACCAGCGAGTAATCCGGACATGGAGACTCTGGCTTCATCATCTTCATACCATTCATCCTCGGCCTCATACAACCAGGATGCTACTTTCTCTTCAACTGTTTCAACTGCCGCAAATACCACTTTCACTGCCCGATATGATCAAAGCATGAGGGAGGAACGGGAGAGACGTGGTGACAATCGGAACATAGACTGTGTTTCGACTCTCGGGGTGGCCTCATTGCGCCGCCACGATCCTCCTTCATCTTCTTTTTCTGTTTTAGCTGCCATATCTTTTGCTTTTGCCGCTGCAGGCTTTACAATCCACCTTTACTTGCAAAAGGACCTTATGTCTAGCATAGAGGATAACAAAGAACAAGGAGTGAGTGTGAATACATCTGACAAGTCAGTTGATATGCCGTCGTCTCAGGAGGAGGATGAAGCTATAAAGAAAAAATATGGAGGGATGATGGCTAAAAAGCATCCACTTATATCCCCGGACCATGAACGTGCATACTTCGATTCTGCAGATTGGGCGCTTAACAAGCGAGATGGTGGAAAGCCAAAGGGACCACTTGAGGCTCTACGGCCGAAATTGCAGCCAACGCAGCAGCAAACACGTTACCGGAAATCTCCTTATGCTCCCTTGGATGAAGGGGGGAATATTTCACCGGAGGATGCACCTTCCAATGAGTAA 1710 0.4439 MTCFPVFFGRRSHSSAKLDPDIEEEFSGLHNVRLYTYKELRIATEDFSPINKIGEGGFGSVYKGRLKGGKVAAFKVLSAESRQGVREFLTEIKVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGRHSNIQFNWRTRSRICIGVARGLAFLHEEVRPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIGGKLTRKADIYSFGVLLVEIVSGRCNTNTRLPVEDQYILERTWDLYERKELVTLVDESLNGDFDAEEACRFLKIGLLCTQDDPKVRPSMSSVVNMLTGRLRVNERNITKPALISDFMDLKVRKKPASNPDMETLASSSSYHSSSASYNQDATFSSTVSTAANTTFTARYDQSMREERERRGDNRNIDCVSTLGVASLRRHDPPSSSFSVLAAISFAFAAAGFTIHLYLQKDLMSSIEDNKEQGVSVNTSDKSVDMPSSQEEDEAIKKKYGGMMAKKHPLISPDHERAYFDSADWALNKRDGGKPKGPLEALRPKLQPTQQQTRYRKSPYAPLDEGGNISPEDAPSNE 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g2142 569 CDD STKc_IRAK 53 320 - -
Mibi07g2142 569 FunFam cold-responsive protein kinase 1 18 122 - -
Mibi07g2142 569 MobiDBLite consensus disorder prediction 464 484 - -
Mibi07g2142 569 SMART serkin_6 47 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g2142 569 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 360 - -
Mibi07g2142 569 Pfam cAMP-regulated phosphoprotein/endosulfine conserved region 476 547 IPR006760 -
Mibi07g2142 569 SUPERFAMILY Protein kinase-like (PK-like) 26 318 IPR011009 -
Mibi07g2142 569 MobiDBLite consensus disorder prediction 518 569 - -
Mibi07g2142 569 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Mibi07g2142 569 FunFam cold-responsive protein kinase 1 123 334 - -
Mibi07g2142 569 Pfam Protein kinase domain 49 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g2142 569 Gene3D Transferase(Phosphotransferase) domain 1 123 360 - -
Mibi07g2142 569 Gene3D Phosphorylase Kinase; domain 1 19 122 - -
Mibi07g2142 569 ProSiteProfiles Protein kinase domain profile. 47 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g2142 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g2142 Mibi-ChrMibi07 45464839 45473565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g2142 6 326 Receptor kinase-like Gene Family AT1G07650 54.630 2.99e-109 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi07g2142 Pkinase 1.6e-46 CL0016