Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g2139 ATGAGCAATATAAGCATGGTGGAGGCCAAGTTGCCCCCAGGTTTCAGGTTCCATCCAAGAGATGAGGAACTTGTGTGCGATTACTTGATGAAGAAAGTCACTCACTCTGATAATTCCAATTCCACTCTCATGATTGATGTTGACCTTAACAAGTGTGAGCCTTGGGATATTCCAGAAAGGGCATGCGTAGGAGGGAAGGAGTGGTATTTCTACACGCAGAGGGACAGGAAGTATGCGACAGGGATGAGAACAAATAGGGCGACGGCGTCAGGGTATTGGAAGGCAACGGGAAAAGACAGAAATGTCGTCAGGAAGGGCAAAGTGGTTGGCATGAGAAAGACTTTGGTTTTCTATCAAGGAAGGGCTCCCAAAGGCACCAAGACCCACTGGGTCATGCATGAGTTTCGCCTTCACTCTCCTCCTCATCATCCTTCCCATTCTTTCCCCAAGGAAGACTGGGTGCTGTGTCGGGTATTCTACAAGGACAGAGAAGAAGAGAATGGAAAGGGAAATGGCATGGGAAGCTGCTATGAGGACGACACTGGTGGCTCTTCGTCTCTTCCAGAATTGATGGATTCTTCATACATAAGTTTTGATCAGCCTTCTACTTGTGATGCAGCTCTTCATCATAATCATTATGAGCAGCAAGTGCCCTGCTTCTCCACTCCTTCTTTAATCCCTCCTACTTCTACTACCCCCATTCATCACAACACCAACTTGTTATTGCCTCCATCTCCACTTTTTCATCACGACTCCCACGTCCTCAAATCCCTTTTGACACAACTCACCAAGATCCAAACTCATGAAGGATCCCCCACCACCTTTCAACCTCATGATCAACTGCCTATTAATATTCCCAACTATTTATGGAACAATCACTAA 882 0.4637 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHSDNSNSTLMIDVDLNKCEPWDIPERACVGGKEWYFYTQRDRKYATGMRTNRATASGYWKATGKDRNVVRKGKVVGMRKTLVFYQGRAPKGTKTHWVMHEFRLHSPPHHPSHSFPKEDWVLCRVFYKDREEENGKGNGMGSCYEDDTGGSSSLPELMDSSYISFDQPSTCDAALHHNHYEQQVPCFSTPSLIPPTSTTPIHHNTNLLLPPSPLFHHDSHVLKSLLTQLTKIQTHEGSPTTFQPHDQLPINIPNYLWNNH 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g2139 293 FunFam NAC domain-containing protein 100-like 20 165 - -
Mibi07g2139 293 ProSiteProfiles NAC domain profile. 11 161 IPR003441 GO:0003677|GO:0006355
Mibi07g2139 293 SUPERFAMILY NAC domain 2 161 IPR036093 GO:0003677|GO:0006355
Mibi07g2139 293 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Mibi07g2139 293 Gene3D NAC domain 20 166 IPR036093 GO:0003677|GO:0006355
Mibi07g2139 293 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g2139 Mibi-ChrMibi07 45443712 45446802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g2139 2 291 NAC Transcription Factor Family AT1G56010 54.859 1.75e-110 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi07g2139 NAM 1.8e-38 No_clan