Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g2129 ATGGTGAAGTTCACAGCTGAGGAGCTCCGTCGGATTATGGACCTGAAGCATAATATTCGTAATATGTCCGTTATTGCACATGTTGATCATGGAAAATCTACCCTCACCGACTCTCTTGTGGCGGCTGCTGGTATTATTGCACAAGAAGTTGCAGGTGATGTCCGGATGACTGATACCCGTCAAGATGAAGCAGAGCGAGGTATCACAATCAAGTCTACTGGCATTTCTCTCTACTACAAAATGAGTGATGAAGCTCTCAAGAGCTTCAAAGGTGAACGCAGTGGCAACGAGTATCTTATAAATCTGATTGACTCCCCTGGGCACGTGGACTTCTCATCTGAGGTCACAGCTGCACTTCGTATAACTGATGGAGCTCTAGTTGTGGTAGATTGTATTGAAGGTGTTTGTGTCCAAACTGAAACTGTGCTTCGACAGGCACTTGGAGAAAGAATTAGGCCTGTTTTGGCTGTGAATAAAATGGATAGGTGCTTCCTTGAGCTCCAGGTGGATGGAGAGGAGGCTTACCAAACATTTCAAAGGGTTGTTGAGAATGCCAATGTGATCATGGCTACATATGAAGATCCCCTCCTTGGTGATTGTCAGGTTTACCCAGAGAAAGGAACAGTTGCTTTTTCTGCGGGTTTGCATGGTTGGGCTTTCACCTTGACCAACTTTGCTAAAATGTATGCCTCTAAATTTGGAGTTGACGAGTCAAAGATGATGGAAAGGCTGTGGGGTGAGAACTTCTTTGATCCAGCTACCAAGAAATGGACCGGCAAGAATACTGGTTCGCCTACTTGCAAGCGTGGGTTTGTTCAGTTCTGCTATGAGCCTATAAAGCAGATGATTTTCACTTGTATGAATGATCAAAAGGATAAGTTGTGGCCTATGTTGCAAAAGCTTGGAGTCAACATGAAATCTGAAGAGAAGGACCTAATGGGTAAAGCATTGATGAAACGTGTCATGCAAACCTGGCTCCCAGCAAGCAGTGCCCTTTTGGAAATGATGGTATTCCATCTTCCCTCCCCATCAAGAGCCCAAAAATATCGTGTGGAAAACTTGTACGAGGGACCTCTTGATGATCAATATGCCACAGCAATCAGGAATTGTGATCCTGATGGGCCCCTAATGCTTTATGTCTCAAAAATGATTCCTGCATCCGATAAGGGTAGGTTTTTTGCTTTTGGCCGTGTCTTCTCTGGTAAGGTTTCCACGGGTTTGAAGGTCAGAATCATGGGACCAAACTATGTCCCTGGGCAGAAGAAGGACTTGTATGTTAAGAATGTGCAGAGAACTGTCATCTGGATGGGAAAGAAGCAAGAAACTGTTGAGGATGTGCCTTGTGGTAACACAGTTGCTATGGTTGGTCTGGATCAATTCATCACCAAAAATGCCACATTAACAAATGAAAAGGAAGTAGATGCCCATCCTATCCGAGCAATGAAGTTTTCTGTCTCACCCGTGGTACGTATTGCTGTTCAGTGCAAGGTTGCATCTGATCTTCCAAAGCTTGTCGAAGGTCTCAAACGGTTGGCCAAATCGGATCCTATGGTTATGTGTACTATGACAGAGTCTGGAGAGCACATTGTTGCTGGTGCAGGAGAACTTCACCTTGAGATCTGTTTGAAGGACTTGCAAGAAGATTTTATGGGCGGAGCGGAGATCATAAAGTCAGATCCTGTTGTGTCCTTCCGTGAAACTGTTCTAGAGAGATCTTGCCGTACTGTGATGAGCAAATCACCCAACAAGCACAACCGTCTGTACATGGAGGCAAGACCAATGGAGGAAGGTCTTGCAGAGGCAATTGATGAAGGCAAGATTGGACCCAAAGATGACCCCAAGAAAATCTGGTGTTTTGGACCTGAGACCATGGGACCTAACATGGTAGTAGATATGTGTAAAGGGGTTCAGTACCTGAATGAAATTAAGGATTCTGTTGTTGCTGGATTCCAGTGGGCATCAAGAGAAGGTGCATTGGCTGAAGAGAACATGAGGGGCATTTGTTTTGAAGTCTGTGATGTTGTTCTTCACGCTGATGCTATCCACAGAGGAGGTGGTCAGATCATTCCAACTGCAAGGAGGGTCTTTTATGCTTCACAATTGACCGGTAAGCCCAGGCTTCTTGAACCTGTTTACCTGGTGGAAATCCAAGCTCCCGAGCAGGCTCTTGGTGGAATCTACAGTGTTCTTAACCAGAAACGTGGACATGTGTTTGAGGAAATGCAGAGGCCTGGTACTCCAATTTATAACATTAAGGCATACCTACCTGTCATTGAGTCATTTGGGTTCTCAAGCACATTGAGGGCTGCAACATCAGGACAGGCTTTCCCACAGTTGGTCTTTGATCACTGGGATATGATGTCATCAGATCCACTTGAGCCTGGAACGCAGGCGGCACAGGTTGTTGCTGACATTCGCAAGAGGAAGGGCTTGAAGGAGCAGATGACTCCACTTTCAGAATACGAAGACAAGCTTTAA 2478 0.4544 MVKFTAEELRRIMDLKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYKMSDEALKSFKGERSGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLAVNKMDRCFLELQVDGEEAYQTFQRVVENANVIMATYEDPLLGDCQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTGKNTGSPTCKRGFVQFCYEPIKQMIFTCMNDQKDKLWPMLQKLGVNMKSEEKDLMGKALMKRVMQTWLPASSALLEMMVFHLPSPSRAQKYRVENLYEGPLDDQYATAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGQKKDLYVKNVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRIAVQCKVASDLPKLVEGLKRLAKSDPMVMCTMTESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEEGLAEAIDEGKIGPKDDPKKIWCFGPETMGPNMVVDMCKGVQYLNEIKDSVVAGFQWASREGALAEENMRGICFEVCDVVLHADAIHRGGGQIIPTARRVFYASQLTGKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPIYNIKAYLPVIESFGFSSTLRAATSGQAFPQLVFDHWDMMSSDPLEPGTQAAQVVADIRKRKGLKEQMTPLSEYEDKL 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g2129 825 SUPERFAMILY Translation proteins 343 476 IPR009000 -
Mibi07g2129 825 FunFam Translation elongation factor 2 343 484 - -
Mibi07g2129 825 Gene3D Translation factors 343 484 - -
Mibi07g2129 825 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 17 344 IPR000795 GO:0003924|GO:0005525
Mibi07g2129 825 CDD aeEF2_snRNP_like_IV 559 713 - -
Mibi07g2129 825 Gene3D - 3 237 IPR027417 -
Mibi07g2129 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 341 IPR027417 -
Mibi07g2129 825 SMART EFG_IV_2 591 704 IPR005517 GO:0005525
Mibi07g2129 825 CDD EF2 20 230 - -
Mibi07g2129 825 CDD EF2_snRNP_III 487 559 - -
Mibi07g2129 825 Pfam Elongation factor Tu domain 2 394 467 IPR004161 GO:0005525
Mibi07g2129 825 SUPERFAMILY EF-G C-terminal domain-like 484 560 IPR035647 -
Mibi07g2129 825 SUPERFAMILY EF-G C-terminal domain-like 709 820 IPR035647 -
Mibi07g2129 825 SUPERFAMILY Ribosomal protein S5 domain 2-like 562 708 IPR020568 -
Mibi07g2129 825 Pfam Elongation factor G C-terminus 706 792 IPR000640 -
Mibi07g2129 825 PRINTS GTP-binding elongation factor signature 21 34 IPR000795 GO:0003924|GO:0005525
Mibi07g2129 825 PRINTS GTP-binding elongation factor signature 65 73 IPR000795 GO:0003924|GO:0005525
Mibi07g2129 825 PRINTS GTP-binding elongation factor signature 153 162 IPR000795 GO:0003924|GO:0005525
Mibi07g2129 825 PRINTS GTP-binding elongation factor signature 101 111 IPR000795 GO:0003924|GO:0005525
Mibi07g2129 825 PRINTS GTP-binding elongation factor signature 117 128 IPR000795 GO:0003924|GO:0005525
Mibi07g2129 825 Pfam Elongation factor G, domain IV 610 702 IPR005517 GO:0005525
Mibi07g2129 825 CDD EF2_II 375 470 - -
Mibi07g2129 825 Gene3D - 570 703 IPR014721 -
Mibi07g2129 825 TIGRFAM small_GTP: small GTP-binding protein domain 20 176 IPR005225 GO:0005525
Mibi07g2129 825 CDD eEF2_snRNP_like_C 709 787 - -
Mibi07g2129 825 FunFam Translation elongation factor 2 3 237 - -
Mibi07g2129 825 SMART EFG_C_a 706 795 IPR000640 -
Mibi07g2129 825 Gene3D - 705 825 - -
Mibi07g2129 825 FunFam Translation elongation factor 2 705 825 - -
Mibi07g2129 825 Pfam Elongation factor Tu GTP binding domain 17 342 IPR000795 GO:0003924|GO:0005525
Mibi07g2129 825 Pfam Elongation Factor G, domain III 487 549 IPR041095 -
Mibi07g2129 825 FunFam Translation elongation factor 2 486 563 - -
Mibi07g2129 825 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 IPR031157 -
Mibi07g2129 825 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 8 824 - -
Mibi07g2129 825 Gene3D Elongation Factor G (Translational Gtpase), domain 3 486 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g2129 Mibi-ChrMibi07 45305814 45308773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g2129 1 825 Eukaryotic Initiation Factors Gene Family AT1G56070 89.680 0.0 1591