Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g2122 ATGGCTCTTTGGAGAGCTCGTGCTGCTTCGAATGCATTTTCCAGAATCACCAACTTCAACCTTGTCAAGCCTTTCTCCTTCAACAATGCTTCTCGCAATTTCTCTTCCGGTACTCACTCATCTTCTTCAAAACTGATTCATCTGTTAATATCCATTTGCATATATTATCAATCATTAAATTTCTTTGTTTCACTATTTACATTTGCAGATTCTGCAAATGCATCTTCTCGTAGTGCACATGAGAGTATAAAGAATCAAATGATGTTTTCTGACATAAATGCACAAATTGGGAGTTGCATGCCGATTAATGCTATGCGAATCGGGACAATTATTCATAACATTGAAATGAAACCTGGGCAAGGTGGCAAACTGGTCAGATCAGCTGGGACTTGTGCAAAGATATTGAAAGATCCTTCATCACGATATGTCTTAATTGAACTCCCTTCAAAGAAGACAAAGTTAATCGATTCTCGTTGCAGGGCTACGATTGGTAGAGTGTCTAATCCAACCCATGGAGATCGGGAGCTCAGGAAGGCCGGGCAGAGCCGGTGGCTTGGCCGAAGGCCGGTAGTTCGAGGAGTGGCCATGAATCCTGTAGACCATCCTCATGGAGGAGGAGAGGGTAAGAGTAAGAGTAGTGGAAAATATGGGAGAGTTTCTGTTTCTCCTTGGGGCAAACCAACCAAAGGTGGATATAAAACTGGCCCTCTGAAGCGTAAAAGGTAG 726 0.4298 MALWRARAASNAFSRITNFNLVKPFSFNNASRNFSSGTHSSSSKLIHLLISICIYYQSLNFFVSLFTFADSANASSRSAHESIKNQMMFSDINAQIGSCMPINAMRIGTIIHNIEMKPGQGGKLVRSAGTCAKILKDPSSRYVLIELPSKKTKLIDSRCRATIGRVSNPTHGDRELRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGKYGRVSVSPWGKPTKGGYKTGPLKRKR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g2122 241 FunFam 60S ribosomal protein L2, mitochondrial 90 166 - -
Mibi07g2122 241 MobiDBLite consensus disorder prediction 166 241 - -
Mibi07g2122 241 Gene3D Ribosomal protein L2, domain 3 167 241 IPR014726 -
Mibi07g2122 241 FunFam 50S ribosomal protein L2 167 241 - -
Mibi07g2122 241 SMART Ribosomal_L2_C_2 94 227 IPR022669 GO:0003735|GO:0005840|GO:0006412
Mibi07g2122 241 ProSitePatterns Ribosomal protein L2 signature. 189 200 IPR022671 GO:0003735|GO:0005840|GO:0006412
Mibi07g2122 241 Pfam Ribosomal Proteins L2, C-terminal domain 96 225 IPR022669 GO:0003735|GO:0005840|GO:0006412
Mibi07g2122 241 Gene3D - 85 166 IPR014722 -
Mibi07g2122 241 PANTHER RIBOSOMAL PROTEIN L2 84 239 IPR002171 GO:0003735|GO:0005840|GO:0006412
Mibi07g2122 241 SUPERFAMILY Translation proteins SH3-like domain 96 231 IPR008991 -
Mibi07g2122 241 TIGRFAM rplB_bact: ribosomal protein uL2 90 238 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g2122 Mibi-ChrMibi07 45202768 45205088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g2122 93 206 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 40.000 1.10e-21 89.0