Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g2121 ATGGCTGGGTTTTTGCCTGGTGATGCCCCTTGTAATGGAACACATGGTTTCCAAAGATACCCTGAGATGTCAGAGGATGGACCTGGTTGGTATTTTACGAGGAAGGAGATTGAAGAAAATTCACCATCCAAACGTGATGGTATAGATTGGAAGAAAGAGACCTACTTACGCAAATCATACTGCACATTCCTACAAGATTTAGGGATGAGACTGAAAGTACCTCAGGTAACCATTGCTACAGCAATAATTTTTTGTCATCGATTCTACCTTCGTCATTCCCTTGCGAGGAACGACCGGAGGATCATTGCAACAGTGTGCATGTTTCTTGCTGGGAAAGTTGAAGAGACACCTCGCCCTTTGAAAGATGTTATTCTTGTCTCGTATGAAATCATAAACAAGAAGGACCCTGTAGCTGCTCAAAGAATCAAACAAAAGGAGGTATATGAACAGCAGAAAGAATTAATCTTAGCTGGAGAGAGGATTGTTCTTCAAACTCTTGGTTTTGATCTTAATCTGCACCATCCTTATAAACCTCTTGTTGAGGCTATTAAAAAATTTAAAGTTGCTCAAAATGCTCTTGCTCAAGTTGCATGGAATTTTGTTAATGATGGACTTCGGACATGTCTTTGCCTGCAATTCCAGCCCCATCATATTGCGGCAGGAGCTATTTTTCTTGCTGCCAAGTTCCTTAAGGTGAAGCTCCCATCAGACGGGGAGAAGGTCTGGTGGCAAGAGTTTGATGTTACCCCTCGGCAATTGGAGGAAGTTAGTAATCAAATGTTGGAGCTATATGAACAAAACCGAGCGCCACCTTCAAATGACATTGAAGGGGCTACAGCAAGTGGGGCTGCTGTGAAGGTTCCTCCTAGCAATGATGAAAATGTGACCACAAACAGTAATTCTCATACTGGAGCTACGAGTTCAAGACTTGAAACCTCAAAGCCTGTAGCTTCTAAGGCAGTGTTTGAGTCATCAGCTAATCATGTTGGGCATCCTGTGCTGAATTATGGGGGCACAGAAATGAAACACAAGGTAGATGAAGCCAAGGGTAATTATCATCTTGAGGGTGAAGCCCTGCCACACAAGGAAAACTTGCAGGAAGCTCAAGACAAGTGGAGGTCTCAATCAGGTCATGGGGAAGAGCAAGAAAGCAATTTTGGGAGAAGTGAAATGAAGGAGGCTGCTGAGTTGAATGTTAAACATGCCAACAGAGATCCTGATCACAGAGATAGCACGTTGGGGCGGCCACCTCTAGAAACTATTAAAAAAATTGACAGAGACAAGGTAAAGGCTGCGCTAGAGAAACGTAGGAAAGCATCTGGTCATATAACTAAGAAAACAGAGGTTATGGATGATGATGATCTCATTGAGAGAGAACTTGAGGATGGAATTGAGCTGCCTGCTCAGAGTGACAAGAACAAGCAGGATAGGAGGCAGAACTGGTCTAAGCCCTCAGATAGATCGGATAATGGGAATATGCTGCTTGGAAGGCACCGGGATCATGCAGATGAACATCATCGTGGGGTAAAGGGCCTGCCATCATCTGAACCTGATCCAAGTATTGTTGAAGAAGGGGAGGTATCAGCTCTTGATGACATCGGCCCTGGACTTCTGTCACCCAAGTCAGGCAACCGCAAGAGGAAAGCTGGGAGCTCACCTGACAGAGAATTAGAGGGGAGACCTTATAACCCTCATTTGGAAGATCAGAACAAGGTCAGCCAGCTTGGTCATTCTGAGAGGGACAATAAGAGGCATTTACAGGAAAATCATGCTTGA 1776 0.4443 MAGFLPGDAPCNGTHGFQRYPEMSEDGPGWYFTRKEIEENSPSKRDGIDWKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFYLRHSLARNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIINKKDPVAAQRIKQKEVYEQQKELILAGERIVLQTLGFDLNLHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTCLCLQFQPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRAPPSNDIEGATASGAAVKVPPSNDENVTTNSNSHTGATSSRLETSKPVASKAVFESSANHVGHPVLNYGGTEMKHKVDEAKGNYHLEGEALPHKENLQEAQDKWRSQSGHGEEQESNFGRSEMKEAAELNVKHANRDPDHRDSTLGRPPLETIKKIDRDKVKAALEKRRKASGHITKKTEVMDDDDLIERELEDGIELPAQSDKNKQDRRQNWSKPSDRSDNGNMLLGRHRDHADEHHRGVKGLPSSEPDPSIVEEGEVSALDDIGPGLLSPKSGNRKRKAGSSPDRELEGRPYNPHLEDQNKVSQLGHSERDNKRHLQENHA 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g2121 591 FunFam Cyclin-T1-5 like 172 276 - -
Mibi07g2121 591 PANTHER CYCLIN 30 308 IPR043198 GO:0006357|GO:0016538
Mibi07g2121 591 FunFam Cyclin-T1-5 like 21 170 - -
Mibi07g2121 591 MobiDBLite consensus disorder prediction 364 591 - -
Mibi07g2121 591 MobiDBLite consensus disorder prediction 364 453 - -
Mibi07g2121 591 Gene3D - 20 170 - -
Mibi07g2121 591 SUPERFAMILY Cyclin-like 26 171 IPR036915 -
Mibi07g2121 591 MobiDBLite consensus disorder prediction 461 484 - -
Mibi07g2121 591 MobiDBLite consensus disorder prediction 492 512 - -
Mibi07g2121 591 Gene3D - 172 276 - -
Mibi07g2121 591 CDD CYCLIN 174 232 IPR013763 -
Mibi07g2121 591 CDD CYCLIN 56 127 IPR013763 -
Mibi07g2121 591 SUPERFAMILY Cyclin-like 173 270 IPR036915 -
Mibi07g2121 591 MobiDBLite consensus disorder prediction 290 312 - -
Mibi07g2121 591 Pfam Cyclin, N-terminal domain 33 171 IPR006671 -
Mibi07g2121 591 MobiDBLite consensus disorder prediction 284 312 - -
Mibi07g2121 591 MobiDBLite consensus disorder prediction 572 591 - -
Mibi07g2121 591 MobiDBLite consensus disorder prediction 547 565 - -
Mibi07g2121 591 SMART cyclin_7 177 262 IPR013763 -
Mibi07g2121 591 SMART cyclin_7 62 164 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g2121 Mibi-ChrMibi07 45189516 45194840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g2121 52 179 Core Cell Cycle Gene Families AT5G27620 27.344 1.92e-06 48.1