Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g2118 ATGCTTTCATGTCAACAACAACAACTATTTTCATGCTGTCTGATATACAGAAATTTGGTTGCTAACAACCTGACAATAGAAGGTTCAAACAGCAGTGGCCTTCCTTCTGGACTCAATTGTTTGCAGCAAAATTTTCCTTGTTTTCGTGGTGCTGCAGTATTCAGTAACAAACTTCCAGGCAGTACAAAGAACAGAACCGGTCTGATTGTGGGAATTGTTGTTGGTGTTGGAGTCCTAGGCTTTCTGTCTGTTCTAGCAGCTTTCTGTATCATTCAGAGAAGAAAGCGTCATGGGGATGGTGAAGAAGAGCTTTTAGGTATTGATACAAAGCCATACACTTTCAGCTATTCCGAGCTAAAGAATGCTACAGATGACTTCAATCCTGGCAAGAAATTGGGAGAGGGAGGTTTTGGACCTGTTTATAAGGGAACACTTAATGATGGAAGAGCAATTGCTGTGAAACAACTATCTGTAGGATCTCATCAAGGAAAGAGCCAGTTTATAGCTGAGATTGCAACCATATCTGCTGTGCAACATCGCAATCTTGTTAAATTATACGGATGTTGCCTTGAAGGAAATAAAAGACTTCTTGTCTATGAGTATCTAGAAAACAAGAGTCTTGATCAAGCACTATTCGAAAATTGCTTAACTCTGAACTGGCCCACACGCTATGATATCTGTATGGGTGTAGCTAGAGGTTTAGCTTATCTTCATGAAGAGTCTCGGCTCCGTATTGTGCACCGTGATGTAAAGGCTAGTAATATTCTTCTTGATCATGAACTTACCCCTAAAATATCTGATTTTGGTTTGGCCAAATTATACGATGATAAAAAGACCCATATAAGCACTCGTGTGGCTGGGACAATCGGATATCTAGCTCCAGAATATGCCATGCGTGGGCACCTCACAGAGAAAGCGGATGTATTTTCCTTTGGTGTTTTGGCCCTAGAGATAGTTAGTGGGAGGCCAAATTCTGATTCAAGCCTGGAAGGGGAGAAGATGTATCTTCTAGAATGGGCTTGGCAGCTGCATGAAAACAACTTTATATTTGGACTAGTAGATCCTAAACTATCAAAAGGTTTCAACGAGGAAGAAGTAAAAAGGATTGTAGGGATAGCTCTTCTGTGCACTCAATCATCACCATCATTAAGGCCAGCGATGTCCCGTGTTGTGGCGATGCTTACAGGAGATATTGAAGTGAGTGCTGTAACTTCAAAGCCTGGATACTTGACAGACTGGAAGTTTGATGATGTGAGCAGCTTCATGACTGGCTTGGCCACAAGGGGATCAGAGACAACTCAATATAGCTCATCCACAAGTACCAGCACAGTCAGTGTTGCAAACCAGTCACCTGGAGATGCTTCTAAACCCATCCTTCGTCAGATTATTAGTGAAGGTAGGTGA 1404 0.4202 MLSCQQQQLFSCCLIYRNLVANNLTIEGSNSSGLPSGLNCLQQNFPCFRGAAVFSNKLPGSTKNRTGLIVGIVVGVGVLGFLSVLAAFCIIQRRKRHGDGEEELLGIDTKPYTFSYSELKNATDDFNPGKKLGEGGFGPVYKGTLNDGRAIAVKQLSVGSHQGKSQFIAEIATISAVQHRNLVKLYGCCLEGNKRLLVYEYLENKSLDQALFENCLTLNWPTRYDICMGVARGLAYLHEESRLRIVHRDVKASNILLDHELTPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVLALEIVSGRPNSDSSLEGEKMYLLEWAWQLHENNFIFGLVDPKLSKGFNEEEVKRIVGIALLCTQSSPSLRPAMSRVVAMLTGDIEVSAVTSKPGYLTDWKFDDVSSFMTGLATRGSETTQYSSSTSTSTVSVANQSPGDASKPILRQIISEGR 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g2118 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Mibi07g2118 467 FunFam Putative LRR receptor-like serine/threonine-protein kinase 202 406 - -
Mibi07g2118 467 Gene3D Phosphorylase Kinase; domain 1 100 201 - -
Mibi07g2118 467 Pfam Protein tyrosine and serine/threonine kinase 129 393 IPR001245 GO:0004672|GO:0006468
Mibi07g2118 467 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 59 432 - -
Mibi07g2118 467 SUPERFAMILY Protein kinase-like (PK-like) 109 419 IPR011009 -
Mibi07g2118 467 FunFam Leucine-rich repeat receptor-like protein kinase 96 201 - -
Mibi07g2118 467 ProSiteProfiles Protein kinase domain profile. 126 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g2118 467 SMART serkin_6 126 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g2118 467 MobiDBLite consensus disorder prediction 432 453 - -
Mibi07g2118 467 Gene3D Transferase(Phosphotransferase) domain 1 202 406 - -
Mibi07g2118 467 CDD STKc_IRAK 132 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g2118 Mibi-ChrMibi07 45162288 45169363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g2118 18 56 Receptor kinase-like Gene Family AT1G56120 58.974 8.85e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi07g2118 PK_Tyr_Ser-Thr 1.8e-48 CL0016