Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g2053 ATGCGCCATATTCACTATTTTCTTCGGTTGGTGCATAAACCAAGGAAGCTAGCTACTTCTTCACTAGCCTTCCTTCTCCTACCTCCTTCTCCCATTCCCAAGGCTAGGGTTTCTTCTTCAATGGCCGCCTCTTCTTTGTTGAGATCTCCCCTCCTTTCTTCCTCTCCTTCTGATGGCTTTAAGGTGTCGTGCAATGTCTCCAGTAGCAATCTAAAATGTTTGAAGTTACAGTCTAACATTTTTGGAACTTCTCTCCCCAGTGAATCATTAGTCATACAGAACTGCAATGTCCGGGGTATCCAACCTATCAAAGCCACAGTTACTGAAATTCCTCTCCCCATACAGAAATCAAAGAGTGATGGGAAGACCAGGATTGGAATTAATGGTTTTGGTCGAATTGGAAGGCTGGTGTTGCGGGTAGCTACTTCTAGGGATGATATTGACGTTGTAGCGATTAATGATCCTTTCATTGACACCAAATATATGGCGTACATGTTTAAGTACGATTCTACTCATGGACCGTTCAAGGGATCCATTCAGGTTTTGGATGATTCCACCTTGGAGATTAATGGAAAGAAAATAAAAGTGGTGATGAAAAGAGACCCTGCAGAGATTCCATGGGGTGAATATGGGACTGATTTTGTTGTTGAGTCTTCTGGAGTTTTTACAACAATGGAAAAAGCCTCAGCACATTTGAAGGGTGGTGCCAAGAAAGTTGTAATCTCAGCTCCATCGGCAGATGCCCCAATGTTTGTGGTTGGAGTGAATGAGAAGATATACAAACCAAACATGGATATTGTTTCCAATGCTAGTTGTACTACAAATTGTCTTGCCCCACTTGCCAAGGTGGTTCATGAGGAGTTTGGTATAGTTGAAGGTTTGATGACGACTGTTCATGCAACAACAGCAACACAGAAGACTGTAGATGGCCCCTCAATGAAGGATTGGAGAGGAGGACGAGGAGCTGGTCAAAACATAATTCCTAGTTCAACTGGTGCCGCTAAGGCTGTTGGAAAAGTTCTTCCAGCTCTTAATGGAAAGCTAACTGGGATGGCATTCCGTGTACCTACACCCAATGTTTCTGTTGTGGACCTAACTTGTCGACTTCAAAAAAGTGCTTCCTATGAAGATGTCAAAGCTGCAATAAAGTATGCCTCAGAAGGACCACTTAAAGGCATTCTTGGATACACAGATGAGGATGTCGTCTCTAATGACTTTGTTGGCGATTCAAGGTCAAGTATTTTTGATGCTAAGGCTGGGATTGGTCTTAGTGCATCTTTTATGAAGCTTGTTTCTTGGTATGACAACGAGTGGGGATACAGCAACCGAGTGTTGGACCTTGTACAGCACATGGCATTTGTAGGGGCTCGCAACTGA 1377 0.4343 MRHIHYFLRLVHKPRKLATSSLAFLLLPPSPIPKARVSSSMAASSLLRSPLLSSSPSDGFKVSCNVSSSNLKCLKLQSNIFGTSLPSESLVIQNCNVRGIQPIKATVTEIPLPIQKSKSDGKTRIGINGFGRIGRLVLRVATSRDDIDVVAINDPFIDTKYMAYMFKYDSTHGPFKGSIQVLDDSTLEINGKKIKVVMKRDPAEIPWGEYGTDFVVESSGVFTTMEKASAHLKGGAKKVVISAPSADAPMFVVGVNEKIYKPNMDIVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAGQNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTPNVSVVDLTCRLQKSASYEDVKAAIKYASEGPLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLVQHMAFVGARN 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g2053 458 TIGRFAM GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 124 446 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Mibi07g2053 458 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 271 434 - -
Mibi07g2053 458 Gene3D Dihydrodipicolinate Reductase; domain 2 272 438 - -
Mibi07g2053 458 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 123 292 IPR036291 -
Mibi07g2053 458 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 277 434 IPR020829 GO:0016620
Mibi07g2053 458 Gene3D - 124 451 - -
Mibi07g2053 458 FunFam Glyceraldehyde-3-phosphate dehydrogenase 123 282 - -
Mibi07g2053 458 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 124 224 IPR020828 GO:0051287
Mibi07g2053 458 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 390 405 IPR020831 GO:0016620
Mibi07g2053 458 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 350 367 IPR020831 GO:0016620
Mibi07g2053 458 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 266 284 IPR020831 GO:0016620
Mibi07g2053 458 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 293 309 IPR020831 GO:0016620
Mibi07g2053 458 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 231 244 IPR020831 GO:0016620
Mibi07g2053 458 SMART gp_dh_n_7 123 272 IPR020828 GO:0051287
Mibi07g2053 458 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 270 277 IPR020830 GO:0016620
Mibi07g2053 458 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 122 452 IPR020831 GO:0016620
Mibi07g2053 458 FunFam Glyceraldehyde-3-phosphate dehydrogenase 271 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g2053 Mibi-ChrMibi07 43461587 43466820 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g2053 07 43461587 43466820 Mibi07g2053 07 43461587 43466820 ECH