Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g2040 ATGTTCCCTCCAAAGAAAGCCTCATCTATGAATTCTCAAGAGAGAGGCATGTGTGTTCAGCCTGATACTGGCCTTGTCCTCACCACTGATCCCAAGCCTCGCCTTCGTTGGACCTCTGAGCTCCATGAACGCTTCGTCGATGCGGTCACCCAACTCGGAGGCCCTGATAAGGCTACACCGAAGACGATCATGAGGGTGATGGGTGTGAATGGTTTAACGCTTTACCACTTAAAGAGTCATCTTCAGAAATTTAGGCTTGGAAAGCAGCCCCACAAGGACTTCAATGATCATAATTCCATCAAGAATGCTTCAGCTTTAGAACTTCAACGAAATTCTGCCTCCTCTTCCGCCATGATCGGTCGCAATATGAACGAGATGCAAATGGAGGTGCAGAGACGACTTCACGAACAACTAGAGGTTCAGAAACATCTTCAGCTGAGGATTGAGGCTCAAGGGAAATACATGCAAAGCATATTAGAGAAGGCTTATCAAACACTTGCTGGTGAAAATATGAAGAACAATAATATTAATGGAGCTCATCATCTTCAAGCCAATATGATGCCCCCTCAAGATTTCACTTCAATCCCTCTCAACCCTAATTTTTCTTCTTCTTTTCAAGATCAGCTTAACATCTATGGTGGTGATCAGCTTGATCATCATCATCTTCATCCCCATCAGTTCATGCCAAATAGCAGCAATAACACTGATCAAAATCTGTGTGTTCTGGGGATGAATAATAATAACAACAATAACAAGAACAAGAGGCCTTTGATTTGGAACAATGAAGATCATCATCATCATCTGGGAGGAATTGCATCATCTTCGTGTCTTGATACTGATCCTTTTAAGGATGTTGTTTCATTTGATAGAATCACAAGTAGTTCTGAGAATAACATTAATATTGATCATATTTCAGACATTTATGACACCAAGCCTTTACTTCATCAAGTAGATGAGGACACTTTAGAGGATACTATCACTGATCATAAGAAGCTTGAAAGGCCTTCACCAAAAAGGGCACATCATTCCCTTCACCAAGCAGATCAAAGGATGAGTCCTATGATTAGCACCGGTACACCATTCTAG 1086 0.4171 MFPPKKASSMNSQERGMCVQPDTGLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRVMGVNGLTLYHLKSHLQKFRLGKQPHKDFNDHNSIKNASALELQRNSASSSAMIGRNMNEMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMKNNNINGAHHLQANMMPPQDFTSIPLNPNFSSSFQDQLNIYGGDQLDHHHLHPHQFMPNSSNNTDQNLCVLGMNNNNNNNKNKRPLIWNNEDHHHHLGGIASSSCLDTDPFKDVVSFDRITSSSENNINIDHISDIYDTKPLLHQVDEDTLEDTITDHKKLERPSPKRAHHSLHQADQRMSPMISTGTPF 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g2040 361 SUPERFAMILY Homeodomain-like 31 87 IPR009057 -
Mibi07g2040 361 MobiDBLite consensus disorder prediction 329 346 - -
Mibi07g2040 361 MobiDBLite consensus disorder prediction 329 361 - -
Mibi07g2040 361 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 11 246 IPR044848 GO:0003700
Mibi07g2040 361 Pfam Myb-like DNA-binding domain 35 83 IPR001005 -
Mibi07g2040 361 Pfam MYB-CC type transfactor, LHEQLE motif 126 165 IPR025756 -
Mibi07g2040 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 89 IPR017930 -
Mibi07g2040 361 FunFam Myb family transcription factor 31 89 - -
Mibi07g2040 361 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 32 87 IPR006447 GO:0003677
Mibi07g2040 361 Gene3D - 31 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g2040 Mibi-ChrMibi07 43130430 43132383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g2040 1 340 G2-like Transcription Factor Family AT1G79430 53.371 7.77e-107 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi07g2040 Myb_DNA-binding 1.5e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g2040 07 43130430 43132383 Mibi07g2040 07 43130430 43132383 ECH