Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g2038 ATGGCTCCAACCGGTACTACTCTTCCTCCTGGATTCCGGTTCCATCCAACAGATGAAGAACTTGTTTCTTACTACTTAGAAAGAAAGATAACAGGTCGCTCAATAGAGCTTCACATAATCCCTGAAGTTGATCTATACAAACATGAACCTTGGGATTTGCCAGAAAAGTCACTGTTGCCAAGTAAAGATATGGAGTGGTACTTCTACAGTCCAAGGGATAGAAAGTATCCAAATGGGTCAAGAACTAATAGGGCAACAAGAGCTGGTTATTGGAAAGCTACAGGGAAAGATAGGTATGTGACTTCTCATCAAAAGCGGTCTGCTGTTGGGGTGAAGAAGACTTTGGTGTATTATAGAGGTAGAGCTCCTCATGGCATCAGAACCAATTGGATTATGCATGAGTATCGCCTTATTGATTCACAACCTCTCTATGTTTTCCCATCTTTGAAGGATTCATACTCATTGTGTCGCGTTTTCAAGAGGATGATCCAAACCTCGGAATCACCTAATAAAGAAGACAAAACTAAGGAGGCAAAGAAGAAATTTGTAGGACCAGAAGAGGAAGAAGATCATAAAGTTGTAAATTATCATGAATATGCTATTAAAGTTCGTAATTATGATGCTTCTTGTTCGGATCTCACTCAAGGAACTCAAACTGAAACTGGCATGGTAGATGATTTTCAAGCACAATTCGCTTGTGATGAGGCAAACAGTGCAGCTAATAATAAGTATTCTCTGGGCATAATGGAGAACCCATTAAATCTGTTTCAGAATATACAGGCGCCTATTTATGGAAGCATGCATGATGAAGTTGCAGCAGACACAGTACCTTTGGAGCATTTGGAGATGGAAGGTTTGCCTCAGATGAATTCGTTAGAGACAAAACCATCTTTAACGAAGCCTGAAATAATAAGTAGCCAATGCGTTTTATACGACAAATACAAAGATTGTACCTTTGGAACCCTGGAAGAGATCGTCTCTTTGTGTTCCTCTCAAGATATACATAATTTTAATTAG 1017 0.3943 MAPTGTTLPPGFRFHPTDEELVSYYLERKITGRSIELHIIPEVDLYKHEPWDLPEKSLLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRYVTSHQKRSAVGVKKTLVYYRGRAPHGIRTNWIMHEYRLIDSQPLYVFPSLKDSYSLCRVFKRMIQTSESPNKEDKTKEAKKKFVGPEEEEDHKVVNYHEYAIKVRNYDASCSDLTQGTQTETGMVDDFQAQFACDEANSAANNKYSLGIMENPLNLFQNIQAPIYGSMHDEVAADTVPLEHLEMEGLPQMNSLETKPSLTKPEIISSQCVLYDKYKDCTFGTLEEIVSLCSSQDIHNFN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g2038 338 SUPERFAMILY NAC domain 6 160 IPR036093 GO:0003677|GO:0006355
Mibi07g2038 338 Gene3D NAC domain 17 164 IPR036093 GO:0003677|GO:0006355
Mibi07g2038 338 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 218 - -
Mibi07g2038 338 ProSiteProfiles NAC domain profile. 8 161 IPR003441 GO:0003677|GO:0006355
Mibi07g2038 338 FunFam Nac domain-containing protein 86 17 164 - -
Mibi07g2038 338 MobiDBLite consensus disorder prediction 166 186 - -
Mibi07g2038 338 Pfam No apical meristem (NAM) protein 9 137 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g2038 Mibi-ChrMibi07 43105421 43108876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g2038 1 247 NAC Transcription Factor Family AT3G17730 54.000 2.87e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi07g2038 NAM 1.5e-39 No_clan