Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g2012 ATGCAAAGCCTGAGCCGCTATCAAGATTGTTGCCATTCTGAGTTTAGGTTTGTCATGAAATCAGAGCTACCCAGCAAGAAAATGGTTTCTGAAAATCCTGCTCCTCAAGCTATCTCATCTACAGTAACCACAGGAATCACAAAAGGTCTTCCTTTGCCTTCAACTTCAAGGACCAATAACCATGGTTATGGCAGTGGCAATAGTTCTCGTAGTAACAGTTTAGAAAGCACAAGTAATGCACCCATTAAGCCACATACTGGTGGTGATGTAAGGTGGGAGGCCATTAACATGATTTCTAAAGGAGCCTCTCTTGATCTTAAACATTTTCGGATTCTCAAGCGAATCGGCTATGGGGATATTGGGAGTGTGTATCTTGTAGAACTCAAAAAAACCAAGACTTATTTTGCCATGAAAATAATGAAAAAGGAAGCTCTTATAAGCAGGAATAAACTACTAAGAGCACAGACAGAGAGGGAGATTCTTCAACTTCTGGACCACCCTTTCTTGCCCACTCTTTATTCTTACTTTGAAAATGATAAGGTCTATTGTTTGGTCATGGAATTCTGCAGTGGAGGTAACCTTCACTCCCTTCGCCAGAAGCAGCCAAACCAGCATTTTACAGAAGAAGCAGCACGGTTTTATGCTTCAGAGATATTGTTAGCTCTTGAGTACCTGCATATGCTAGGCATAGTGTACAGAGACTTGAAGCCAGAGAATGTGCTAGTCAGAGATGAGGGCCATATAATGCTCTCAGATTTCGATTTATCCCTTCGCTGCTCAGTCAATCCTACACTCATCAAGTCTTCATCTGTCCATGCAAGTGGCAGCAGCAATGGCAGTAGTAGTGGTTCTGGGGTTATTTTGGAAGATCAGCAAACAGTGCAGACCCAGCCATCAACTTTCTTCCCACGCATTCTACCAATAAAGAAAAACCGAAAAACAAAGTCAGATTTCGGCCTCTTTAATGGAGGAACTGCCCTCCCTGAATTCATGGCAGAGCCTTCAGATGTGAGGTCAATGTCCTTTGTAGGGACACATGAATACCTTGCACCTGAAATCATCAGAGGAGAAGGTCATGGAAGTGCAGTAGATTGGTGGACATTCGGGATCTTCTTGTACGAGCTTTTACACGGAACAACACCCTTCAAAGGCGCCGGAAATAGGGCTACACTTTCCAATGTTGTAGGACAGCCCTTAAGGTTTCCAGATACTACACAGATAAGTTCTGCAGCAAAGGACCTTATCAAAGGATTGCTAGTGAAGGAACCTCCAAAGCGTATTGCATATATAAGGGGTGCCCCAGAAATAAAACAGCACCCATTTTTTGAAGGAGTGAATTGGGCTCTAGTTAGGAGTGCCCTGCCTCCTCATATACCAGATCCTGTAGATTTCACTAAGTATGCTAGCAATGATACAGCAGAAGCAGCAGACAAGGTGATAGATATTGCAAAAGATAAAAATGCTCCATATAGTCCTGCTAATTGTCCTTACATGGATTTTGAGTATTTTTAA 1512 0.4266 MQSLSRYQDCCHSEFRFVMKSELPSKKMVSENPAPQAISSTVTTGITKGLPLPSTSRTNNHGYGSGNSSRSNSLESTSNAPIKPHTGGDVRWEAINMISKGASLDLKHFRILKRIGYGDIGSVYLVELKKTKTYFAMKIMKKEALISRNKLLRAQTEREILQLLDHPFLPTLYSYFENDKVYCLVMEFCSGGNLHSLRQKQPNQHFTEEAARFYASEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVNPTLIKSSSVHASGSSNGSSSGSGVILEDQQTVQTQPSTFFPRILPIKKNRKTKSDFGLFNGGTALPEFMAEPSDVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGNRATLSNVVGQPLRFPDTTQISSAAKDLIKGLLVKEPPKRIAYIRGAPEIKQHPFFEGVNWALVRSALPPHIPDPVDFTKYASNDTAEAADKVIDIAKDKNAPYSPANCPYMDFEYF 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g2012 503 SUPERFAMILY Protein kinase-like (PK-like) 102 465 IPR011009 -
Mibi07g2012 503 FunFam Serine/threonine-protein kinase AGC1-7 335 460 - -
Mibi07g2012 503 Pfam Protein kinase domain 110 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g2012 503 Pfam Protein kinase domain 329 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g2012 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Mibi07g2012 503 CDD STKc_phototropin_like 107 463 - -
Mibi07g2012 503 MobiDBLite consensus disorder prediction 32 83 - -
Mibi07g2012 503 Gene3D Transferase(Phosphotransferase) domain 1 193 262 - -
Mibi07g2012 503 FunFam serine/threonine-protein kinase D6PK-like 193 260 - -
Mibi07g2012 503 Gene3D Transferase(Phosphotransferase) domain 1 335 460 - -
Mibi07g2012 503 PANTHER FLIPPASE KINASE 1-RELATED 47 468 - -
Mibi07g2012 503 ProSiteProfiles Protein kinase domain profile. 109 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g2012 503 MobiDBLite consensus disorder prediction 28 85 - -
Mibi07g2012 503 SMART serkin_6 109 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g2012 503 Gene3D Phosphorylase Kinase; domain 1 107 192 - -
Mibi07g2012 503 FunFam Serine/threonine-protein kinase D6PK-like 107 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g2012 Mibi-ChrMibi07 42334965 42338556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g2012 74 503 AGC Kinase Gene Family AT1G79250 71.778 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mibi07g2012 Pkinase 4.7e-39 CL0016