Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g2004 ATGCCAGGAAGTGGACAAGTGACAGTTCCTCCAGGTTTCAGGTTTCACCCAACAGATGAAGAACTTCTTTACTATTACCTGAGGAAGAAGGTCTCTTACGAAGCCATTGACCTTGACGTCATTAGAGAAGTTGATCTTAACAAACTTGAGCCTTGGGACCTCAAAGACAAGTGTAGAATTGGGTCAGGACCACAAAACGAGTGGTATTTCTTCAGCCATAAGGACAAGAAGTACCCAACAGGAACAAGAACGAATAGGGCGACCACAGCTGGGTTTTGGAAGGCCACAGGAAGAGATAAGGCCATTTATCTCACTAATTCCAAGAGGATTGGCTTGAGAAAAACCCTTGTCTTCTACACTGGTCGTGCTCCTCACGGCCAAAAGACCGATTGGATCATGCATGAGTATCGTCTTGACGAAGATGACCTCCAAGTTCAGGAAGATGGGTGGGTAGTGTGTAGGGTTTTCACAAAGAAGAACCTGAATAGAGGCTACCAAACATCAGAAAAGGAAGAGGAAGAAGAGTACTTAGCATCACAAATGAGAACAAAAAGTGGATCAAACCATCAGCAAGTACTATTAGACCCAAAACAACACTACCATCATCACATGCAAGCACTATATGATCATCATCATCATCACTATAGCCTTGATGGATCATCAATACAACAACACCTACCCCAATTGTTCAGCCCTGAATCCGCCACCATGGACCAAGTGGTAGAGTGCTCTCAAAACTTGTTAAGGCTCACAAATAGTACTAGTGGTGCTAGTAATAATGGCTGTGGACTCAATCTTAATCTGAATCATTATACTGACGATCACTGGTCATTCTTGGACAAGCTTCTTGCTTCACATAACCACCATAATGTTGGTGTGGCTGCTTCTTCAACCCAGAAATTCCCATCTTCTTCTGTTCATTACCTTGCTGGTGGTGACGCTCGTGACATTGTCAGGTTCTCTAAGTAG 969 0.4365 MPGSGQVTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLTNSKRIGLRKTLVFYTGRAPHGQKTDWIMHEYRLDEDDLQVQEDGWVVCRVFTKKNLNRGYQTSEKEEEEEYLASQMRTKSGSNHQQVLLDPKQHYHHHMQALYDHHHHHYSLDGSSIQQHLPQLFSPESATMDQVVECSQNLLRLTNSTSGASNNGCGLNLNLNHYTDDHWSFLDKLLASHNHHNVGVAASSTQKFPSSSVHYLAGGDARDIVRFSK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g2004 322 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Mibi07g2004 322 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Mibi07g2004 322 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Mibi07g2004 322 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 227 - -
Mibi07g2004 322 Coils Coil 320 322 - -
Mibi07g2004 322 FunFam NAC domain-containing protein 18 162 - -
Mibi07g2004 322 Pfam No apical meristem (NAM) protein 10 138 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g2004 Mibi-ChrMibi07 42199140 42201357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g2004 1 285 NAC Transcription Factor Family AT1G79580 57.827 9.38e-114 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi07g2004 NAM 1.2e-37 No_clan