Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1976 ATGGGAGGTTCAGGAAAAACAGCTTTAGCAACCCATATATATGAAAAGCTTTTAGAAGAAGCTGACACTGAACTTGTTTGGGTAACTGTATCACAAAATAGCATCTCTCACTTACAAAAAGTCGTAGCTAAATCAATTAAGTTGGATGTATCTGGTGAGTTGGAGGAAAAAATAATTGCAAGAAAACTGTTTCAAGCATTCAAAGAGATGAAAAAGCGTGTTGTTGTTATTTTAGATGATGTTTGGGATCATTTCTTTCTAAAGGAGGTTGGATTCCCAATGTCAGATAATCGAATCACAATCATTTTGACAAGTCGTATATGGGATGTGTGTCAAGGTATGGATTGCAAGGAGAATATAATAGAAGTGGAATCTCTAGGTGGTGAAGATAGTGTTGCTTTGTTCGAAAAGTTTATGGAACTCCATGATGGAATGTCTCTGGAAATGAAAGAAATTGCAAGGGATTTGTCAGATAAATGCATGGGTTTGCCCCTTGCTATTGTTAGAATTGCAACAAGTATGAAGGGGAAAACACAGGCTAGCAAATGGAGTCATATGTCGGATTGTCTTGAAAACTTGGGTTATGGGCAATATGAAATGGACAAATGGGTACTTCCAGTCTTGAGATCCAGCTATGATTTCTTAAATAAAAAATTGCAAAGATTCTTCTTGTGTTGTGCCTTAAGTATTTATGGACTTTCTGATGATGAGGATGTTAACCATTTGATAAGAAGATTTTCTTATGAAAGCATGGATGAGACAAAGAAGTGGACGGTGCAGTACAATGAAGGTTACAACATGTTAGATAAACTAAAGAATCATAGTATGTTGAAGCGATGTGGTGATTTTGGATGGACAATACACGCATTTGTTAGATTTATGGCTATCGGTATTGCAGAAAACACTGGTAAAATTATGGCAAATGCTTACAAGGAATTGACAGGAATACCAAGTGATGACCAATGGAAAGAAGATCTTCAAGAAGTTTTTCTGATGGGAAACTGGATAAAGACAATTCCAAATGGCACACGTCCAAGGTGTTCTCAACTCTCAACATTGCTTTTTGATCGTAATGAAAATCTCAACTATATACCAAATGATTTTTTCGACAATATGCCTGTCCTCAAGACACTTGATCTGTCTTATACTAGTATCGAGAGTTTGCCTGAATCTGTTTCAAGCTTGAAATGTCTTATTGCATTGTTACTCTCAGGATGCAGGGAACTGAGTTTCATTCCTTCATTAAGAGAATTGAAGCGATTAATAGCACTAGATGTATCTTATACTGCCATCAAGGAAGCACCTAGGGGCTTGGAAGCATTGGTCAATCTGAGATGCCTAAATCTGCTTGACACATATTTCGATACGCCAGCACCTACGGGCTTGGATTGGGTCACAGGACCTGGGGGTATACAAAATTTAGAAAAGTTGGAAGTTATAGTAGCCCGCTTTGGTGACATTAGCGTCTTCAATAGCTCTATGAGCTTCCTGGACAAAAAGTGTGCACTTTGGAGCTTTGATTTAACTTTAGAGGGTTCAGGATATGATCCTAATTATGCTGACGATGAAAGAACTGGAGAACGTTCCGTGAAAAGGATAACTTTTGACGGTGTGGATTTGGGAAATGGAGTAGCAATACTCTTAGGAGACATCAAGGAGTTGATCATAAAGTGTTGCAACCAAGAGACATGTGTTAGAGACCTATGCAAGTTTTTATCATATGACAAGAATAGCAATAATCCGCACCAAATTGAACGGTTGGATATTAAGAGGTGTGAAGTCGGTGATTGTGAGGAGATGAAAGAAATAGTTGGAGAAGATCATTCTGAAAAGGAACCTACTGCTAGTGGCAAACGTTCTCACCCTCCTCTTATCACTCTTCCAAACTTGACATCTATGAAATTATGGTTCATGCCACAATTAAATTACCTATACAGAGGCGTCTTACTCTGCCCTTCTCTCCAAACATTCTCTGCTTGGGGCGTGTGTGAGCAACTAGATCCTCCTCGAATAAAGATCTCATCAGATGGATGCCTGCTTCCCATGAAGAAGACCGGATTTGGATACCATTAG 2073 0.3864 MGGSGKTALATHIYEKLLEEADTELVWVTVSQNSISHLQKVVAKSIKLDVSGELEEKIIARKLFQAFKEMKKRVVVILDDVWDHFFLKEVGFPMSDNRITIILTSRIWDVCQGMDCKENIIEVESLGGEDSVALFEKFMELHDGMSLEMKEIARDLSDKCMGLPLAIVRIATSMKGKTQASKWSHMSDCLENLGYGQYEMDKWVLPVLRSSYDFLNKKLQRFFLCCALSIYGLSDDEDVNHLIRRFSYESMDETKKWTVQYNEGYNMLDKLKNHSMLKRCGDFGWTIHAFVRFMAIGIAENTGKIMANAYKELTGIPSDDQWKEDLQEVFLMGNWIKTIPNGTRPRCSQLSTLLFDRNENLNYIPNDFFDNMPVLKTLDLSYTSIESLPESVSSLKCLIALLLSGCRELSFIPSLRELKRLIALDVSYTAIKEAPRGLEALVNLRCLNLLDTYFDTPAPTGLDWVTGPGGIQNLEKLEVIVARFGDISVFNSSMSFLDKKCALWSFDLTLEGSGYDPNYADDERTGERSVKRITFDGVDLGNGVAILLGDIKELIIKCCNQETCVRDLCKFLSYDKNSNNPHQIERLDIKRCEVGDCEEMKEIVGEDHSEKEPTASGKRSHPPLITLPNLTSMKLWFMPQLNYLYRGVLLCPSLQTFSAWGVCEQLDPPRIKISSDGCLLPMKKTGFGYH 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1976 690 MobiDBLite consensus disorder prediction 603 617 - -
Mibi07g1976 690 Pfam NB-ARC domain 1 213 IPR002182 GO:0043531
Mibi07g1976 690 Pfam Leucine rich repeat 349 407 IPR001611 GO:0005515
Mibi07g1976 690 MobiDBLite consensus disorder prediction 603 622 - -
Mibi07g1976 690 Gene3D - 126 216 IPR042197 -
Mibi07g1976 690 Gene3D - 1 125 IPR027417 -
Mibi07g1976 690 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1 655 - -
Mibi07g1976 690 SUPERFAMILY L domain-like 312 659 - -
Mibi07g1976 690 CDD AAA 3 109 - -
Mibi07g1976 690 Gene3D Ribonuclease Inhibitor 300 666 IPR032675 -
Mibi07g1976 690 PRINTS Disease resistance protein signature 160 174 - -
Mibi07g1976 690 PRINTS Disease resistance protein signature 68 82 - -
Mibi07g1976 690 PRINTS Disease resistance protein signature 370 386 - -
Mibi07g1976 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 226 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1976 Mibi-ChrMibi07 41358579 41360900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1976 342 460 WRKY Transcription Factor Family AT4G12020 34.711 5.91e-06 48.1