Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1966 ATGGGAGGGAATCGTTTGCATGGAAAAATACCCCCCTCAATGGGAAATCTTAGGGGCTTGAGTTTATTAAATTTGGGTCACAATGCAATCTCAGGAGAAATTCCTTTTGAGTTAAGCCAACTAGAGAACCTACAAGAGCTCAGTCTGGCTGCGAATAAGATATCTGGAAGTATTCCAAAATCCCTTGGGCGTCTCCAAAAGCTGAACAGACTTGATTTGTCACGCAATGAGCTTGTGGGTGAGATACCTTCGAGTTTTGAAAATTTTCAGGAGATTGAATCTATGGACTTATCTAACAACAAGCTCAACGGAAGCATACCTAAAGAAGTACTCAGTCTCTCATCTCTAACCACTTATTTAAACGTTTCTAAGAACCTTTTGAGTGGATCTTTGCCTCAAGAAATAAGAAGTTTGATCAAAGTTTCAACCATAGACTTCTCAGACAACCTTTTGGTGGGTGAAATCCCTAGCTCAATCAGCAATTGTCTAAGCCTAGAATATCTATTTTTAGCACGAAATATGATCTCTGGTCTTATTCCAAAAGCTCTAGGAAGCATAAGAGGCTTGGAAATTCTAGACCTTTCCTCCAACCAAATCTCTGGATCTATTCCTGTTGAACTACAAAGTCTAAATGCCCTACAGATTGAAACTCCAATTGTGCATTGTGATTTGAAGCCAAGCAATATTCTGTTGCGTCAAGATATGACTGCAAAGGTGGGAGATTTTGGATTGGCTAGGCTTATGATGGAATGGCCAACTAATCATGTCTCAATAAGCTCCGGTCATGTCCTAAGAGGTTCAATTGGTTTTATACCTCCAGAGTATGGATGGGGAGAAAAACCATCAATAGAAGGAGATGCATACAGTTTTGGAGTTATGTTGCTTCAACTCTTTTCTGGGAGAAGCCCAACAGATGATAGCTTCACAGGTGGCCTAAGCTTAACAAGATGGGTGCAATCAGCATTCCAAGACAAGACTTTGCAAGTCATAGACCCTCAGCTTCTACCACACATATTTCCCAATGGACTTACTGATGGAAGCCCCAGTCTATTACTCCATTGTATGAATGGAATTCTGGGAGTTGGGTTATCCTGCACTGCAGATTCTCCAAATGAACGCCTTAAGATGAAAGATGCTGTCACAAAATTACAAGTTGTCAGAGATAATCTCTCCAAACTCAATCAATACATGGACCCTTAA 1200 0.4058 MGGNRLHGKIPPSMGNLRGLSLLNLGHNAISGEIPFELSQLENLQELSLAANKISGSIPKSLGRLQKLNRLDLSRNELVGEIPSSFENFQEIESMDLSNNKLNGSIPKEVLSLSSLTTYLNVSKNLLSGSLPQEIRSLIKVSTIDFSDNLLVGEIPSSISNCLSLEYLFLARNMISGLIPKALGSIRGLEILDLSSNQISGSIPVELQSLNALQIETPIVHCDLKPSNILLRQDMTAKVGDFGLARLMMEWPTNHVSISSGHVLRGSIGFIPPEYGWGEKPSIEGDAYSFGVMLLQLFSGRSPTDDSFTGGLSLTRWVQSAFQDKTLQVIDPQLLPHIFPNGLTDGSPSLLLHCMNGILGVGLSCTADSPNERLKMKDAVTKLQVVRDNLSKLNQYMDP 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1966 399 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 132 217 - -
Mibi07g1966 399 ProSiteProfiles Leucine-rich repeat profile. 188 211 IPR001611 GO:0005515
Mibi07g1966 399 FunFam Predicted protein 9 108 - -
Mibi07g1966 399 SUPERFAMILY L domain-like 2 214 - -
Mibi07g1966 399 Pfam Leucine rich repeat 141 199 IPR001611 GO:0005515
Mibi07g1966 399 Pfam Leucine rich repeat 43 102 IPR001611 GO:0005515
Mibi07g1966 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Mibi07g1966 399 Gene3D Ribonuclease Inhibitor 90 211 IPR032675 -
Mibi07g1966 399 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 197 395 - -
Mibi07g1966 399 SUPERFAMILY Protein kinase-like (PK-like) 216 384 IPR011009 -
Mibi07g1966 399 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 213 - -
Mibi07g1966 399 ProSiteProfiles Protein kinase domain profile. 71 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1966 399 Gene3D Ribonuclease Inhibitor 4 85 IPR032675 -
Mibi07g1966 399 Pfam Protein kinase domain 208 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1966 399 PRINTS Leucine-rich repeat signature 186 199 - -
Mibi07g1966 399 PRINTS Leucine-rich repeat signature 92 105 - -
Mibi07g1966 399 SMART serkin_6 135 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1966 399 Gene3D Transferase(Phosphotransferase) domain 1 212 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1966 Mibi-ChrMibi07 41094585 41097015 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1966 213 392 Receptor kinase-like Gene Family AT3G47090 43.407 8.72e-42 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mibi07g1966 Pkinase 5.4e-15 CL0016