Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1964 ATGACCACAGATACTGAAGCTTTGATCTCGTTGAAGTCTCAGTTGAGTAATGTTGATCCTTCTCACCCTTTATCTTCTTGGAACCAGAGTTCATCATCACCATGCAACTGATTCACTGGCAGAATTCCCTGGTCTTTACATAATCTCACCAACATTCAGGTTATTCGCATGGCTTCCAACCTTTTGGAAGGAACAGTGCCACCAGGTCTAGGAAATCTCCCCTTCCTTCGTATGTACAATATAGGGTATAATAGAATAGTAAGCTCCGGAGATAGAGGCCTAGACTTCATTACTTCATTGGCAAACAGCACCCACCTGAACTTTCTTGCAATTGATGGCAATAAGTTGGAAGGTGTAATTCCAGAGAGCATTGGGAATCTCTCCAAGGTTCTCTCAAAATTATACATGGGAGGGAATCGTTTCCATGGAAACATACCCCCCTCAATTGGAAATCTTAGAGGCTTGAGTTTATTAAACTTGAGTTACAATGCAATCTCAGGAGGAATTCCTTCTGAGTTAAGCCAACTGGAGAACCTACAAGAGCTCAGTCTGGCCGGCAATGAGATATCTGGAAGTCTTATTCCAAAAGCTCTTGGAAGCATCAGAGGCTTGGAAATTCTAGACCTTTCCACCAACCAACTCTCTGGATCCATTCCTGTTGAACTTCAAAATCTAGATGCCCTTCAGTTATTGAACCTTTCATATAATAACTTAGAAGGAGCCATCCCCAGGAATGGAGTTTTCACAAATCTCTCCTCTTTCCATTTTGAAGGCAATAAGAAACTGTATATGACTGCAAAGGTGGGTGATTTTGGATTGGCTAGGGTGTTGATTGAAAGACCAACTAGTCAATTCTCAATAAGCTCCACTCATGTTCTCAAAGGTTCAATCGGTTACATACCTCCAGAGTATGGATGGGGAGAAAAGCCATCAGTGGCAGGAGATACATACAGTTTTGGGATTGTGTTACTAGAGCTCTTTTCTGGGAGGAGCCCAGTAGATGATAGCTTCACAGGGGGATCAAGCTTAACAAGATGGGTTCAATCAGCATTCCCAGACAATACTGTGCAAATCATAGACACTCAGCTTCTGTCACACATTTTTCACAATGACCTTTCTGATGATAAAGGTCCAAATTTACAACTTGATTATGTGAATGGAATCCTAAGGGTTGGGCTATCTTGCACTGCAGAGTCTCCAGATGAGCGCCTTAAAATGAAAGATGCTGTTGCAAAATTAAAAGTTGTCAGAGACAATCTTTCCAGACTCGATCAAAACAAGGGCCCTTCTGAGCGTTAGATGGAGATTATTGCGATGAGCACCTTATTAGGTGATCATGGCATGTTGGTAAAGGTCATGGTGTTCTTGGTTGTACAAGCTTTAGTGTATCTCATCATTTCCAGCTCTTCAGACATCTTCTCCCGCACCAAGTGCAAGAGATCTGGTAGCTTTAAGCTTGCCCGGAGTGCGAGTATTCGCCGGATTCTCACTGTGCTTGCTGATTTACCATGGGAAGACGAAGGAGAACCCTCAACTCCTATGTCTGTGAAGTGCAGCATCATTACTTAG 1569 0.4277 MTTDTEALISLKSQLSNVDPSHPLSSWNQSSSSPCNXFTGRIPWSLHNLTNIQVIRMASNLLEGTVPPGLGNLPFLRMYNIGYNRIVSSGDRGLDFITSLANSTHLNFLAIDGNKLEGVIPESIGNLSKVLSKLYMGGNRFHGNIPPSIGNLRGLSLLNLSYNAISGGIPSELSQLENLQELSLAGNEISGSLIPKALGSIRGLEILDLSTNQLSGSIPVELQNLDALQLLNLSYNNLEGAIPRNGVFTNLSSFHFEGNKKLYMTAKVGDFGLARVLIERPTSQFSISSTHVLKGSIGYIPPEYGWGEKPSVAGDTYSFGIVLLELFSGRSPVDDSFTGGSSLTRWVQSAFPDNTVQIIDTQLLSHIFHNDLSDDKGPNLQLDYVNGILRVGLSCTAESPDERLKMKDAVAKLKVVRDNLSRLDQNKGPSERXMEIIAMSTLLGDHGMLVKVMVFLVVQALVYLIISSSSDIFSRTKCKRSGSFKLARSASIRRILTVLADLPWEDEGEPSTPMSVKCSIIT 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1964 522 SUPERFAMILY L domain-like 33 262 - -
Mibi07g1964 522 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 147 268 - -
Mibi07g1964 522 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 264 414 - -
Mibi07g1964 522 Pfam Leucine rich repeat N-terminal domain 3 36 IPR013210 -
Mibi07g1964 522 Pfam Leucine rich repeat 131 189 IPR001611 GO:0005515
Mibi07g1964 522 Gene3D Ribonuclease Inhibitor 1 264 IPR032675 -
Mibi07g1964 522 Coils Coil 406 426 - -
Mibi07g1964 522 SUPERFAMILY Protein kinase-like (PK-like) 264 419 IPR011009 -
Mibi07g1964 522 Gene3D Transferase(Phosphotransferase) domain 1 265 437 - -
Mibi07g1964 522 PRINTS Leucine-rich repeat signature 225 238 - -
Mibi07g1964 522 PRINTS Leucine-rich repeat signature 204 217 - -
Mibi07g1964 522 Pfam Protein tyrosine and serine/threonine kinase 265 351 IPR001245 GO:0004672|GO:0006468
Mibi07g1964 522 ProSiteProfiles Protein kinase domain profile. 81 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1964 Mibi-ChrMibi07 41059756 41067296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1964 264 422 Receptor kinase-like Gene Family AT3G47570 37.349 3.38e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mibi07g1964 PK_Tyr_Ser-Thr 9.3e-08 CL0016