Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1954 ATGGAAAATCACCACCATAACTCCGGCGACGAAAACCACCACCACCACCACCACCGTCACCGCCACCATCGCCGCCGTCAAACCTGGGGAACATGGGAGGACCTTCTCTTAGCATCGGCCGTGAAACGCCATGGCTCCGACGACTGGAACGCCATCTCCATGGAGATCCAGAATCGAACCAACCTCCCTCACCTTCTCACCACCGCTAATTCCTGCCACCACAAATTCATCGATCTCCAACGCCGATTCAACGACGTCGTTCTCAAACCTCCGCCGTCCGCCGCCGCCTCTCACGACGGCGACACCGTCGATCACGTGCTCGACGAATTGCGAAACCTCCGTGTCGCCGAACTCCGGCGAGAAGTTCAACGTCACGACGTCTCCATTCTGTCGTTGCAGAGTAAGGTGAAGAGATTGGAGGAAGAGAGAGAGAGAAACTTGAAGAAGGAGAATAATGAAGGTGAGAAACCAGATCTGGAAAACTCCGGTAAACCGGAAAGCGACAAAAAAACCGGACAACCTGAACCGGAAAAGCGGTTCAGTGAAGGTGTTGGGAATGATAACAGCAAAGATAACAACAACAACAACCGTAACAGCAGTAGTAATAGGGATGATTCCGACCGGGAGAATCAATCGGTTAACGAGTCGAATTCGACCGGTTCAAGATCCGCCGGGGAGAAAACCGATAAAAAGGATGAACCGGATCCGGTTCAGACCGGGGCGAAAAAACCGATGGAGGGATCGTCCGAGTTGAGAGACTCGGGGGTAAACTCGGAAGGTGGAGAGGTACAGAGTTCGGCGAGCTTGACGAGGAAGAGGAAGACGAGGAGGAGGAAGGAGGTGGCTGCCGCCGCAGGCGGCGGAGGGGGGTTGCCGGAGAAGGATGAGGTGGCGGTGAAATCTGGGCCGTTGATTGGTGTGTTGGAGATGATCAGAGGGCATGAGAATAGTTCCTTGTTCGAGCGCCGTCTTGAAAGCCAGGAGGAATGGGAAAAATACAAAAGCATGGTACGTGAGCACGTAGACTTACAAACCATACAAACTCGCCTTAAAAATGGCCACTACTCCTCCTCCTCCGGCGCCACCGTCTTCTTCCGTGACCTCCTCCTCCTCTTCACCAACGCCGCCGCCTTCTTCCCCGCCGACTCCGTCCACTCACGCGCCGCCGCCCACCTCTCCAACCTCGTCATCTCCGACCACATCAAAAACTTCCCCACCACCACCCCTCCTCCTCCTCCTCCGCCTCCGCCTCCACCGTCCTCCTCCGTCAAGCCGGAGAATTCTTCGAGTAACTTGCTTCACAAGCACAAAGCTTCTGCTCCCATATTGGTTTGCCGGAAACGGAGCTCCATCACCGGAAAACCTTCCTCTGCTTCTACCTTTAAGGTAAGCAGTAGTAGTGAGAAGAAACCGCCTCCGCCGCCACCCCAGAAGAGACCACCGCCGGTTTCCGATGATTCCGACGAAGAACCACCTAGTCGGAAGGAAAAGCCAGTGACCGGAGCGAGAAGCGTGAGAAAAAGCAACAAAAACCTCCCCGGAGCCATCCAGAACAAGAAGGTTCAATCCAATAGTAGTAAAGCAAGCCCTTTAAAATCAGATCAAAAGAGCAAAGCTGAAGAAGAAAAAGCAGCAGCACTTGTGCCGGAGAAAAAGAGGAGCGCCGCCGCAGATTTCTTGAAGAGGATAAAGAAAATCAGCTCCGGCGGCGGCGGAGGCGGCGGAGGGAGAGATCAGAAGAAGGTGGTGGGTGGTGGTGGTGGAGGAGGAAAGGGTGAGCAGAAAGGTGGGAGGGAGAGAAAAGTAGTGAAGCATAATGATCAGAGCAATACAGAGAATAATAATATTAATAATAGTAGTAGCAGTCAGTCAAAGAAAAGCGTAGGGAGGCCACCAAAGAAAGTAGGAGAGGGTAATAACAATAGTAATAGTAATAATAATATTAATGTTAATAGTAATAGTAATGTTTCAGGTTCTGGTAAACGTGGAAGGGATCAAAGTGGTGGTGGTGGTAATAGTGGGAAGGATCATAAGAGGCCCAAGAAACGAACTAGGAGGTAG 2061 0.523 MENHHHNSGDENHHHHHHRHRHHRRRQTWGTWEDLLLASAVKRHGSDDWNAISMEIQNRTNLPHLLTTANSCHHKFIDLQRRFNDVVLKPPPSAAASHDGDTVDHVLDELRNLRVAELRREVQRHDVSILSLQSKVKRLEEERERNLKKENNEGEKPDLENSGKPESDKKTGQPEPEKRFSEGVGNDNSKDNNNNNRNSSSNRDDSDRENQSVNESNSTGSRSAGEKTDKKDEPDPVQTGAKKPMEGSSELRDSGVNSEGGEVQSSASLTRKRKTRRRKEVAAAAGGGGGLPEKDEVAVKSGPLIGVLEMIRGHENSSLFERRLESQEEWEKYKSMVREHVDLQTIQTRLKNGHYSSSSGATVFFRDLLLLFTNAAAFFPADSVHSRAAAHLSNLVISDHIKNFPTTTPPPPPPPPPPPSSSVKPENSSSNLLHKHKASAPILVCRKRSSITGKPSSASTFKVSSSSEKKPPPPPPQKRPPPVSDDSDEEPPSRKEKPVTGARSVRKSNKNLPGAIQNKKVQSNSSKASPLKSDQKSKAEEEKAAALVPEKKRSAAADFLKRIKKISSGGGGGGGGRDQKKVVGGGGGGGKGEQKGGRERKVVKHNDQSNTENNNINNSSSSQSKKSVGRPPKKVGEGNNNSNSNNNINVNSNSNVSGSGKRGRDQSGGGGNSGKDHKRPKKRTRR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1954 686 CDD SANT 28 76 IPR001005 -
Mibi07g1954 686 ProSiteProfiles Bromodomain profile. 312 386 IPR001487 GO:0005515
Mibi07g1954 686 SUPERFAMILY Homeodomain-like 21 61 IPR009057 -
Mibi07g1954 686 Coils Coil 122 152 - -
Mibi07g1954 686 MobiDBLite consensus disorder prediction 608 628 - -
Mibi07g1954 686 MobiDBLite consensus disorder prediction 1 25 - -
Mibi07g1954 686 Pfam Bromodomain 308 390 IPR001487 GO:0005515
Mibi07g1954 686 MobiDBLite consensus disorder prediction 482 503 - -
Mibi07g1954 686 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 257 686 - -
Mibi07g1954 686 Gene3D - 17 85 - -
Mibi07g1954 686 MobiDBLite consensus disorder prediction 140 295 - -
Mibi07g1954 686 MobiDBLite consensus disorder prediction 593 607 - -
Mibi07g1954 686 MobiDBLite consensus disorder prediction 224 239 - -
Mibi07g1954 686 SMART bromo_6 104 405 IPR001487 GO:0005515
Mibi07g1954 686 MobiDBLite consensus disorder prediction 533 560 - -
Mibi07g1954 686 MobiDBLite consensus disorder prediction 450 467 - -
Mibi07g1954 686 CDD Bromodomain 310 396 - -
Mibi07g1954 686 MobiDBLite consensus disorder prediction 10 25 - -
Mibi07g1954 686 MobiDBLite consensus disorder prediction 405 423 - -
Mibi07g1954 686 MobiDBLite consensus disorder prediction 140 185 - -
Mibi07g1954 686 SUPERFAMILY Bromodomain 304 416 IPR036427 GO:0005515
Mibi07g1954 686 MobiDBLite consensus disorder prediction 402 686 - -
Mibi07g1954 686 Gene3D - 295 402 IPR036427 GO:0005515
Mibi07g1954 686 SMART sant 25 82 IPR001005 -
Mibi07g1954 686 MobiDBLite consensus disorder prediction 504 532 - -
Mibi07g1954 686 MobiDBLite consensus disorder prediction 636 662 - -
Mibi07g1954 686 Pfam Myb-like DNA-binding domain 26 78 IPR001005 -
Mibi07g1954 686 MobiDBLite consensus disorder prediction 251 268 - -
Mibi07g1954 686 ProSiteProfiles Myb-like domain profile. 21 80 IPR001005 -
Mibi07g1954 686 MobiDBLite consensus disorder prediction 186 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1954 Mibi-ChrMibi07 40889625 40895115 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi07g1954 Bromodomain 8.7e-12 No_clan