Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1950 ATGTGGAGATTTAAGCCATTCACTCAAAAAGAGCCAGCTGGGCTCGAAGGTCGTTCTATTGATGTTGGTAATCTTAAAGTAAATGTCCTGAAGGCCATCGCTGAGGGTGGCTTCTCTTGTGTCTACCTGGCTCGTGATGCTGTACACATGTCAAAGCAATATGCTTTGAAGCACATGATTTGTAATGATGAAGAATCACTTGAATTAGTGAAGAAGGAGATCTCAGTCATGAAGTCATTGAAAGGGCATCCCAACGTTGTCACACTATATGCTCATGCGGTCTTTGATATGGGTAGGACAAAAGAGGCATTCCTTGTGATGGAACTTTGTGATAAGTCTCTGGTTAATGTGCTGGAGAGCCGTGGAGCTGGTTATTTTGATGAGAAGCAGGTTCTTCTGATCTTTAGGGATGCGTGTAATGCAGTTTTTGCTATGCACTGCCAATCCCCACCCATTGCTCACCGGGACTTGAAAGCTGAGAATCTTTTATTAGGCCCAGATGGTCTATGGAAACTATGTGATTTTGGGAGTACTTCCACCAATCACAAGCGTTTTGAGAAACCAGAAGAAATGGGGGTTGAGGAAGACAATATCAGGAAGCACACGACACCTGCCTACAGGGCCCCTGAGATGTGGGATCTGTTTCTGAGAGAGGTTATCAATGAGAAAGTGGACATATGGGCATTGGGGTGTCTCCTTTTCCGTATTTGCTACTTCAAAAGTGCATTTGATGGTGAATCAAAGTTGCAAGTCTTGAATGGAAACTATCGCATTCCTGACATGCCTAAATATAGTTCATCCGTCACTGACCTAATCAGAGATATGCTCCAGGCCAGACCAGACGACAGACCAGATATCACGCAGGTCTGGTTTCGTGTCAATGAGCATTTACCTATTGATCAGCAAAAGTCATTACCTGATAGACCACCTGAATTGCCATCTTCCAACAATCACGAAGGTTCTGCAAAGCCTGTAGCTCAGTCATCTCCAGTGCCCCGTCGGAGTCCACCTCCTCCACCTTCATCTGGAGAAATTAAAAATTCATCACAGTCATCCCTTTCTTCTAGGGGTGGGGGAAGTGCAGGGCAGCTTGGCGCATTTTGGTCTACCATGCATGCAAAGGATTCGCCTGCCTCAGAGGTTAAGAGCAAACCAATATTTGATGAAGAACCATCTGACCATCATGTCTCAACAACACATGATAGAATCCGTCCAGACAATAACCAATTGCCCAAGAATGTTGGTGGTAAAAAAGTGGATGTTGGACAACCGCAAAATGTGAAAAACAGTGAGCATGGAAAATCACACAAGCCTGATACTGGATCTTCCAAGGACTTTGAAATAAAATTTTACCAGGACACACATCTTGCTGGTGAGAGGCGAGCTTCTTCAAATAAGGAGAACACAGCTTCCTTTCAAGATAGGGCTTTTGACACATTTGTTGCTGAATTTGATACCAGTAAGCTTAGCTCTGGATTCAGTGATAAAAAATCTGAAAAGGAGGAAGCATTAGAGGCTGAGGTGGAGAAACTCAGAGTGCAGCTGAAGGAAGCTCAGCTGGAGAAAGCTGAAATAACTTCAAAGTACGAAAAGCTTTCTGCCATTTGCCGATCTCAAAGGCAAGAGCTCCAGGATCTGAAGCAAACCCTTGCAGCAAGAACTCCATCGCCAAAGAAAGAGGGTCTGAGTGCCTCTCCTACGGTTCCATCGTCTGTGGCTATGAAGGAGAAGGTTAGTGGGACTATATGGGATCTCCAGCAAAACAAAACTGAAACAAAAAGTCGTAGTTCAGAACCAAAGTCATGGCAAGCTTTTGCAGAGGAACCCCAGCAACTAAAGTCTGCTTCTGCGGACAATAATAGATCCAAATCTGTCCGGACTAGAAAAATTCATCAAAACGAGCAACCAGTTCAACAACATTCAGATTTTGAAACATGGGGTTTTGGAACAGATAGTTTCACTGCTGTATCGACTGCTGGCAGCTCGCAGATCTCTAGACCTCCTAGCTCAGAAGGTGGTAATCCTCAGGCTTTTGGTAATGCCAAGGCATATGAGAGCAAGTCAACTTCCCATCCTGCTGGATGGGCTGGTTTCTAA 2097 0.4464 MWRFKPFTQKEPAGLEGRSIDVGNLKVNVLKAIAEGGFSCVYLARDAVHMSKQYALKHMICNDEESLELVKKEISVMKSLKGHPNVVTLYAHAVFDMGRTKEAFLVMELCDKSLVNVLESRGAGYFDEKQVLLIFRDACNAVFAMHCQSPPIAHRDLKAENLLLGPDGLWKLCDFGSTSTNHKRFEKPEEMGVEEDNIRKHTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDMPKYSSSVTDLIRDMLQARPDDRPDITQVWFRVNEHLPIDQQKSLPDRPPELPSSNNHEGSAKPVAQSSPVPRRSPPPPPSSGEIKNSSQSSLSSRGGGSAGQLGAFWSTMHAKDSPASEVKSKPIFDEEPSDHHVSTTHDRIRPDNNQLPKNVGGKKVDVGQPQNVKNSEHGKSHKPDTGSSKDFEIKFYQDTHLAGERRASSNKENTASFQDRAFDTFVAEFDTSKLSSGFSDKKSEKEEALEAEVEKLRVQLKEAQLEKAEITSKYEKLSAICRSQRQELQDLKQTLAARTPSPKKEGLSASPTVPSSVAMKEKVSGTIWDLQQNKTETKSRSSEPKSWQAFAEEPQQLKSASADNNRSKSVRTRKIHQNEQPVQQHSDFETWGFGTDSFTAVSTAGSSQISRPPSSEGGNPQAFGNAKAYESKSTSHPAGWAGF 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1950 698 ProSiteProfiles Protein kinase domain profile. 27 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1950 698 CDD STKc_GAK_like 26 298 - -
Mibi07g1950 698 Gene3D Transferase(Phosphotransferase) domain 1 11 307 - -
Mibi07g1950 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Mibi07g1950 698 MobiDBLite consensus disorder prediction 546 698 - -
Mibi07g1950 698 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1950 698 MobiDBLite consensus disorder prediction 597 621 - -
Mibi07g1950 698 MobiDBLite consensus disorder prediction 430 447 - -
Mibi07g1950 698 MobiDBLite consensus disorder prediction 636 687 - -
Mibi07g1950 698 Coils Coil 494 549 - -
Mibi07g1950 698 MobiDBLite consensus disorder prediction 344 359 - -
Mibi07g1950 698 SMART serkin_6 27 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1950 698 MobiDBLite consensus disorder prediction 300 447 - -
Mibi07g1950 698 PANTHER SERINE/THREONINE PROTEIN KINASE 1 682 - -
Mibi07g1950 698 MobiDBLite consensus disorder prediction 377 407 - -
Mibi07g1950 698 FunFam probable serine/threonine-protein kinase DDB_G0280111 10 305 - -
Mibi07g1950 698 MobiDBLite consensus disorder prediction 308 324 - -
Mibi07g1950 698 SUPERFAMILY Protein kinase-like (PK-like) 28 342 IPR011009 -
Mibi07g1950 698 MobiDBLite consensus disorder prediction 560 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1950 Mibi-ChrMibi07 40859135 40862358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1950 31 292 CBL-interacting serine-threonine protein kinases AT4G18700 28.777 4.60e-19 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Mibi07g1950 Pkinase 2e-39 CL0016