Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1941 ATGGCTTTATCCTCTTCCCTTTTCTCGCCACCCCATCATCTTCTCTCCAACCACACTTCAAAGTCCATTTCAACTTCTTCAAGATTCTCTAATAATCACCTTCTCAAATCTGTCTATTTACAACCCTTTGTCAAATCGGCACCTTCTCTTATAGTCACAACAAAACCCAGACACTACCAGAGACCCTTTGCTGTTGCAGAAGAAACTGTGGTCACTTCACCACCCGACCCCAAATCTGAGGCCTCTAGGAAGCTCTATATTGGGAACATCCCACGTAATGTCGATAACAATGAGCTTACCCGGATTGTTGAAGAGCATGGTGCTGTTGAGAAAGCTGAGGTCATGTATGACAAATACTCTGGAAGGAGCCGTCGCTTTGCATTTGTTACGATGAAGACGGTTGAGGATGCAAATGCAGTAATTGAGAAGCTAAATGGCACTGAAATCGGAGGGCGTGAAGTCAAAGTAAACATTACAGAAAAACCTCTGACAACAGTTGATCTATCTAGTCTCCAGGCAGAGGACTCTGAATTCATCGACAGTCCCCACAAAGTATATGTAGGAAATCTTGCAAAAACAGTAACAACTGATGTACTTAAAGACTTCTTCTCTTCAAATGGAAATGTTCTTAGTGCCAAGGTTTCGCGTGTTCCTGGGACCTCAAAATCCACTGGTTTTGGTTTTGTCTCATTTTCTTCAGCTGAGGATGTTGAGGCTGCGATCTCATCTTTCAACAATTCTTTGTTAGAAGGGCAACGAATTCGTGTGAACAAGGCATGA 780 0.4295 MALSSSLFSPPHHLLSNHTSKSISTSSRFSNNHLLKSVYLQPFVKSAPSLIVTTKPRHYQRPFAVAEETVVTSPPDPKSEASRKLYIGNIPRNVDNNELTRIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANAVIEKLNGTEIGGREVKVNITEKPLTTVDLSSLQAEDSEFIDSPHKVYVGNLAKTVTTDVLKDFFSSNGNVLSAKVSRVPGTSKSTGFGFVSFSSAEDVEAAISSFNNSLLEGQRIRVNKA 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1941 259 FunFam 30S ribosomal protein 2, chloroplastic 170 259 - -
Mibi07g1941 259 Gene3D - 55 165 IPR012677 -
Mibi07g1941 259 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 183 259 IPR000504 GO:0003723
Mibi07g1941 259 SUPERFAMILY RNA-binding domain, RBD 177 259 IPR035979 GO:0003676
Mibi07g1941 259 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 85 155 IPR000504 GO:0003723
Mibi07g1941 259 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 185 255 IPR000504 GO:0003723
Mibi07g1941 259 Gene3D - 167 259 IPR012677 -
Mibi07g1941 259 CDD RRM_HP0827_like 84 161 - -
Mibi07g1941 259 PANTHER OS02G0815200 PROTEIN 64 258 - -
Mibi07g1941 259 SMART rrm1_1 184 257 IPR000504 GO:0003723
Mibi07g1941 259 SMART rrm1_1 84 157 IPR000504 GO:0003723
Mibi07g1941 259 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 83 161 IPR000504 GO:0003723
Mibi07g1941 259 SUPERFAMILY RNA-binding domain, RBD 74 161 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1941 Mibi-ChrMibi07 40741636 40745198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1941 70 259 Eukaryotic Initiation Factors Gene Family AT1G22760 29.897 3.83e-12 63.9