Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1940 ATGGCGCCGAAAACTGCCAGGATCACCAGAAATCCTGAACTGATTAGGGGCATCGGAAAGTATTCGAGATCGAAGATGTACCACAAGAGAGGTTTGTGGGCCGTCAAGGCCAAAAACGGCGGCGTTTTCCCTCGTCACGATGCCAAACCTAAGCCCCAACCTCCCGCAGTGAAGCCTCCCAAATTCTACCCTGCCGATGATGTCAAGAAGCCCCTCCTCAATAAGCACAAACCCAAACCCACTAAACTTAGGGCCAGCATTACTCCTGGGACTGTGTTGATACTTCTTGCTGGAAGGTTCATGGGAAAGAGAGTAGTGTTTCTGAAGCAGCTTCCTTCTGGATTGCTTCTTGTTACTGGTCCATTCAAGATAAACGGAGTTCCTTTGAGGCGCGTAAGCCAGTCTTATGTGATCGGAACATCCACTAAGGTAGATATTTCTGGAGTTAACTTGGAAAAATATGACGACAAGTACTTTGCCAAGAAAGCTGAGAAGAAGAAGAAAAAGGGAGAGGGAGAGTTCTTTGAGGCAGAGAAGGAGGAGAAAAATGCGATCCCACAAGAGAAGAAAGATGATCAGAAAGTGGTGGACGCAGCATTGATAAAAGCCATAGAGAGCCTTCCAGACTTGAAGGCTTATTTGAGTGCAAGATTTTCGCTCAAGGCAGGCATGAAGCCTCATGAGCTGGTCTTTTAA 696 0.4698 MAPKTARITRNPELIRGIGKYSRSKMYHKRGLWAVKAKNGGVFPRHDAKPKPQPPAVKPPKFYPADDVKKPLLNKHKPKPTKLRASITPGTVLILLAGRFMGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVSQSYVIGTSTKVDISGVNLEKYDDKYFAKKAEKKKKKGEGEFFEAEKEEKNAIPQEKKDDQKVVDAALIKAIESLPDLKAYLSARFSLKAGMKPHELVF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1940 231 Pfam Ribosomal protein L6, N-terminal domain 5 56 IPR005568 GO:0003735|GO:0005840|GO:0006412
Mibi07g1940 231 SUPERFAMILY Translation proteins SH3-like domain 85 174 IPR008991 -
Mibi07g1940 231 FunFam 60S ribosomal protein L6 85 169 - -
Mibi07g1940 231 CDD KOW_RPL6 79 231 IPR041997 -
Mibi07g1940 231 Pfam Ribosomal protein L6e 124 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
Mibi07g1940 231 PANTHER 60S RIBOSOMAL PROTEIN L6 1 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
Mibi07g1940 231 Coils Coil 160 180 - -
Mibi07g1940 231 Gene3D - 85 170 IPR014722 -
Mibi07g1940 231 MobiDBLite consensus disorder prediction 170 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1940 Mibi-ChrMibi07 40728310 40730214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1940 4 231 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 81.579 2.58e-120 340