Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1934 ATGGATTCAATACACCACTTGAATCCTGGATTAATGAGGTACAGTTCTGCTCCAAGCTCATTCCTGGCAAGCCTTGTTCAGAATACGAATGGCTGTGTGAATGAGGAAGCTTCAAGAAGCTATGGTCATCATCACAATCCATCTTCAAGTTCAGAAATGGAGACCATGTTGGCCAAGTTGGTTTCTTCATCTTCATCATCATCAAACAATGGATGGATCAAGCAAGAAGAAGCAGGGGCCTCTGTTTCAGAGGGACACAATAATGGGTATAATTCTAATTATGGTTCTCAGATGATTTACCAATCTCAGCAGGCTCAGCAAGCTGTTCAAGGTTTGCCAAGTGGTTCTTTAGGTTCCTCTTCTGGCAATGATTTTGATGGCTCATACAATTCCTCTGAGTTCAAAATAAGGCCTAATAATCTCTTTAGGCAGAAAAGTTCCCCTGCTGGACTGTTCAACAATTTCTCAGTTGAAAATGGTTTTGCAACATGGAGAAATCATGTCTCAAATGGCCAAGCTTCTACGTCAGCAAGTGGGTTAAATGAGAACACTCTAGCCTTCTCATCTATGCCATCTTCGTGTTCAAGACAATTGCCTGATATAGCAGAAGATGGGAATGAAACCCTAGAAGAAGAAACTTGTGGTGACAGGAGAGGAAATCTGAGAAATGACAACAATGGCAGCAGCAACAACACTGAATGTTACATTCCCAACTTCACAAATGACTTCTGGGATGGTCCTTCCTTCAATGACACCAAAACAGCTAGTGACAATGATGAACTCATGTTCACTACTACTTCAAATGGTTTTGAAACTCAGAATGTTGAATTTGGATATGAGAACGTTGGTTTGACTCATCATTTGAGTCTTCCCAGTTCTTCTACAAAGATAAAGATGGGTGCAATTGAGAAGTTTCTTCAAGTTCAAGGATCTGTTCCTTGTAAGATTCGAGCGAAAAGAGGTTTCGCCACTCACCCACGGAGCATTGCAGAGAGGGTAAGAAGAACAAGAATCAGTGAAAGAATAAAGAAATTGCAAGATCTCTTCCCAAAATCTGACAAGCAAACAAGCACAGCAGATATGTTGGATTTAGCAGTTGATTATATTAAAGACTTGCAGAAACAAGTTAAGACGCTCACAGATACTAAGGCAAAGTGCAAGTGTTCAAGTAACCTGATGCATAACTCAGTCCCTTGTAACTAG 1203 0.4065 MDSIHHLNPGLMRYSSAPSSFLASLVQNTNGCVNEEASRSYGHHHNPSSSSEMETMLAKLVSSSSSSSNNGWIKQEEAGASVSEGHNNGYNSNYGSQMIYQSQQAQQAVQGLPSGSLGSSSGNDFDGSYNSSEFKIRPNNLFRQKSSPAGLFNNFSVENGFATWRNHVSNGQASTSASGLNENTLAFSSMPSSCSRQLPDIAEDGNETLEEETCGDRRGNLRNDNNGSSNNTECYIPNFTNDFWDGPSFNDTKTASDNDELMFTTTSNGFETQNVEFGYENVGLTHHLSLPSSSTKIKMGAIEKFLQVQGSVPCKIRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSDKQTSTADMLDLAVDYIKDLQKQVKTLTDTKAKCKCSSNLMHNSVPCN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1934 400 MobiDBLite consensus disorder prediction 202 231 - -
Mibi07g1934 400 Pfam Helix-loop-helix DNA-binding domain 328 373 IPR011598 GO:0046983
Mibi07g1934 400 MobiDBLite consensus disorder prediction 102 130 - -
Mibi07g1934 400 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 17 388 - -
Mibi07g1934 400 SMART finulus 328 378 IPR011598 GO:0046983
Mibi07g1934 400 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 322 372 IPR011598 GO:0046983
Mibi07g1934 400 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 325 388 IPR036638 GO:0046983
Mibi07g1934 400 Gene3D - 324 393 IPR036638 GO:0046983
Mibi07g1934 400 FunFam Transcription factor bHLH130 family 323 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1934 Mibi-ChrMibi07 40700441 40702374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1934 1 395 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 36.429 1.44e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi07g1934 HLH 1.7e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g1934 07 40700441 40702374 Mibi07g1934 07 40700441 40702374 ECH