Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1927 ATGAGGGAAAAAACCCACTTAAAGTTTGAGCCTTTGCTCATTTTCCTTTCTGGGTTATTCTCATTCTTCATCTTCGTTCATTCCCAATCAAACCCTAGCTCAGATGCTCCTGCCATGGAAGCTCTAAGGAAGAGCCTCAACGTCCCTTCTTCTATCAAATGGTCAGATTCAGACCCCTGCAAGTGGGACCATGTTGGCTGTGATGAAGCTCGTGTCACTCGGATCCAAATCGGACGTTTAGGTCTTCAAGGTACGCTTCCTCCAAATCTTGGAGATCTCACTCAGTTACAGCGCTTGGAGCTTCAGTATAATAACATTTCAGGCCCTCTTCCTAGTTTAAAGGGCTTGAGTTCTTTGCAAGTTCTTATTCTTAGTAATAACCAGTTTAGTTCTATTCCTAGCGATTTTTTCTCTGGTTTGTCTCAACTTCAGTCCGTGGAGATTGATAACAACCCATTTGAGGAATGGGAGATACCTGTTAGTCTGAAAGATTCTTCTTCCCTTCAGAACTTCTCGGCCAACTCGGCTAATATCACTGGAAGAATACCTGATTTTGTTAATGCTGATGTGTTTCCTGGTTTGATCCTTTTGCATTTGTCCTTTAATAACCTTGAGGGTGGGTTTCCGGAGAGATTTTCTAGTTTGCTGGTTGATACTTTGTGGGTCAATGGGCAGACAGGTAGAAAATTTAATGGAAGTTTAGATTTTATGCAGAATATGACTTCCTTGAGGGAGGTTTGGTTGCATTCAAATGCATTATCTGGCCCATTACCAGATTTTTCAGGCTTGAAGAATTTGGAGACCTTGAGTTTAAGGGATAATTCGCTTACCGGTCCTGTTCCTCAGTCATTGATGAGTCTTGAGTCATTGAAAGTTGTGAATTTGACTAATAACTTACTTCAAGGGCCTGTGCCAGTGTTCAATCGTGGGGTTGAAGTGGATATGACTAAGGATTCGAATGACTTTTGCTTGCCAAGTCCTGGGGATTGTGATTCTCGGGTGAATACTTTGCTTTCCATTGTTAAACTTATGGGGTATCCTCAGAGGTTTGCTAATGAATGGAAGGGTAATGATCCATGTGCTAATTGGCTTGGGATTACCTGTAGCAATGGGAACATTACTGTTGTTAATTTTCAGAGGATGGGCCTATCTGGTACCATATCCCCAGAGTTTGCCTCGCTCAAATCACTGCAAAGAATTATGCTTGCTGATAACGATCTCACCGGCACGATTCCAAGGGAGCTCACTGCACTTCCTATGCTTACTGAACTGAATCTTGCAAATAATCAGTTTTATGGAAAAGTCCCATCTTTTAGGAGTAATGTATTAGTTAACACTAATGGTAACAAGGACATAGGCAAGGATAGAAGCAGTTCAACCCCTCCAGGTTCCTTATCTCCGAACCCTGCAGGTCAAGGTACAACCGGAGATAATGGTGGAATTTCCACTAATGGTGGCAAAAAACCTTCTCATGTTGCAGTGATTGTAATTGCTGTAGTTGGGGGTGTGTTTTTGGTTTCAATTATCGTTGTCATAGTTTTCTGCTTGTATAGAATGAGGCAAAAGAAGTTAAGCAGGGTACAGAGCCCAAATGCTCTGGTAGTTCACCCTCGTCATTCTGGATCAGACAATGAAAGTTTGAAAATAACAGTTGCTGGCTCGAGTGTCAGTGTTGGTGCGGTTAGTGAAACTCAAACTGTACCTGGCAGTGAGGCAGGAGGAGACATCCAAATGGTTGAAGCTGGAAACATGTTCATTTCCATACAAGTCCTACGGAACGTAACTGACAATTTCAGTGAAAAGAATATATTGGGACAAGGCGGTTTTGGAACAGTATACAAAGGTGAACTTCATGACGGTACCAAAATTGCGGTGAAAAGAATGGAGTCTGGAGCAATAACCGGAAAGGGCGCGTCAGAATTTAAGTCTGAAATTGCTGTCTTGACAAAAGTTCGCCACCGGCATCTTGTTGCACTTCTCGGCTACTGCCTGGATGGGAATGAAAAGCTTTTGGTGTACGAGTACATGCCTCAGGGTACACTAAGTAGGCATCTGTTTAACTGGCCAGAAGAAGGAATAAAACCCTTGGACTGGAATAGAAGATTGACCATTGCCTTAGATGTGGCTAGGGGTGTTGAGTATCTTCATGGCTTAGCCCACCAAAGCTTTATACATAGAGACTTAAAGCCCTCAAACATTCTTCTTGGAGATGATATGAGAGCAAAGGTTGCAGATTTTGGTCTTGTCCGTCTTGCTCCAGAAGGAAAAGCCTCAATAGAGACACGGATTGCTGGAACATTTGGATACTTGGCACCAGAATACGCAGTTACTGGACGTGTGACTACAAAAGTAGATGTGTACAGTTTTGGGGTGATACTGATGGAAATCATAACTGGAAGGAAAGCACTTGACGAAACCCAACCTGAGGACAGTATGCATCTAGTGACTTGGTTCCGCAGAATGTACATAAACGAAGAATCGTTTAGCAAGGCTATTGATCCCACGATCGATCGCAACGAGGAAACTCTTGCCAGCATTCGCACGGTGGCAGAGCTAGCAGGCCACTGCTGCGCACGAGAGCCATATCAAAGGCCAGACATGGGTCATGCCGTGAATGTTCTTTCTTCCCTGGCCGAACTCTGGAAGCCATCTGATCAAAGTTCTGAAGATATATATGGCATTGATCTCGACATGTCTTTGCCTCAAGCGCTGAAGAAATGGCAGGCTTATGAAGGTGGAGGAGGAGGAGGCTCAGTGGATTCTTCTTCTTCTTCACTCCTTCCAAGCTTGGACAACACGCAAACAAGCATACCGACACGGCCGTATGGTTTTGCCGAGTCTTTCACGTCAGCAGATGGGAGGTGA 2865 0.4391 MREKTHLKFEPLLIFLSGLFSFFIFVHSQSNPSSDAPAMEALRKSLNVPSSIKWSDSDPCKWDHVGCDEARVTRIQIGRLGLQGTLPPNLGDLTQLQRLELQYNNISGPLPSLKGLSSLQVLILSNNQFSSIPSDFFSGLSQLQSVEIDNNPFEEWEIPVSLKDSSSLQNFSANSANITGRIPDFVNADVFPGLILLHLSFNNLEGGFPERFSSLLVDTLWVNGQTGRKFNGSLDFMQNMTSLREVWLHSNALSGPLPDFSGLKNLETLSLRDNSLTGPVPQSLMSLESLKVVNLTNNLLQGPVPVFNRGVEVDMTKDSNDFCLPSPGDCDSRVNTLLSIVKLMGYPQRFANEWKGNDPCANWLGITCSNGNITVVNFQRMGLSGTISPEFASLKSLQRIMLADNDLTGTIPRELTALPMLTELNLANNQFYGKVPSFRSNVLVNTNGNKDIGKDRSSSTPPGSLSPNPAGQGTTGDNGGISTNGGKKPSHVAVIVIAVVGGVFLVSIIVVIVFCLYRMRQKKLSRVQSPNALVVHPRHSGSDNESLKITVAGSSVSVGAVSETQTVPGSEAGGDIQMVEAGNMFISIQVLRNVTDNFSEKNILGQGGFGTVYKGELHDGTKIAVKRMESGAITGKGASEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLFNWPEEGIKPLDWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMEIITGRKALDETQPEDSMHLVTWFRRMYINEESFSKAIDPTIDRNEETLASIRTVAELAGHCCAREPYQRPDMGHAVNVLSSLAELWKPSDQSSEDIYGIDLDMSLPQALKKWQAYEGGGGGGSVDSSSSSLLPSLDNTQTSIPTRPYGFAESFTSADGR 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1927 954 Pfam Leucine rich repeat N-terminal domain 334 369 IPR013210 -
Mibi07g1927 954 Pfam Leucine rich repeat N-terminal domain 33 68 IPR013210 -
Mibi07g1927 954 SUPERFAMILY Protein kinase-like (PK-like) 578 882 IPR011009 -
Mibi07g1927 954 Gene3D Phosphorylase Kinase; domain 1 560 675 - -
Mibi07g1927 954 Pfam Leucine rich repeat 95 152 IPR001611 GO:0005515
Mibi07g1927 954 Gene3D Transferase(Phosphotransferase) domain 1 676 895 - -
Mibi07g1927 954 MobiDBLite consensus disorder prediction 917 943 - -
Mibi07g1927 954 FunFam Leucine-rich repeat receptor-like kinase 332 455 - -
Mibi07g1927 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 723 735 IPR008271 GO:0004672|GO:0006468
Mibi07g1927 954 MobiDBLite consensus disorder prediction 446 484 - -
Mibi07g1927 954 Gene3D Ribonuclease Inhibitor 33 330 IPR032675 -
Mibi07g1927 954 SMART serkin_6 598 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1927 954 ProSiteProfiles Leucine-rich repeat profile. 118 139 IPR001611 GO:0005515
Mibi07g1927 954 CDD STKc_IRAK 604 877 - -
Mibi07g1927 954 FunFam Receptor-like kinase TMK4 33 328 - -
Mibi07g1927 954 ProSiteProfiles Protein kinase domain profile. 598 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1927 954 Gene3D Ribonuclease Inhibitor 331 456 IPR032675 -
Mibi07g1927 954 SMART LRR_typ_2 93 115 IPR003591 -
Mibi07g1927 954 SMART LRR_typ_2 418 445 IPR003591 -
Mibi07g1927 954 SMART LRR_typ_2 116 139 IPR003591 -
Mibi07g1927 954 SMART LRR_typ_2 240 262 IPR003591 -
Mibi07g1927 954 SMART LRR_typ_2 263 286 IPR003591 -
Mibi07g1927 954 FunFam receptor protein kinase TMK1 559 675 - -
Mibi07g1927 954 FunFam receptor protein kinase TMK1 676 893 - -
Mibi07g1927 954 ProSitePatterns Protein kinases ATP-binding region signature. 604 626 IPR017441 GO:0005524
Mibi07g1927 954 SUPERFAMILY L domain-like 45 438 - -
Mibi07g1927 954 MobiDBLite consensus disorder prediction 912 954 - -
Mibi07g1927 954 Pfam Protein kinase domain 599 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1927 954 PANTHER OSJNBA0070M12.3 PROTEIN 19 954 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1927 Mibi-ChrMibi07 40606558 40609961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1927 84 880 Receptor kinase-like Gene Family AT5G07280 32.195 1.09e-91 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mibi07g1927 Pkinase 1.1e-46 CL0016