Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1906 ATGCTTTCTTCGCAATGTGAACAAGATTATTGTTTCAACATTAACGATAATAGGTCAATGGAGGTGCATTACATAGATACGGGCTTTCCTTACACTGTAACTGAAAGCTTCATGGACTTCTTTGAAGGCATCACGTATGTGCCAACGAATTGTCTCTATACGGGATCCGTGCCTCATCAGGAAAGTGCCAACTGGATGATGAATATGAGCCCATATAAATATGACATGTCTGGCCCTTTGTGTCCATCTTATTTTGGTTATCCTGAATATATCCTTCCCTTACCAAGGATGGAGGTCAACAGGGGACAGTGGGAAAGCCCTTCACCAATGACTATTGAGGAGCCTGCAACAACAGACTCTTTGTCCAGAAGAGATGGAGTCACTGGCATGCAGACCATTCCTGAAGAATGCAGCCCTAATCATCAAGATTCACCTGGTCCTCAGGTTGTATGGCAGCAAGACAGTATTGATCCTGATAACATGACTTATGAGGAATTACTGGATTTGGGTGAGGCAGTTGGAACTCAAAGCAGGGGCCTTTCTAAAGAACTTATTGATTCACTTCCAGTCTCAAAGTACAATTTTAAAAGCATGTTTAAAAGAAAAAATTATGGGAAAAGGTGTGTGATTTGTCAGATGACATACAAAAGAGGTGACCAACAAATGAAATTGCCATGCACGCATGTTTACCATAGTGAATGCATCTCCAAATGGCTTAGCATTAACAAGAAGTGCCCAGTTTGCAACACTGAGGTATTTGGCGAGGATTTGAGGAATCAGCATTAG 786 0.4173 MLSSQCEQDYCFNINDNRSMEVHYIDTGFPYTVTESFMDFFEGITYVPTNCLYTGSVPHQESANWMMNMSPYKYDMSGPLCPSYFGYPEYILPLPRMEVNRGQWESPSPMTIEEPATTDSLSRRDGVTGMQTIPEECSPNHQDSPGPQVVWQQDSIDPDNMTYEELLDLGEAVGTQSRGLSKELIDSLPVSKYNFKSMFKRKNYGKRCVICQMTYKRGDQQMKLPCTHVYHSECISKWLSINKKCPVCNTEVFGEDLRNQH 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1906 261 SUPERFAMILY RING/U-box 207 253 - -
Mibi07g1906 261 SMART ring_2 208 248 IPR001841 -
Mibi07g1906 261 Pfam Ring finger domain 207 249 IPR001841 -
Mibi07g1906 261 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 17 255 IPR033276 GO:0004842|GO:0016567|GO:0046621
Mibi07g1906 261 MobiDBLite consensus disorder prediction 104 124 - -
Mibi07g1906 261 FunFam E3 ubiquitin ligase BIG BROTHER 170 253 - -
Mibi07g1906 261 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 170 253 IPR013083 -
Mibi07g1906 261 ProSiteProfiles Zinc finger RING-type profile. 208 249 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1906 Mibi-ChrMibi07 39976746 39982210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1906 16 255 C3H Transcription Factor Family AT3G63530 52.066 5.07e-84 249