Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1901 ATGGGGAAGGACAAAATGAACAAAAACAACAATAGTAATAAGAGCAAGCTGAGGAAAGGGTTGTGGTCTCCGGAGGAAGATGAGAAGCTAATGAGATACATGTTGACGAATGGACAAGGTTGTTGGAGTGACATTGCCAGAAATGCCGGACTTCTTCGCTGTGGCAAAAGTTGTCGTCTGCGTTGGATCAATTACCTTAGACCTGACCTGAAACGTGGTGCTTTTTCTCCTCATGAGGAACACCTCATCATTCATCTTCACTCACTTCTTGGCAATAGATGGTCTCAAATTGCTGCACGTCTTCCTGGAAGAACAGACAATGAGATTAAGAATTTCTGGAACTCTACATTGAAGAAAAGGTTCAAAAATAACAACATTTTTTCCTCATCTTCATCACCAAACAACTCTTCATCTTCTACATCTTCATCATCAGAACCTAAAAATCATGCCTTGTTCAGTGGAAACTCAAGCATGATCGACCCATTAATAATGCCCACGTCATCATCTTCCTTGTCGATGCAAGTCCCTATCATTTTCGGAGATCAATTAGTTTCCGATACATTTTTCACTATGAACAATAATAGTATCGAAGGAGCTGGGAATTTTCCTTTACCTGCAGATCAAGTTGGGAATATAGAAGAAGGGTTTTATAATAATGGAGATTATGGGACAATATTACTAGAGCCTAGTTGTAACATTATGGAAAGTGGTATTCGAGGCAATAATATTGAGGGCAATATTGTCCCAAAATTTGATGATGATCTTATTAGTGTGAAAAGCCACTACAACAACTTCAATAATAGTTGCTTCAATTACACTAATGATCATCATCAAATAATTCAGAGCTCAATAAGTAAAGTAGAGGAGGAAGAGGGCATGTTTGGGTTTGGAAATAGCAAGATCATCAATGATCATAACTTGGGAGAAAGCGTAGTGGGAGATCAATGGGATTTTGAAGGCTTAATGCAAGACATGTCTTCTTTTCCCTTCCATGATTTTTCCAAGTTGGTCGAATAA 1017 0.3845 MGKDKMNKNNNSNKSKLRKGLWSPEEDEKLMRYMLTNGQGCWSDIARNAGLLRCGKSCRLRWINYLRPDLKRGAFSPHEEHLIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTLKKRFKNNNIFSSSSSPNNSSSSTSSSSEPKNHALFSGNSSMIDPLIMPTSSSSLSMQVPIIFGDQLVSDTFFTMNNNSIEGAGNFPLPADQVGNIEEGFYNNGDYGTILLEPSCNIMESGIRGNNIEGNIVPKFDDDLISVKSHYNNFNNSCFNYTNDHHQIIQSSISKVEEEEGMFGFGNSKIINDHNLGESVVGDQWDFEGLMQDMSSFPFHDFSKLVE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1901 338 Pfam Myb-like DNA-binding domain 72 116 IPR001005 -
Mibi07g1901 338 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Mibi07g1901 338 Gene3D - 16 72 - -
Mibi07g1901 338 FunFam Transcription factor MYB46 73 148 - -
Mibi07g1901 338 CDD SANT 22 66 IPR001005 -
Mibi07g1901 338 PANTHER MYB DOMAIN PROTEIN 55 9 285 - -
Mibi07g1901 338 MobiDBLite consensus disorder prediction 1 20 - -
Mibi07g1901 338 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Mibi07g1901 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Mibi07g1901 338 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Mibi07g1901 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Mibi07g1901 338 Gene3D - 73 149 - -
Mibi07g1901 338 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Mibi07g1901 338 CDD SANT 74 117 IPR001005 -
Mibi07g1901 338 SMART sant 18 68 IPR001005 -
Mibi07g1901 338 SMART sant 71 119 IPR001005 -
Mibi07g1901 338 MobiDBLite consensus disorder prediction 126 150 - -
Mibi07g1901 338 FunFam MYB transcription factor 16 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1901 Mibi-ChrMibi07 39912684 39914947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1901 11 333 MYB Transcription Factor Family AT3G08500 47.493 6.72e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi07g1901 Myb_DNA-binding 2.4e-12 CL0123