Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1892 ATGGAGTCAGAAGGAGAAGCAGGGGGAAAGCCTATGACAGTGTTGGGTGGCCAAGTCTGTCAGATCTGTGGTGATAATGTTGGGAAGACCGTGGATGGTGAGCCATTCATTGCATGCGATGTTTGTGCTTTTCCTGTATGCAGGCCATGTTATGAGTATGAAAGGAAGGATGGGAATCAGTCTTGTCCTCAGTGTAAAACCCGATACAAGAGGCACAAAGGAAGTCCTGCAGTTGGTGGAGATAGGGAAGAGGATGTGGCTGCTGCTGATGGTGCTAGTGATTATGAGACAGAAAGCCAAAACCCAAAGAAGATTTCCGAGCGCATGCTGAGCTGGCAAATGAAATATGGCCAGTCAGAGGAGGTCGGTGCTCCAAAGTATGATAAGGAGGTTTCTCACAACCACATTCCTTTGCTAACCGGTGGAAAAGAGGTCTCTGGAGAATTATCAGCTGCCTCACCTGAGAGGCTCTCAATGGCATCTCCTGGAATTGGTGGTGGCAAACGGGGCCATAATCTGACATATTCATCAGATATTAATCAATCACCAAATATTAATGGAGGAATGGGTAATGTGGCATGGAAAGAAAGAGTTGATGGCTGGAAGATGAAGCAGGAAAAGAATTCCGTTCCAATGAGCACTGGCCATCCAATGAGTGTTGGCCAAGCTACCTCTGAAAGAGGAGCTGGAGATATTGATGCCAGTACTGATGTGCTTATGGATGATTCCTTGTTGAATGATGAAGCTCGACAGCCGCTTTCAAGGAAGGTTTCTGTTCCATCATCTAGGATTAATCCATATCGTATGGTCATTGTTCTACGGTTGATTATCCTTTGTATTTTCTTGCATTACCGAATAACAAATCCCGTACCCAATGCATATGCATTGTGGTTGATTTCGGTCATATGTGAGATTTGGTTTGCCATATCTTGGATTTTGGATCAGTTCCCCAAGTGGCTCCCTGTGAACCGTGAAACATATCTTGACAGGCTCTCACTCAGGTATGAACCGGAAGGAGAGCCATCGCAACTAGCTGCTGTGGACATTTTTGTCAGTACTGTCGACCCTTTAAAGGAGCCCCCACTTGTGACTGCCAATACGGTCCTATCTATTCTTGCTGTCGATTACCCAGTTGATAAGGTCTCCTGCTATGTATCTGATGATGGTGCTGCTATGCTGACATTTGAAGCTCTGGCTGAGACATCAGAGTTCGCAAGAAAATGGGTTCCTTTTTGCAAGAAGTACAATATTGAGCCTCGGGCACCAGAGTGGTACTTTGCACTGAAGGTTGACTACTTGAAGGATAAGGTTCATCCATCATTTGTCAAAGAACGCAGAGCCATGAAGAGAGAATATGAAGAATTCAAAGTTCGTATTAATGGACTTGTTGCAAAGGCACAAAAAGTTCCTGAAGAAGGATGGGTAATGCAAGATGGCACTCCATGGCCTGGAAACAACATTAGAGACCATCCAGGAATGATCCAGGTGTTTTTGGGCCAAAGTGGAGGACTTGACTCTGATGGTAATGAGTTGCCACGCTTAGTTTATGTTTCTCGTGAAAAGCGTCCTGGTTTCCAACATCATAAGAAGGCCGGTGCCATGAATGCACTGGTTCGTGTATCAGCTGTTCTTACTAATGGTCCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCCTTGAGGGAAGCTATGTGTTTCATGATGGATCCCAACCTTGGGAAAAATGTTTGCTATGTCCAGTTCCCTCAAAGGTTTGATGGTATTGATAGGAACGATCGATATGCCAATCGTAACACCGTTTTCTTTGATATTAATTTAAGAGGTTTGGATGGAATTCAAGGACCTGTGTATGTCGGTACTGGATGTGTCTTCAATAGAACGGCCTTATATGGTTATGAACCTCCTGTTAAACCCAAGAAGAATAAGAAACTTGGGTTGCTGTCTTCACTCTGTGGAGGAAGTCGAAAGAAGAAGTCAAAATCTAGCAAGAAAGGCTCAGACAAGAAAAAATCTGGCAAAAATGTTGACCCAACTGTGCCCATCTTCAACCTAGAAGATATAGAAGAAGGAGTTGAAGGTGCTGGATTTGATGATGAGAAAACACTACTTATGTCACAAATGAGCCTTGAGAAAAGGTTTGGTCAATCTGCTGTTTTTGTTGCGTCTACGCTTATGGAGAACGGTGGTGTTCCTCAGTCTGCTACCCCAGAAACTCTTCTTAAGGAGGCTATTCATGTTATCAGCTGTGGTTATGAGGATAAGTCAGAATGGGGAACTGAGATTGGATGGATCTATGGTTCTGTGACAGAAGATATTCTCACTGGATTTAAGATGCATGCTCGTGGGTGGAGGTCTATTTACTGCATGCCCAAGCTTCCAGCATTTAAAGGTTCAGCTCCTATCAATCTTTCAGATCGTTTGAACCAAGTGCTTCGATGGGCTTTGGGTTCTGTGGAAATTCTTCTAAGTAGACATTGTCCCATCTGGTATGGTTATAGTGGAAGGCTCAAATGGCTTGAGAGGTTCGCTTATGTTAACACCACAATCTATCCAGTCACTTCCATTCCCCTCCTCATGTACTGTACCTTGCCAGCCGTTTGTCTCCTCACCAACAAGTTCATTATCCCACAGATTAGCAACATTGCAAGTATATGGTTTATCTCCCTCTTTCTTTCCATTTTCGCAACTGGTATCCTTGAGATGAGATGGAGTGGTGTTGGAATCGACGAGTGGTGGAGAAATGAACAATTTTGGGTCATCGGTGGTGTCTCCGCCCATCTTTTCGCCGTGTTCCAAGGTTTACTCAAAGTACTCGCTGGAATTGACACAAACTTCACTGTCACATCCAAAGCATCAGATGAAGATGGTGACTTTGCTGAACTCTACATGTTCAAATGGACAACCCTCCTCATCCCTCCCACCACCCTCATCATCATCAACCTTGTTGGCGTCGTCGCCGGCATCTCCTACGCCATTAACAGTGGTTACCAGTCGTGGGGCCCACTCTTTGGCAAGCTTTTCTTTGCCTTCTGGGTCATCATCCATCTCTACCCTTTCCTCAAAGGTCTCATGGGAAGGCAGAACCGTACACCTACCATTGTTGTTGTTTGGTCCATTCTTCTTGCCTCCATCTTCTCTTTGTTGTGGGTCCGGATTGACCCGTTTACGACCCGGGTCACTGGCCCGGATTCTGAGCAATGTGGAATCAACTGCTAG 3231 0.4488 MESEGEAGGKPMTVLGGQVCQICGDNVGKTVDGEPFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAVGGDREEDVAAADGASDYETESQNPKKISERMLSWQMKYGQSEEVGAPKYDKEVSHNHIPLLTGGKEVSGELSAASPERLSMASPGIGGGKRGHNLTYSSDINQSPNINGGMGNVAWKERVDGWKMKQEKNSVPMSTGHPMSVGQATSERGAGDIDASTDVLMDDSLLNDEARQPLSRKVSVPSSRINPYRMVIVLRLIILCIFLHYRITNPVPNAYALWLISVICEIWFAISWILDQFPKWLPVNRETYLDRLSLRYEPEGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFCKKYNIEPRAPEWYFALKVDYLKDKVHPSFVKERRAMKREYEEFKVRINGLVAKAQKVPEEGWVMQDGTPWPGNNIRDHPGMIQVFLGQSGGLDSDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPVKPKKNKKLGLLSSLCGGSRKKKSKSSKKGSDKKKSGKNVDPTVPIFNLEDIEEGVEGAGFDDEKTLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKSEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYSGRLKWLERFAYVNTTIYPVTSIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLIIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDSEQCGINC 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1892 1076 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 94 IPR013083 -
Mibi07g1892 1076 MobiDBLite consensus disorder prediction 74 89 - -
Mibi07g1892 1076 FunFam Cellulose synthase 464 638 - -
Mibi07g1892 1076 SUPERFAMILY Nucleotide-diphospho-sugar transferases 361 889 IPR029044 -
Mibi07g1892 1076 FunFam Cellulose synthase 3 94 - -
Mibi07g1892 1076 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 250 1043 - -
Mibi07g1892 1076 MobiDBLite consensus disorder prediction 208 227 - -
Mibi07g1892 1076 SUPERFAMILY RING/U-box 5 87 - -
Mibi07g1892 1076 Pfam Cellulose synthase 347 1069 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mibi07g1892 1076 CDD mRING-HC-C4C4_CesA_plant 18 68 - -
Mibi07g1892 1076 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 495 638 IPR029044 -
Mibi07g1892 1076 MobiDBLite consensus disorder prediction 70 102 - -
Mibi07g1892 1076 Pfam Zinc-binding RING-finger 10 85 IPR027934 -
Mibi07g1892 1076 MobiDBLite consensus disorder prediction 654 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1892 Mibi-ChrMibi07 39652977 39659933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1892 1 1076 Glycosyltransferase AT5G05170 85.093 0.0 1894