Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1880 ATGAAGAGGTTGAGGTCTAGCGAGGATCTCCATTCTTATGGAGACAGCAAGAATAATGGGTGTAAGGATTCGAATCTGAACAGTCGATCTTCGTCTTCTTCGCATCGAACATTTTATTACAAGCCTGATAATAATAATAATAATGTGCGCAAGGGTTTGCTTTCGTCGTCGTCGTCCTCTCGGTATGACAGGGATCGAAGTATGGATGAGGATCGGGAAGGTTCTAGGTTGGTTAGGAAGCGATCGGATCATGATTTTGATGGTTTTGATCGAAGAAAGGGGTTTGATCGAAATAGAGGGTATGGAGGTGGAGGAGGAGATAGGGGTTTGATTCAGAGGTCTGAGAGTTTTTGTGGTTCTTCAAGGAGGGATTTTCCTAAGGGGTTTCGGTCTGAGAGGGATCGGTCTAGGAGGGAAGGGAGTGTGTCTTCTTGGAGGAGATTCGGTGGTGGGTTGAAGGATTTTGATGATAGTGGAAGGGTAAGTAGTAGGGTTGGATTGGAAGATAGAGTTGTACGGTCTCCGAGGAGTTTGAGGGATGTGAAGTCTCCCTCATGGTCTAAAGATTCTGAGAGTGAGCATTCTAAGATGAGTGAGCAGTCTAAGATGAGGTCTTCTTCAAGGGGGTCAAGAGATGCGAAGTCCAAGTCCAAGTCTCCATCTTGGTCCAAGGATTCAGAGAGTGAGCAATCAAAGAGTGAGCAATCGAAGTTTGAGCAGCAATCCAAGAGTGTTGAGGTGAAGAAAGCTGAGGAATTGCAGGTTGAGAGCCGTAGTAGTAGTGAAATGGAAGAAGGAGAACTGGAGCCAGAACCTGTGCCTGTAACAGAACCAGAAAAGGCTTCTTCTGATGCTGCACCTAAGAATGAAGACCAGACCCCTATTCCTATGGATGCTGCTGATGACAAGGAAAGAATCCAGTCTGAAAGCCAGCTCAATGGTACAGATACTACTATGCATGAAAGAGGGGAGGAGTTTAATAAAGAAGAGGCAAAGCCTGAAGAGGATACAGATTCAGCAGAACAGAATGCAGGGAAAGATGATAAGCCGCCAGATGTTCACAATGATCCAACTGATGAAGCGGATGATGCCGAAAATGAAATTGAAACTTCTGTTCACAGTGAGAACAAGGCACAAGAGAGTTCGAAAGTTGAAACTGCGTGTGAGGGGGAAACAAAGGGAGGTGGGGAGCATGAGAATCCATTGCTTCATGAAGAGGAACATAAGCAGGACAAGGGTGTAGATCTTGAAACCAGGGTAGACTCTGACAAACCAGAGCCACAGAAGGAAGTGTCAAGAGAAAATGAAGTGCTTAAAACAGATGGGGAAATGACGATGGAGGTTGTGAACAACAACGTGAAGGATAAAGGCAAAAGTGTCTCTGTTACCCCCACTGATGTTGTTCATCCTTGTGAAGATGGTTTGTGGAATGACCGAGGGCGCAGAGATCTCACGATATGCTCTGGTGATGCCATGGAAGGTCCAAGCACAAGGGGATTTGAGTTGTTTTCCAGATCTCCTGTTAGGAAAGCAGAGAAAACTGACCAATCAAGTCTCAGCAAAAATAAAGATGGAAGTCTTTCAATGGAGGAGCTTGATCTTTCTCTTAGCTTGCCTAATGTTTTGTTACCTATTGGGGCTCATGAGACTGCACCGGCCCCTGGATCCCCCAGTCAAGCTCGAAGTGTACAGTCTTTGAGTTCATTTCGCACCAACTCAGATGGATTTACCGCGTCAATGTCTTTCTCAGGCTCTCAATCTTTTTACCACAATCCAAGCTGTTCTCTCACACAAAATTCAATCGACTACGAACAATCTGTTCATAGTCGGCCATTATTTCAGGGAATAGATCAAGTTTCGCAGGGAGGCTGGCAAGGTCAGTCTCAGACTGATTCCAAACAGAAAGAAATCCCTTTCTGTCAAGGACCTTTGATGAATGGTAGTGGCACTTTTTCTCAGTCTCAAGCATCATGGGGCATTTTGGATGGTCAAGTTGTGAAAGGTCAGCCTTCTAGGGTTCTTGAAGGTAGCTCAAAAATGGCCAGTGGGCTTGACAGGCAATTGAGTTTTCATAAGCAGCTGTCAGGACAGTCAAGGCGCCATGATGATGTCAGATCTCCTTCACAGAGTGTTGGTTCTCATGACATTGGATCAAGTTATAGTTTTGACAAGAAGAGGGAAATGAGAGAAAGGAGTAATGGTAGTTTATATAGAACTGCAAGCCAGAAGCAACAAGAACAGTTTCAGATGGGTGGAACCGAGTTTGTTGAGACAATCATTGTGAAAATAGTTTCTGAACCAGTGCCTGCAATGGCTAAAAAGTTTCATGAAATGTCTGGACAGACGTTATCATGTTTGAAAGAAAGCATTCGTGAGATTATGCTCAATGCTGATAAGCGTGGGCAAATACTTGCTTTTCAGAAAGTTCTTCAAAACAGGTCTGATATAACCTTGGATGTTTTACTAAAGGCCCACCGAGTTCAATTGGAAATTTTGGTTGCTTTGAAAACAGGTTTAACTAACTTTACTCAGTTAGACAACAGCATTTCGGCTTCCGATTTAGCTGAGATTTTTCTGAACTTAAGATGTAGGAATCTTTTATGCCGAAGTCAGCTGCCTGTGGATGAATGTGATTGCAAAGTTTGTGCACAGAAAAGTGGCTTTTGCAGGGAATGTATGTGTCTTGTGTGTTCTAAGTTTGACAATGCATCAAATACATGTAGTTGGGTCGGATGTGATGTTTGCCTTCACTGGTGCCATACGGACTGTGGACTACGGGAGTCATATATTAGAAATGGACTTAGTGCTACTGGGGTACAAGGGGTGACTGAGATGCAATTTCATTGTATTGCCTGTGATCATCCTTCAGAGATGTTTGGTTTTGTCAAGGAAGTGTTTCTGAATTTTGCAAAAGATTGGTCAGTTCAAGCTCTTTGCAAGGAGCTTGAATATGTGAAGAGAATATTTTCTGCCAGCAAGGACATGAGAGGGAGACAGCTGCATGAGGTTGCCGATCAAATGCTGCTAAGGTTGGCAAATAAGTCTAACCTTCAAGAAGTTTATAGCCACATCATGTCTTTCCTAAATGACGGTGATTCATCCAAATCAGCCTTGACACGGGACTTTTCTGGGAAGGAACCAATTAAAGAAAAGAATGCAGTTGCTGAGCCCAGCCAGGAAGCTGCCTGGATGAAATCAATCTATTCCGAAAAGATGCCTCTGTTAGAACGGCCAAGAAACATCCTTTCAAGCTATGACCGGAATGATAAACGGGCTCCACCACAAGACTTGCAAATGAGTGTCCCAAAGGATTATTGTTTCGATGAATTGGATAGTATAATAAAAATTAAACTGGCAGAGGCTAAAATGTTTCAAACACGAGCGGACGATGCCAGAAGAGATGCTGAAGGCCTGAAGCGCATTGCCCTTGCAAAGAATGAGAAAGCTGAAGAAGAGTATGCCAACCGAATCTCAAAGTTGCGACTGGCAGAGACCGAGGAAATGCGTAAACAAAAATTTGAAGAACACCAGGCATTGGAAAGAGCGCATCTGGAGTACTTCAACATGAAAATGAGAATGGAAACAGACATTAAGGATCTGTTATTGAAAATGGAGGCGACCAAAAGGAGTCTTGCCATGTGA 3642 0.4374 MKRLRSSEDLHSYGDSKNNGCKDSNLNSRSSSSSHRTFYYKPDNNNNNVRKGLLSSSSSSRYDRDRSMDEDREGSRLVRKRSDHDFDGFDRRKGFDRNRGYGGGGGDRGLIQRSESFCGSSRRDFPKGFRSERDRSRREGSVSSWRRFGGGLKDFDDSGRVSSRVGLEDRVVRSPRSLRDVKSPSWSKDSESEHSKMSEQSKMRSSSRGSRDAKSKSKSPSWSKDSESEQSKSEQSKFEQQSKSVEVKKAEELQVESRSSSEMEEGELEPEPVPVTEPEKASSDAAPKNEDQTPIPMDAADDKERIQSESQLNGTDTTMHERGEEFNKEEAKPEEDTDSAEQNAGKDDKPPDVHNDPTDEADDAENEIETSVHSENKAQESSKVETACEGETKGGGEHENPLLHEEEHKQDKGVDLETRVDSDKPEPQKEVSRENEVLKTDGEMTMEVVNNNVKDKGKSVSVTPTDVVHPCEDGLWNDRGRRDLTICSGDAMEGPSTRGFELFSRSPVRKAEKTDQSSLSKNKDGSLSMEELDLSLSLPNVLLPIGAHETAPAPGSPSQARSVQSLSSFRTNSDGFTASMSFSGSQSFYHNPSCSLTQNSIDYEQSVHSRPLFQGIDQVSQGGWQGQSQTDSKQKEIPFCQGPLMNGSGTFSQSQASWGILDGQVVKGQPSRVLEGSSKMASGLDRQLSFHKQLSGQSRRHDDVRSPSQSVGSHDIGSSYSFDKKREMRERSNGSLYRTASQKQQEQFQMGGTEFVETIIVKIVSEPVPAMAKKFHEMSGQTLSCLKESIREIMLNADKRGQILAFQKVLQNRSDITLDVLLKAHRVQLEILVALKTGLTNFTQLDNSISASDLAEIFLNLRCRNLLCRSQLPVDECDCKVCAQKSGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGLSATGVQGVTEMQFHCIACDHPSEMFGFVKEVFLNFAKDWSVQALCKELEYVKRIFSASKDMRGRQLHEVADQMLLRLANKSNLQEVYSHIMSFLNDGDSSKSALTRDFSGKEPIKEKNAVAEPSQEAAWMKSIYSEKMPLLERPRNILSSYDRNDKRAPPQDLQMSVPKDYCFDELDSIIKIKLAEAKMFQTRADDARRDAEGLKRIALAKNEKAEEEYANRISKLRLAETEEMRKQKFEEHQALERAHLEYFNMKMRMETDIKDLLLKMEATKRSLAM 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1880 1213 MobiDBLite consensus disorder prediction 17 61 - -
Mibi07g1880 1213 MobiDBLite consensus disorder prediction 692 745 - -
Mibi07g1880 1213 MobiDBLite consensus disorder prediction 295 309 - -
Mibi07g1880 1213 MobiDBLite consensus disorder prediction 125 142 - -
Mibi07g1880 1213 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1147 1169 IPR004082 -
Mibi07g1880 1213 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 854 875 IPR004082 -
Mibi07g1880 1213 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 900 920 IPR004082 -
Mibi07g1880 1213 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 774 796 IPR004082 -
Mibi07g1880 1213 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 813 828 IPR004082 -
Mibi07g1880 1213 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 973 992 IPR004082 -
Mibi07g1880 1213 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 828 843 IPR004082 -
Mibi07g1880 1213 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1108 1128 IPR004082 -
Mibi07g1880 1213 Pfam Coiled-coil region of Oberon 1085 1201 IPR032535 -
Mibi07g1880 1213 MobiDBLite consensus disorder prediction 1 445 - -
Mibi07g1880 1213 MobiDBLite consensus disorder prediction 505 519 - -
Mibi07g1880 1213 Pfam PHD - plant homeodomain finger protein 863 986 IPR032881 -
Mibi07g1880 1213 MobiDBLite consensus disorder prediction 62 98 - -
Mibi07g1880 1213 MobiDBLite consensus disorder prediction 488 526 - -
Mibi07g1880 1213 Coils Coil 1132 1182 - -
Mibi07g1880 1213 MobiDBLite consensus disorder prediction 719 733 - -
Mibi07g1880 1213 MobiDBLite consensus disorder prediction 1 16 - -
Mibi07g1880 1213 MobiDBLite consensus disorder prediction 367 441 - -
Mibi07g1880 1213 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1211 IPR004082 -
Mibi07g1880 1213 MobiDBLite consensus disorder prediction 150 265 - -
Mibi07g1880 1213 MobiDBLite consensus disorder prediction 548 567 - -
Mibi07g1880 1213 MobiDBLite consensus disorder prediction 318 357 - -
Mibi07g1880 1213 CDD PHD_OBE1_like 893 952 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1880 Mibi-ChrMibi07 39473434 39477701 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1880 863 1011 PHD Gene Family AT5G57380 27.517 1.07e-12 70.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi07g1880 07 39473434 39477701 Mibi07g1880 07 39473434 39477701 ECH