Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1867 ATGGCTGAACCCCGCCGTAAGCGCCCCAAAATTTCCAGGGGAGAAGATGATTTTATGCCTGGAAGCATTATCGAGATTGAGCTTCTTAAGTTTATGACCTTTGACTATTTAAAATGTAAACCTGGTCCTCGTCTGAATCTTGTTATTGGACCCAATGGCTCTGGGAAGAGTTCTCTTGTGTGTGCCATTGCACTTGGCCTTGGGGGTGAGCCTCAGCTGCTAGGACGGGCAACAAGTGTTGGATCGTATGTGAAGCGGGGAGAAGAATCAGGTTGCATTAAGATTACATTGAGAGGGGATAGTAAAGATGAGCACATCACTGTTATTCGGAAAATAAATACAAGTAACAAGTCTGAATGGTTGTTCAATGGAAACGTAGTGCCCAAAAAGGAAATGATGGAAGTCATTCAACGGTTTAACATCCAAGTTAATAATTTGACTCAATTTTTACCCCAGGACAGGGTTTGTGAATTTGCTAAATTAACTCCTGTGCAACTTCTGGAAGAGACTGAAAAGGCTACCGGTGATCCCCAACTTCCAAGCCTTCACCGTGCTCTTGTTGAAAAAAGCCGTGCATTGAAACAAATTGAGCTGACAGTGAAGAAAAATGAGGAAACTTTGAAACAGCTAAAGGATCTTAATGCTGAACTTGAGAAGGATGTTGAACGTGTCCGTCAAAGGGATGAACTACTTAAAAAGGCTGAGTCCATGAAAAAGAAAGTGCCGTGGCTAAGATATGATATGAAGAAGGCTGAATACTTGGAAGCTAAAGAACGTGAAAATGATGCTAAAAGGAAGATGGAGGAAGCTGCAAAGATGCTAAATGATCTGAAAGAACCTATTGAGAAACAGAAAAAGGACAAGGCAGCAATGGATGCAGAATGTAAAAAAGTTTCCAACCTTATAAATGGCAATGCCAAGAAGCGAATGGAACTTCTGGAGAAAGAAAATTATCTGGGTGTGGAATTACAAGGAAAATACAACGAAATGGAAGATTTGAGGAGGCAGGAAGAAACTCATCGGCAAAGACTTTTAAAGGCTAAGGAGGAACTTGCTGCTGCTGAACATGAACTGGAGAAGCTACCTCATTATGAACCTCCAAAGGAAGAGATTGAAAGATTAAAAGGTGAAATTTTGAATTTAGAAAATTCTGCATCTCAAAAGAGGCTAGAGAAGTCAGAAACAGACAAATGTTTATACCAGAAAAAGTCATCATTGGCACAGTGTATGAACAGGTTGAGGGAGATGGATAGTAAAAATACCAAGTGTTTGCATGCGTTACAAGAGTCAGGGGCAGATAGGATAATGGAAGCTTATAAATGGGTGCAAGATAATCGCCATTTATTCAATAAGGAAGTTTATGGTCCTGTATTGCTGGAGGTTAATGTGTCAAAGCAGACTCATGCTGCCTTCCTCGAGGGTCATGTTCCTTATTACATCTGGAAGTCTTTCATCACTCAAGATTCTGGAGATCGGGACCTTTTGGTAAAAAATCTAAAATCCTTTGATGTTCCAGTATTAAATTATACTGGTGGTGATGGTAGTCAGAGCGAGCCTTTTCAAATTTCTGAAGATATGCGTACTCTTGGTATCTACTCCCGTCTCGATGAAGTTTTTGATGCTCCTACTGCTGTTAAGCAGGTTTTGATTGGACAGTTTGGTCTGGATCATTCATATATTGGAACCAGAGAAACTGACCAGAAAGCAGATTCGGTCCAACAATTGGGCATTTTTGACTTTTGGACTCCAGATAATCACTATCGTTGGTCTAAGTCTAGATATGGGAATCATGTATCAGGAGTTGTTGAACAAGTACAACGCTCAAGACTTCTTTCATATAGTAGACTTTTGTTCTTTTCAGATATAGACGCTAGAGAAATTGAGAAGCTCAGGTCTCACAGAATGGACCTTGAGGAATCTGTAGCAACCTTGGAAGAAACTTCTAAGAGGTTACAAGATGAGGAGAGACGCCTAAGCAATGAAGCAGCTAATCTTCGCAGACAGAGGGATGAAATAAACACTACAGTACTTAAAGAGAAGGAAAAGCGCAGGGATATCATGCGCACTATTGAACTGAGGAAAAGGAAATTAGAATCCATGGCGGAGGACGGTGATGTGGATATAGTTATTGCTAAGCTGACTGATGAAGCAAGAAAGTGTAATATTCAGCGATTCTGCAATGCAATCAAAATTAAGAACCTACTTCTTGAGGCAATTGGTTATAGACGGAGTTATGCTGAAAAACATATGGCTACTCTTGACTTTGATGCTAAGATTAGGGAGTTGGAGGCTGGTTTGAAGCAGCATGAGAAGCTTGGTTTGCAAGCATCATTACACTTTGATACCTGCAAGAAGGAGACTGAGAATTGTCGACAGCAGCTTTCAGAATGTTTGAGGCGTGCTGAATCAATTGCTCCCATCACTCCTGATCTTGAGAGAGAATTTCTTGAGATGCCCACTACTATTGAGGATTTGGAAGCTGCTATCCAAGACACCACTTCTCAAGCCAATTCTATACTTTTTGTTAATCATAATGTGTTGGAACAATATGAAAACCGTGAACGTCAGATAGGGTCTTTAGCCACAAAACTTGAAGAAGATAAGAAAGAAGTACATAGGTGTCTAACTGAAGTAGATACCTTAAAGGGGACCTGGCTTCCAACATTGAGGAACCTTGTGGCTCAGATAAATGAAACTTTCAGTCGTAATTTCCAAGAGATGGCTGTTGCAGGAGAAGTTTCACTAGATGAGCGTGATGTGGACTTCGATCAGTTTGGGATACTCATAAAAGTGAAGTTCAGACCAACTGGACAGCTTCAAGTTCTGAGTGCCCACCATCAGTCTGGAGGGGAGCGTTCAGTTTCTACTATTCTTTATCTTGTTTCTCTTCAAGATCTTACTAACTGCCCATTCAGAGTGGTTGATGAGATTAATCAAGGCATGGACCCAATAAATGAAAGAAAAATGTTCCAGCAACTAGTGCGAGCTGCCAGCCAACCAAATACACCACAATGTTTCTTGCTTACCCCAAAGTTGTTGCCAGATCTGGAATACAGCGAAGTGTGCAGTATATTAAATGTAATGAATGGACCTTGGATTGAGAAAGTCTCAACAGTTTGGGGTGAAGGAGATCGATGGGGGCAAGTTGCAGGGTTGATGGTAGAGAATCGACGCTGA 3177 0.4101 MAEPRRKRPKISRGEDDFMPGSIIEIELLKFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLGGEPQLLGRATSVGSYVKRGEESGCIKITLRGDSKDEHITVIRKINTSNKSEWLFNGNVVPKKEMMEVIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKATGDPQLPSLHRALVEKSRALKQIELTVKKNEETLKQLKDLNAELEKDVERVRQRDELLKKAESMKKKVPWLRYDMKKAEYLEAKERENDAKRKMEEAAKMLNDLKEPIEKQKKDKAAMDAECKKVSNLINGNAKKRMELLEKENYLGVELQGKYNEMEDLRRQEETHRQRLLKAKEELAAAEHELEKLPHYEPPKEEIERLKGEILNLENSASQKRLEKSETDKCLYQKKSSLAQCMNRLREMDSKNTKCLHALQESGADRIMEAYKWVQDNRHLFNKEVYGPVLLEVNVSKQTHAAFLEGHVPYYIWKSFITQDSGDRDLLVKNLKSFDVPVLNYTGGDGSQSEPFQISEDMRTLGIYSRLDEVFDAPTAVKQVLIGQFGLDHSYIGTRETDQKADSVQQLGIFDFWTPDNHYRWSKSRYGNHVSGVVEQVQRSRLLSYSRLLFFSDIDAREIEKLRSHRMDLEESVATLEETSKRLQDEERRLSNEAANLRRQRDEINTTVLKEKEKRRDIMRTIELRKRKLESMAEDGDVDIVIAKLTDEARKCNIQRFCNAIKIKNLLLEAIGYRRSYAEKHMATLDFDAKIRELEAGLKQHEKLGLQASLHFDTCKKETENCRQQLSECLRRAESIAPITPDLEREFLEMPTTIEDLEAAIQDTTSQANSILFVNHNVLEQYENRERQIGSLATKLEEDKKEVHRCLTEVDTLKGTWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDERDVDFDQFGILIKVKFRPTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEVCSILNVMNGPWIEKVSTVWGEGDRWGQVAGLMVENRR 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1867 1058 Coils Coil 193 234 - -
Mibi07g1867 1058 Coils Coil 847 867 - -
Mibi07g1867 1058 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 4 1051 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Mibi07g1867 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 1001 IPR027417 -
Mibi07g1867 1058 Coils Coil 323 361 - -
Mibi07g1867 1058 FunFam Structural maintenance of chromosomes 5 854 1025 - -
Mibi07g1867 1058 Pfam RecF/RecN/SMC N terminal domain 23 998 IPR003395 -
Mibi07g1867 1058 CDD ABC_SMC5_euk 21 181 - -
Mibi07g1867 1058 Coils Coil 371 391 - -
Mibi07g1867 1058 Gene3D - 855 1017 IPR027417 -
Mibi07g1867 1058 Coils Coil 246 277 - -
Mibi07g1867 1058 Coils Coil 627 682 - -
Mibi07g1867 1058 Gene3D - 22 218 IPR027417 -
Mibi07g1867 1058 CDD ABC_SMC5_euk 931 1033 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1867 Mibi-ChrMibi07 39191570 39206266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1867 1 1049 Structural Maintenance of Chromosomes family AT5G15920 64.252 0.0 1384