Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1861 ATGTCCTTCAAACAAAGCCATCACCATCTTCTTCTTCTTCTTCTGTCTCTTTTCATAATTCTTTCATTAGTTTCTGATTTGGCCTTTGCTTTCCATGGAAACCAACAAGCAAAAACTCACGACAAGTTTCAGAAGCTAAAGTATTTGAGAGAACAAAATGATAATATTAAGATTTCAGGAATTGATAAGAGCCTTTTTGAAGCAGAAGAGATTGATATTGAAGCTCATGTTTATGATCAAGAAGGGTTGAAAGAGAAAGATATGATTGATAAACTTCCAGGTCAACCTCTTGCTAGGTTTTCTCAATATGGAGGATATGTGACTGTGGATGAAAAAGCAGGACGTGCCTTTTATTATTATTTCACTGAAGCTTTTAGTAATAAGGAGAATTTGCCTCTTGTTCTCTGGCTTAATGGAGGTCCTGGATGTTCATCTCTTGCCTATGGAGCTATGCAAGAACTTGGACCCTTCAGAGTCTACAGTGATGGAAAAACCCTTTTCAAAACTAGATATCCTTGGAACTATGCTGCAAATGTACTGTTCTTGGAGTCACCAGCAGGAGTGGGATTCTCATATTCAAACACAACATCAGATTATCAAAATAATGGAGATCAAAAAACAGCTTCAGATAATTATATCTTTTTGCTGAATTGGTTGGAGAGGTTTCCTGAATATAAGAACAGAGATTTCTTCATTACTGGAGAAAGCTATGCTGGTCACTATGTTCCTCAACTTGCTCAAACTATTCTCCTACACAACATCAAAGCCAACAAGACCATCATCAACCTCAAAGGAATTTTGATAGGGAATGCAGCGATAAATGATGAGACAGATGAAAAAGGAATGTACGATTTCCTAGGAAGCCATGCTATTATGTCGGATTCAACAACTTCTATTATTGACAAGTTCTGTGATTTCTCACCAAATGGTCAAAAACAAGCTAAAGAGTGCGATGAAGCTTTGAATGAATCGGACAGAGATTCTTACTACATTGATATCTACAACATCTATGCTCCTCTTTGCGACAACAACAATCTCACAGCCACCCCTAACCCCGTCTCTAATGTTATAGACCCGTGTAGTGACTATTATGTGATAGCATATATGAATAGAGAGGAAGTTCAAGAGGCACTTCATGCAAATGTCACAAAAGTGAACTTCGAGTGGTCACCTTGCAGTGATGTAATTACTCAGTGGAGTGATAGCCCCTCATCAACTCTTTTCCTCTTACGTCAGATCATGGACAATGGAATTCGGGTTTGGGTTTTCAGTGGAGACATAGATGGAAGAGTGCCAATTACATCAACACTATACTCTCTTAACACTATGAATATGCAAGTTAGCACTCCATGGCATCCTTGGTACTTCAATGGACAGGTTGCAGGGTACACACAAGTATACAAAGGAGATATAACATTGGCCACAGTAAGAGGTGCAGGGCATCAAGTGCCAAGCTTCCAGGCAGCAAGAGCACTTTCTCTGTTCAGACACTTCTTGGATGGCACTTCCCTTCCTGATACTGCTAGATATTAA 1533 0.3914 MSFKQSHHHLLLLLLSLFIILSLVSDLAFAFHGNQQAKTHDKFQKLKYLREQNDNIKISGIDKSLFEAEEIDIEAHVYDQEGLKEKDMIDKLPGQPLARFSQYGGYVTVDEKAGRAFYYYFTEAFSNKENLPLVLWLNGGPGCSSLAYGAMQELGPFRVYSDGKTLFKTRYPWNYAANVLFLESPAGVGFSYSNTTSDYQNNGDQKTASDNYIFLLNWLERFPEYKNRDFFITGESYAGHYVPQLAQTILLHNIKANKTIINLKGILIGNAAINDETDEKGMYDFLGSHAIMSDSTTSIIDKFCDFSPNGQKQAKECDEALNESDRDSYYIDIYNIYAPLCDNNNLTATPNPVSNVIDPCSDYYVIAYMNREEVQEALHANVTKVNFEWSPCSDVITQWSDSPSSTLFLLRQIMDNGIRVWVFSGDIDGRVPITSTLYSLNTMNMQVSTPWHPWYFNGQVAGYTQVYKGDITLATVRGAGHQVPSFQAARALSLFRHFLDGTSLPDTARY 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1861 510 ProSitePatterns Serine carboxypeptidases, serine active site. 232 239 IPR018202 GO:0004185
Mibi07g1861 510 Gene3D - 408 501 - -
Mibi07g1861 510 FunFam Carboxypeptidase 358 504 - -
Mibi07g1861 510 FunFam Carboxypeptidase 83 343 - -
Mibi07g1861 510 Gene3D - 360 397 - -
Mibi07g1861 510 Gene3D alpha/beta hydrolase 83 343 IPR029058 -
Mibi07g1861 510 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 89 487 IPR001563 GO:0004185|GO:0006508
Mibi07g1861 510 ProSitePatterns Serine carboxypeptidases, histidine active site. 471 488 IPR033124 GO:0004185
Mibi07g1861 510 SUPERFAMILY alpha/beta-Hydrolases 93 504 IPR029058 -
Mibi07g1861 510 FunFam Carboxypeptidase 406 501 - -
Mibi07g1861 510 Pfam Serine carboxypeptidase 96 501 IPR001563 GO:0004185|GO:0006508
Mibi07g1861 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 182 192 IPR001563 GO:0004185|GO:0006508
Mibi07g1861 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 471 484 IPR001563 GO:0004185|GO:0006508
Mibi07g1861 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 181 IPR001563 GO:0004185|GO:0006508
Mibi07g1861 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 218 243 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1861 Mibi-ChrMibi07 39099863 39108072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1861 368 504 Calmodulin-binding Proteins AT2G22960 31.387 2.93e-16 75.1