Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1857 ATGGCGTGCATAAAAGGGGTGAATCGATCGGCGTCGGTGGCTTTGGCCCCGGACGCGCCGTACATGGCGGCAGGAACAATGGCTGGGGCAGTTGATCTGTCATTTAGCTCATCCGCTAATCTTGAAATTTTCGACCTTGATTTTCAGTCTGATGATCAGGAGCTTCCTTTGGTTGCCGAGTGCACGAGCTCTGAAAGGTTCAATCGTTTGTCTTGGGGAAAGAGTGTTTCTGGTTCTGATGGTTTCTCCCTTGGGCTTATTGCTGGTGGGCTTGTTGATGGCAATATTGGCCTCTGGAATCCCCTCACTTTGATCCGTTCGGAGGCAAAAGAAAGTGCTTTTCTTCAACATCTTGTCAGGCATAAAGGGCCAGTCCGTGGTCTCGAGTTTAATACCATTGCTCCAAATCTTCTTGCATCTGGGGCTGAGGATGGTGAAATTTGCATATGGGATTTGGCCAATCCTTCAGATCCATCTCATTTTCCGCCTCTCAGGGGTAGTGGTTCTGCTTCCCAGGGTGAAATTTCGTTCGTATCTTGGAATAGCAAAGTCCAGCACATAGTAGCATCAACTTCGTATAATGGGACTACTGTGATCTGGGACCTAAGGAAGCAAAAGCCAGTGATAAGCTTTGCAGACTCATTTAGAAGGCGATGTTCAGTTTTGCAATGGAATCCTGATTTTGCCACTGAGCTAGTTGTTGCATCAGATGAAGATGGTTCTCCTGCTGTGAGGCTTTGGGATATGAGGAATATAATGGCACCAATTAAAGAGTTTGTGGGGCATAGTAGAGGTGTAATTGCCATGTCATGGTGTCCCTATGATAGCCATTATTTGCTTACGTGTGCCAAAGATAGTCGAACTCTATGCTGGGACACAACTTCTGGAGAGATTTTGCGGGAATTGCCTGCTGGGACCAACTGGAATTTTGATGTGCATTGGTATCCTAAAATACCTGCAGTAATTTCAGCATCTTCCTTTGATGGGAAAATTGGCATCTACAATGTTGAGGGTTGCAGTCGGTATGGTGCTGGGCACAATGATTTTGGTTCAGTATCTCTAAGAGCTCCAAAATGGTTTAAACGCCCAGTTGGAGTGTCTTTTGGCTTTGGTGGCAAGCTTGTATCATTTAACACCAAGTCATCTGCCACAAATGCCCCTGCTGAGGCTTCAGAGGTTTATGTGCATAATATGGTTACCGAACATGGTCTAGTGAGTCGTTCCTCTGAATTTGAAGCCGCAATACATAACGGGGAAAGACCTTTGCTGAGGGTTTTATGTGACAAAAAGTCTCAGGAGTCAGAAGCTGATGAAGAAAGAGAAACATGGGGCTTCTTAAAGGTTATGTTTGAAGATGATGGGACAGCACGAACGAAGCTGCTTTCACATCTTGGTTTTGCTGTACCTATTGAAGAAAAAGACACAGCTGTAGATGATCTTGCACAAGAAGTCAGTGCTATTGGACTTGATGAGATGACTGTTGATAAAGTAGGACTTGGGCCTATAAATGAATCTACTGTTTTCCCAGACACTGGGGAGGATTTCTTTAACAATCTTCCTAGTCCCAAAGCTGATACACCTGTATCTACTTCTGGTGGTAATATGGATTATGCCAATGGTGTGGACAAACCCGAAGAAGAGTTGGAAGTAGAGGAGAGCAATGATCCTACGTTTGATGACAATGTTCAGAGAGCATTAGTTGTTGGGGACTACAAAGGGGCAGTTACACAATGCATATCTGCAAATAAGTGGGCTGATGCTCTAGTTATTGCTCATGTAGGCAGTGCTTCACTGTGGGAAGGTACACGAGACCAATATCTTAAGAGATTCAGATCTCCGTACTTGAAGATTGTCTCTGCGATGGTGAGCAAGGATCTCTTAAGCCTTGTGAACACCAGGCCTCTAAAATTTTGGAAAGAGACTCTTGCTCTTCTTTGTAGTTTTGCTCAGAGAGATGAATGGACAATGCTTTGTGATACACTTGCTTCAAAACTCAAGGAAGCTGGAAATACATTAGCTGCAACTCTCTGTTATATATGTGCTGGCAATATTGATATGACAGTTGAAATTTGGTCACAGAATTTGCAGAGTGAGCATGAAGGAAAATCGTATGTTGATGTTCTCCAGGATTTGATGGAAAAAACTATTGTTCTTGCCTTAGCGACTGGGCAGAAGCAATTTAGTGCATCTCTTTGCAAGCTTGTCAAGAAATATGCTGAAATTTTAGCAAGTCAAGGACTGTTGACTACAGCATTGGAGTATATGAAGCTTTTGGGTTCTGCTGAACTGTCACCTGAACTTCTAATCTTAAAAGATCGGATTTCTCTTTCTACACAACCTGAGAAAGATGTCCAGACTACTGAGCATGAAAATACTCAGCCACAAGGTGGATCATTTTACAATGATAATCCCAGTTATAGTAGAAGTTATTATCAGGAGTCAGTTTCACCACAAGTGCAGCATGGTGCTTCTGGATTTCCTTATAATGAACACTATCAACAACCCTTTGATCCTTCATATGGAAGAAGGTATGCTGGATCTGCTCCGTTGCAGCAACCTCAACAACCTAATTTGTTTGTTCCTTCACAGGCATCTCAGGTTCACCAAGCACCTCAGCAAAACTTATCTACTGCTCCTGTCACACAACCTCCTATGAGATCTTTTGTTCCTCACACTCCTCCAGCACTAAGAAATGTCGAGCAATATCAGCAGCCAACATTGGGTTCTCAGCTGTATCCTGCAGCCTCGAATCCACCTTACCAACCTACACCCCCTGCCACATCTCAAATGGGTTTGGTTCATGGCCAGAAGCTGCCACAGGCGGTGGTGCCGACACCAAATCCAATGGGATTTGCCCCGGTACCTAGTTCTGGTGTTGCACAAAGACCTGTGATTGGATCAATTCAGCCTCCCAGTCCCCCTCAGGCGGCTCCTGCACAGCCACCTCCAGCACCAGCTGCTCCACCTCCAACTGTGCAAACAGCTGATACTTCAAATGTGCCTGTGCACCAAAAGCCCATTGTCACAACGTTGACTAGGCTTTTCAACGAGACATCAGAAGTGCTGGGAGGTTCACGTGCGAATCCAGCTAGAAAGCGGGAGATAGAAGACAACTCAAAGAAAATCGGAGGATTATTTGTGAAATTGAACAGTGGGGACATCTCTAAAAATGCCGCGGATAAGCTCCTCAAGCTGTGTCAGGCATTAGACAAAGGCGATTTCAGTACAGCCCTACAAATTCAGGTACTACTTACTACAACTGAATGGGATGAATGCCAGTCCTGGCTTGGTTCACTGAAGCGAATGATCAAGACAAGGCAGAGTGTGAGATAA 3333 0.4473 MACIKGVNRSASVALAPDAPYMAAGTMAGAVDLSFSSSANLEIFDLDFQSDDQELPLVAECTSSERFNRLSWGKSVSGSDGFSLGLIAGGLVDGNIGLWNPLTLIRSEAKESAFLQHLVRHKGPVRGLEFNTIAPNLLASGAEDGEICIWDLANPSDPSHFPPLRGSGSASQGEISFVSWNSKVQHIVASTSYNGTTVIWDLRKQKPVISFADSFRRRCSVLQWNPDFATELVVASDEDGSPAVRLWDMRNIMAPIKEFVGHSRGVIAMSWCPYDSHYLLTCAKDSRTLCWDTTSGEILRELPAGTNWNFDVHWYPKIPAVISASSFDGKIGIYNVEGCSRYGAGHNDFGSVSLRAPKWFKRPVGVSFGFGGKLVSFNTKSSATNAPAEASEVYVHNMVTEHGLVSRSSEFEAAIHNGERPLLRVLCDKKSQESEADEERETWGFLKVMFEDDGTARTKLLSHLGFAVPIEEKDTAVDDLAQEVSAIGLDEMTVDKVGLGPINESTVFPDTGEDFFNNLPSPKADTPVSTSGGNMDYANGVDKPEEELEVEESNDPTFDDNVQRALVVGDYKGAVTQCISANKWADALVIAHVGSASLWEGTRDQYLKRFRSPYLKIVSAMVSKDLLSLVNTRPLKFWKETLALLCSFAQRDEWTMLCDTLASKLKEAGNTLAATLCYICAGNIDMTVEIWSQNLQSEHEGKSYVDVLQDLMEKTIVLALATGQKQFSASLCKLVKKYAEILASQGLLTTALEYMKLLGSAELSPELLILKDRISLSTQPEKDVQTTEHENTQPQGGSFYNDNPSYSRSYYQESVSPQVQHGASGFPYNEHYQQPFDPSYGRRYAGSAPLQQPQQPNLFVPSQASQVHQAPQQNLSTAPVTQPPMRSFVPHTPPALRNVEQYQQPTLGSQLYPAASNPPYQPTPPATSQMGLVHGQKLPQAVVPTPNPMGFAPVPSSGVAQRPVIGSIQPPSPPQAAPAQPPPAPAAPPPTVQTADTSNVPVHQKPIVTTLTRLFNETSEVLGGSRANPARKREIEDNSKKIGGLFVKLNSGDISKNAADKLLKLCQALDKGDFSTALQIQVLLTTTEWDECQSWLGSLKRMIKTRQSVR 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1857 1110 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 118 152 - -
Mibi07g1857 1110 Pfam Sec23-binding domain of Sec16 562 760 IPR024298 -
Mibi07g1857 1110 MobiDBLite consensus disorder prediction 909 930 - -
Mibi07g1857 1110 Gene3D - 352 778 - -
Mibi07g1857 1110 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 301 IPR001680 GO:0005515
Mibi07g1857 1110 MobiDBLite consensus disorder prediction 967 990 - -
Mibi07g1857 1110 FunFam Protein transport protein SEC31 homolog B 1 337 - -
Mibi07g1857 1110 MobiDBLite consensus disorder prediction 945 1004 - -
Mibi07g1857 1110 MobiDBLite consensus disorder prediction 779 804 - -
Mibi07g1857 1110 ProSiteProfiles Trp-Asp (WD) repeats profile. 118 152 IPR001680 GO:0005515
Mibi07g1857 1110 PANTHER SEC31-RELATED PROTEIN 3 1107 IPR040251 GO:0006888
Mibi07g1857 1110 Gene3D Functional domain of the splicing factor Prp18 996 1110 - -
Mibi07g1857 1110 SMART WD40_4 204 248 IPR001680 GO:0005515
Mibi07g1857 1110 SMART WD40_4 252 292 IPR001680 GO:0005515
Mibi07g1857 1110 SMART WD40_4 111 151 IPR001680 GO:0005515
Mibi07g1857 1110 SMART WD40_4 295 335 IPR001680 GO:0005515
Mibi07g1857 1110 SMART WD40_4 161 201 IPR001680 GO:0005515
Mibi07g1857 1110 MobiDBLite consensus disorder prediction 820 892 - -
Mibi07g1857 1110 MobiDBLite consensus disorder prediction 848 883 - -
Mibi07g1857 1110 FunFam Protein transport protein SEC31 homolog B 996 1110 - -
Mibi07g1857 1110 FunFam Protein transport protein SEC31 homolog B 353 778 - -
Mibi07g1857 1110 MobiDBLite consensus disorder prediction 789 804 - -
Mibi07g1857 1110 SUPERFAMILY WD40 repeat-like 12 337 IPR036322 GO:0005515
Mibi07g1857 1110 ProSitePatterns Trp-Asp (WD) repeats signature. 138 152 IPR019775 -
Mibi07g1857 1110 Gene3D - 1 337 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1857 Mibi-ChrMibi07 39031047 39046254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1857 110 345 Miscellaneous Gene Families AT5G08390 25.630 1.50e-13 73.6