Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1839 ATGAAGTCCCACATTTCAAAATCCAAACTTTCTCCTCCATTATTACTCTCTGAAGCATCAAGCTCTACTAGCAGCGAAACCGAAGAAACCAACCTCTTTTCTCTGCAATATCAACCATTGGCCATTCTTTCTGGACACATTTCCTCTGTTTCTTGTTTATCCCTTTGTGGAGACTTCATTCTCAGTGCTTCTCAAAGCAAGGATATCATTGTTTGGCAAAACCAAGATTTCAAGCTTCTCAACAAGTTCGGACATGGCGATGGATCGGTTAAATCCCTCGTCACAGCCGGAAACAAGATCTTCTCGGCTCATCAAGATGGAAAAATCAGAGTGTGGAAGGTTTCTAGGAGCTCAGAGAATAATAATGTGTTCAAGCTTGTGGAAACTCTGCCAACAACTAAGGATTATTTGGGGAAATTCATGAAACATAGTAATTATGTCCAAACAAGAAGACACCACAAGAAATTGTGGATTGAACATTCAGATAGCATCTCATGCTTGACAGTATCTAATGGTTTCATCTATTCTGGTTCATGGGACAAGACTCTAAAGGTATGGAAATTATCAAATTTCAAGTGTTTAGAATCCATTAAAGCTCATGATGATGCCATTAATGGCTTAGTGGCATGTAAAGGGGTTGTGTATTCTTCTTCTGCAGATGGAAAAATCAAAGCTTGGGGAAGAAAAGAGGGCAAGAACAAGAAGAAGAACAAGAAGATCTCACATTGTTTAAAAGGGGTTTTGAAGGGTGTTCATAAAGATTCATCCTTTAATTGTGTGCTTGTTTCTCAAGATGGGAAATGGGTATATGGAGGAGATTCTAACGGTTTTATAATAGAATGGGAGAAAATTGAGGGGTTGGCCACTCAAACCAACTCTGATATGATAAACCAATGTCTTGACCAGTTCAATGAGTCATGGAAGCTTGTAAGTGTGACAAGAGCTCATGAAATGGCTGTTTTGTGCATGTGTTTAAGGGGGGAGATTTTGTTTAATGGATCTTCAGATAAAAGTATAAGAATTTGGAAAAGAGATGGATTAAATGGTAGGCTTTGTAAAATTGGGGTAATAAGTGGACATGAAGGGCCAGTGAAGTGTTTGGAGGCATCTTGGATAAGTATTACTGATGGTGGATTTTTGCTTTATAGTGGAAGTATGGACAAAAGCTTGAGAGTTTGGTGGGTTTCAATGAACAATGAGGAAGATACACAAGAAAATTCTAGTGCTATTGCATCAAGAACAGTGAATTAA 1251 0.3837 MKSHISKSKLSPPLLLSEASSSTSSETEETNLFSLQYQPLAILSGHISSVSCLSLCGDFILSASQSKDIIVWQNQDFKLLNKFGHGDGSVKSLVTAGNKIFSAHQDGKIRVWKVSRSSENNNVFKLVETLPTTKDYLGKFMKHSNYVQTRRHHKKLWIEHSDSISCLTVSNGFIYSGSWDKTLKVWKLSNFKCLESIKAHDDAINGLVACKGVVYSSSADGKIKAWGRKEGKNKKKNKKISHCLKGVLKGVHKDSSFNCVLVSQDGKWVYGGDSNGFIIEWEKIEGLATQTNSDMINQCLDQFNESWKLVSVTRAHEMAVLCMCLRGEILFNGSSDKSIRIWKRDGLNGRLCKIGVISGHEGPVKCLEASWISITDGGFLLYSGSMDKSLRVWWVSMNNEEDTQENSSAIASRTVN 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1839 416 FunFam BnaA09g28200D protein 147 231 - -
Mibi07g1839 416 Gene3D - 133 210 IPR015943 GO:0005515
Mibi07g1839 416 ProSiteProfiles Trp-Asp (WD) repeats profile. 313 343 IPR001680 GO:0005515
Mibi07g1839 416 Pfam WD domain, G-beta repeat 159 187 IPR001680 GO:0005515
Mibi07g1839 416 Pfam WD domain, G-beta repeat 38 72 IPR001680 GO:0005515
Mibi07g1839 416 Pfam WD domain, G-beta repeat 80 113 IPR001680 GO:0005515
Mibi07g1839 416 Pfam WD domain, G-beta repeat 354 393 IPR001680 GO:0005515
Mibi07g1839 416 Gene3D - 10 123 IPR015943 GO:0005515
Mibi07g1839 416 SMART WD40_4 36 73 IPR001680 GO:0005515
Mibi07g1839 416 SMART WD40_4 306 343 IPR001680 GO:0005515
Mibi07g1839 416 SMART WD40_4 350 394 IPR001680 GO:0005515
Mibi07g1839 416 SMART WD40_4 190 227 IPR001680 GO:0005515
Mibi07g1839 416 SMART WD40_4 76 113 IPR001680 GO:0005515
Mibi07g1839 416 SMART WD40_4 149 187 IPR001680 GO:0005515
Mibi07g1839 416 SMART WD40_4 241 282 IPR001680 GO:0005515
Mibi07g1839 416 Gene3D - 213 415 IPR015943 GO:0005515
Mibi07g1839 416 ProSiteProfiles Trp-Asp (WD) repeats profile. 157 196 IPR001680 GO:0005515
Mibi07g1839 416 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 6 398 IPR045182 -
Mibi07g1839 416 PRINTS G protein beta WD-40 repeat signature 330 344 IPR020472 -
Mibi07g1839 416 PRINTS G protein beta WD-40 repeat signature 174 188 IPR020472 -
Mibi07g1839 416 PRINTS G protein beta WD-40 repeat signature 100 114 IPR020472 -
Mibi07g1839 416 SUPERFAMILY WD40 repeat-like 40 398 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1839 Mibi-ChrMibi07 38740855 38742105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1839 188 396 Acyl Lipid Metabolism Gene Families AT3G18860 25.000 1.24e-07 52.0