Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1830 ATGGCTTTGGATCAGTCCAAAGAGAACCACCAAAAGGTGGAAGATGAAGACTCTTATGGTCTTTCTGCCATGCATATGTGTTGTAGTCAGATCTATTCTGCAGTTTTAAACGCAGCTCTTGAGCTCAACTTGTTTGAGATTATAGCTAATGAAGGAGGAAGACACGTCTCGGCCTCCGAGGTTGCTTCAAAGCTTCCAAGTTCATCTCAACACAAAGACTTGGCTTTCAGGATAGATCGTCTCTTGAGGCTTCTTGCTTGTCACTCGCTTTTGAATTGTTCAGTTCGTGAGAAGGAATATGGTGGCTCTGAGAGACTCTATGCAATTTCTCCTGTTGGAAAGTACTTTGTTGGTGGGAACGATAATGGTGGATTCTTGGCTCTCTTCTCATCATTCATTTGTCATAAGGCACTCGTGGATGCTTGGCTGAATTTTAAGGATGTAATCATAGACGAGGACAATGACTTGTTCAAGAAAATTCATGGGATGCCAATGTACCAATACGCAGAGATAGATCCAAAGTGGAACACTATTTTCAATAAAGCAATGGCCAACATTTGTAATATTGAGATGAATAGAATATTGGAAATATACAAAGGATTTGAGGGAATATCAACACTTGTTGATGTTGGTGGTGGTACTGGCCAAAACCTCAAAATTATCATCTCCAAATATCCATCAATTAAGGCTATTAATTTTGATTTGCCTCAAGTCATTCAAAATGCTCAACCTCATGCAGGGATTGAACATGTTGGAGGAGATATGTTTGAAAGTGTTCCAAAAGGCGATGCCATAATGCTAAAGGCCGTATGTCACAACTGGTCTGATGAAAATAGCATTAAAATATTGAGAAAATGCCACGAAGCAATACCAGAAAATGGAAAGGTGATAGTGATTGAGTTCATAATGCCTGAAGTAATTGGGCCGACAGAAGAAGCCAAGTTTGTTGCAAGCATGGATAATCTCATGTTTCTTCATGATGGAAGAGAAAGAACCAAGAAAGAATTTGAATCTCTTTGCAAACGTTCTGGATTTTCAAGTTTCAACGTTGCTTGTCGTGCCTTCTCTACACTTGGAGTTATGGAATTCTACAAATAA 1098 0.3934 MALDQSKENHQKVEDEDSYGLSAMHMCCSQIYSAVLNAALELNLFEIIANEGGRHVSASEVASKLPSSSQHKDLAFRIDRLLRLLACHSLLNCSVREKEYGGSERLYAISPVGKYFVGGNDNGGFLALFSSFICHKALVDAWLNFKDVIIDEDNDLFKKIHGMPMYQYAEIDPKWNTIFNKAMANICNIEMNRILEIYKGFEGISTLVDVGGGTGQNLKIIISKYPSIKAINFDLPQVIQNAQPHAGIEHVGGDMFESVPKGDAIMLKAVCHNWSDENSIKILRKCHEAIPENGKVIVIEFIMPEVIGPTEEAKFVASMDNLMFLHDGRERTKKEFESLCKRSGFSSFNVACRAFSTLGVMEFYK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1830 365 SUPERFAMILY "Winged helix" DNA-binding domain 17 121 IPR036390 -
Mibi07g1830 365 Pfam O-methyltransferase domain 142 346 IPR001077 GO:0008171
Mibi07g1830 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 363 IPR029063 -
Mibi07g1830 365 CDD AdoMet_MTases 206 303 - -
Mibi07g1830 365 Gene3D Vaccinia Virus protein VP39 176 354 IPR029063 -
Mibi07g1830 365 PIRSF O-mtase 1 365 IPR016461 GO:0008168
Mibi07g1830 365 FunFam Caffeic acid 3-O-methyltransferase 2 116 - -
Mibi07g1830 365 PANTHER O-METHYLTRANSFERASE 28 355 IPR016461 GO:0008168
Mibi07g1830 365 Gene3D - 31 194 IPR036388 -
Mibi07g1830 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 365 IPR016461 GO:0008168
Mibi07g1830 365 FunFam Caffeic acid O-methyltransferase 120 365 - -
Mibi07g1830 365 Pfam Dimerisation domain 35 86 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1830 Mibi-ChrMibi07 38274786 38278005 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1830 16 355 Monolignol Biosynthesis Gene Families AT5G54160 46.784 1.07e-107 318