Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1763 ATGAAAGTCCCTTGCTGTTCGGTTTGCCAAACGCGGTACAACGAGGAAGAGCGAGTCCCACTTCTGCTCCAATGTGGTCATGGCTTTTGCAGAGAGTGTCTCTCTAGAATGTTCTCGGCGTCTCCAGATACGACCCTAGCGTGCCCCAGGTGCCGCCACGTGTCCACAGTAGGGAACTCCGTACAGGCCCTGCGCAAGAACTACGCCGTCTTGGCTCTAATCCACTCGGCTTCGAACGCCTCCGGTTCGAATTTCGATTGCGACTTCACAGACGATGAGGAAGAAGAAGGTGGTGAAGGTGTTGGTGAAGAATATATAGACAATGATGAACAAGACTCGGTAATCCGCCGCCGCCGGTGTAGCCGCGGCTCGCAGACGTCGAGCTCCGGCGGCTGCGGGCCGGTGATAGAGGTCGGAGCGCATCAAGAGTTGAAATTTCTGCGCCGGCTTGGGGAGGGGAGGAGGGCTGGTGTGGAAATGTGGACGGCGGTGATTGGCGGTGCCGGTGGAGGTGGAGGCTGCGGCGGCGGGAACGGGCGGTGCCGGCATCAGGTGGCGGTGAAGAAGGTTGTGATAATGGAGGAGATGGATTTGGATTGGATGCAGGGGCAGCTTGAGAATCTGCGTCGTGCTTCAATGTGGTGTAGGAATGTGTGTACATTTCATGGGGCGATGAGAATGGAGGAAAGTTTGTGTCTTGTGATGGACAGGTGTTATGGATCAGTTCAGTCAGAGATGCAGCGAAATGAAGGAAGGCTTACATTGGATCAAGTCTTAAGATATGGGGCAGATATTGCTAGAGGTGTGGCTGAGCTTCATGCTGCCGGTATTGTTTGCATGAATCTCAAACCATCCAATCTTCTTCTTGATGCAAATGGTCGAGCAGTGATTTCAGATTATGGACTTGCTACAATTTTGAAGAAGCCTTCCTGTCGGAAGGCCCGTCTAGAATGTGAAAACTCCTCAAAGATCCATTCATGCATGGAGTGTATAATGCTCAGCCCACATTATACGGCTCCAGAGGCTTGGGAACCTGTGAAGAAGTTAAATTTGTTCTGGGATGATGCAATAGGTATATCTGCAGAGTCGGATGCCTGGAGTTTTGGTTGTACATTGGTGGAAATGTGCACGGGTTCTGTTCCCTGGTCTGGTTTAAGTGCGGAAGAAATCTATCGAGCAGTTGTCAAGGGAAAGAAACTGCCTCCGCAGTATGCTAGTGTGGTTGGCGGTGGAATACCGAGGGAATTGTGGAAGATGATTGGAGAGTGCTTACAGTTTAAACCAGCCAAAAGGCCTAGTTTTAATGCAATGTTAGCAATATTTCTTCGTCATTTGCAGGAAATACCACGCAGCCCTCCTGCAAGCCCTGATAATGAATTTGTTCAATCATCTGTGTCAAATTCGGTGGAGCTTTCCCCACTACCTGAGCCAGAAGTTCCACGAGAAAACCCAAACCATCTTCATCGACTTGTGTCTGAAGGGGATGTTAGAGGCGTTAGAGATCTTCTTGCAAAGGCGGCATCAGAAAATGGTAGCAGCTACGTATCTTCTTTATTGGAAGCTCAAAATGCTGATGGACAAACTGCTCTTCATCTGGCTTGTAGACGGGGTAGTGCAGACCTTGTTGAAGCTATTTTGGAGTACAGAGAGGCAAATGTAGATGTCTTGGACAAAGATGGAGATCCTCCTCTAGTTTTTGCTTTAGCGGCTGGATCTCCAGATTGTGTCCATAGTCTTATAAAAAGAAATGCTAATGTAAGGTCTCGGTTGAGAGATGGCTTTGGCCCTTCTGTTGCCCATGTTTGTGCTTATCATGGACAGCCAGATTGCATGCGGGAATTACTGTTGGCTGGAGCGGATCCTAATGCAGTGGATGATGAAGGAGAAACTGTACTGCATAGGGCAGTTGCCAAGAAGTACACTGACTGTGCTCTTGTGATATTGGAAAATGGAGGCTGCAGATCAATGGGCATCTTAAATTCAAAGAATCTGACACCACTGCACTTGTCTGTGGCAACATGGAATGTGGCTGTTGTTAAAAGATGGGTGGAAGTTGCAACTCCTGATGAGATTGCTGAGGCAATTGACATTCCAAATCCTATTGGCACTGCACTGTGCATGGCAGCTGCTTCCAAAAAAGACCATGAAACTGAGGGAAGAGAAATGGTGAAGGTATTGCTTGCTGCAGGAGCAGATCCATCTGCTCAAGATACACAGAATGGGCGGACAGCTCTGCATACAGCAGCTATGACTAATGACGATGAGTTGGTCAAGGTTATTCTTGCTGCTGGTGTTGATGTGAACATCCGTAATGTGCACAACAGTATACCTCTTCACTTAGCTCTAGCTAGGGGGGCAAAGTCATGTGTTGGATTGCTTCTATCTGCCGGGGCTGATTATAATTTGCAGGATGATGATGGTGACAATTCTTTCCACATAGCAGCAGAGACAGCAAAAATGATTCGTGAAAATCTTGATTGGCTCATTGTGATGCTGAAAAAACCTAATGCTGATGTTGAAGTGAGAAACCACAGTGGCAAGACACTACGTGATATCTTAGAGGCCCTTCCTCGAGAATGGATATCTGAAGATCTGATGGAGGCACTTACCAATAGAGGTGTTCATCTATCTTCCACGATATTTGAAGTGGGAGATTGGGTGAAATTCAAAAGAACTGTCACAACTCCAACATATGGGTGGCGGGGTGCTAAACAGAAGAGTGTTGGCTTTGTGCAAAGTGTTCCTGATAGGGAGAATCTCATTGTGTCCTTTTGTTCTGGAGAGGCTCGTGTTTTGGCAAGTGAAGTTGTAAAAGTCATTCCATTAGACAGAGGCCAACATGTACAGCTCAAAGAAGATGTGAAAGAGCCCAGGTTTGGATGGCGTGGACAGTCACGTGACAGCGTTGGGACAGTTTTATGCGTTGATGATGATGGCATCCTCCGTGTAGGATTTCCTGGAGCATCTAGAGGATGGAAAGCTGACCCATCCGAGATGGAACGGGTTGAGGAGTACAAGGTTGGAGACTGGGTTCGTATTCGCCCCACTCTTACATCTGCAAAGCACGGATTAGGGTCTGTGACACCGGGAAGCATTGGCATAGTATATTGTATCAGACCAGACAGTAGTCTCTTAATTGAACTGAGCTATCTTCCAAATCCTTGGCATTGTGAACCAGAAGAGGTTGAGCACGTTGCTCCTTTCAGGATTGGTGATCGGGTTTGTGTGAAGCGATCTGTTGCAGAACCTCGATATGCTTGGGGTGGCGAGACACATCATAGTGTCGGAAGAATAAGTGAGATAGAAAATGATGGTTTATTAATAATTGATATACCAAATCGACCCATACCTTGGCAGGCTGATCCATCTGACATGGAGAAGGTGGAAGATTTCCAGGTGGGAGATTGGGTCAGAGTGAAAGCTTCAGTGTCGTCTCCAAAGTATGGATGGGAGGACATTACAAAGAGCAGCATCGGAATAATTCACAGCTTGGAGGAGGATGGGGATATGGATATTGCCTTTTGCTTCAGGAGTAAGCCTTTCCGTTGCTCCGTCACTGATGTGGAGAAGGTTCCTCCTTTTGAGGTGGGGGAAGAGATTCATGTGATGCCATCTGTTACTCAGCCTCGGCTTGGATGGTCAAATGAATCACCAGCTTCTGTTGGAAAAATCGTGAGAATTGACATGGATGGTGCTCTAAATGTGAGAGTCACTGGCAGGCAGAGCTTGTGGAAAGTTTCTCCTGGAGATGCAGAACGACTTCCTGGACTTGAAGTTGGTGATTGGGTTCGCTCAAAACCAAGCCTTGGAAATAGACCAAGTTATGACTGGAATAGTGTTGGAAAAGAAAGTATAGCTGTTGTGCATAGTGTACAGGATTCTGGATACTTGGAGTTGGCTTGCTGTTTTCGTAAAGGAAAGTGGATCACTCATTATACAGACGTTGAAAAGGTTCCTTCCTTTAAAGTTGGGCAGTATGTTAGGTTCAGAACTGGTTTGGCCGAACCAAGATGGGGCTGGAGAGGAGCTCAACCTAAATCACGCGGTGTTATTACCAGTATACATGCTGATGGAGAAGTGAGAGTGGCATTCTCTGGTTTGCCTGGTTTGTGGAGAGGAGATCCCGTGGACCTTGAGATTGAGCACATGTTTGAAGTTGGAGAGTGGGTGAAGTTAAAAGATAATGCCGATGACTGGAAATCTGTTGGTCCGGGTAGTGTTGGTGTTGTACAAGGAATTGGGTATGAAGGTGATGTATGGGATGGAAACATTCATGTTGGCTTCTGTGGGGAACAAGAAAGGTGGGTAGGGCCAACTTCCCATCTTGAAAGAGTTAAGAAACTCATTGTTGGGCAGAGGGTTAGAGTTAAACAGGCTGTAAGACAGCCAAGATTTGGGTGGTCTGGACACACCCATGCTAGTATCGGAACCATATCAGCTATCGATGCCGATGGAAAGCTTCGAATATACACTCCAGCAGGATCAAAAGCATGGATGCTGGACCCGTCAGAAGTAGATTTGGTAGAAGAGGAGGAGCTCCGGATCGGAGACTGGGTTAAGGTCAGAGCATCTGTTTCTACCCCTACACACCAGTGGGGTGAAGTAAACCATTCAAGCATCGGAGTTGTGCATCGCATGGAAGATGATGATCTGTGGGTGGCATTCTGTTTCACTGAGAGGCTATGGCTTTGCAAGGCATGGGAAATGGAAAGAGTTAGAGCATTTAAAGTTGGGGATAAAGTAAGGATTCGAGATGGATTGGTGTCGCCCCGGTGGGGCTGGGGAATGGAGACACATGCTAGCAAGGGACAGGTGACTGGAGTAGATTCAAATGGTAAGCTAAGAATTAAGTTCCGATGGCGGGAAGGTAGGCCCTGGATAGGAGACCCCGCCGATATCGTTCTCGACGAGAACTGA 4917 0.4753 MKVPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFSASPDTTLACPRCRHVSTVGNSVQALRKNYAVLALIHSASNASGSNFDCDFTDDEEEEGGEGVGEEYIDNDEQDSVIRRRRCSRGSQTSSSGGCGPVIEVGAHQELKFLRRLGEGRRAGVEMWTAVIGGAGGGGGCGGGNGRCRHQVAVKKVVIMEEMDLDWMQGQLENLRRASMWCRNVCTFHGAMRMEESLCLVMDRCYGSVQSEMQRNEGRLTLDQVLRYGADIARGVAELHAAGIVCMNLKPSNLLLDANGRAVISDYGLATILKKPSCRKARLECENSSKIHSCMECIMLSPHYTAPEAWEPVKKLNLFWDDAIGISAESDAWSFGCTLVEMCTGSVPWSGLSAEEIYRAVVKGKKLPPQYASVVGGGIPRELWKMIGECLQFKPAKRPSFNAMLAIFLRHLQEIPRSPPASPDNEFVQSSVSNSVELSPLPEPEVPRENPNHLHRLVSEGDVRGVRDLLAKAASENGSSYVSSLLEAQNADGQTALHLACRRGSADLVEAILEYREANVDVLDKDGDPPLVFALAAGSPDCVHSLIKRNANVRSRLRDGFGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGETVLHRAVAKKYTDCALVILENGGCRSMGILNSKNLTPLHLSVATWNVAVVKRWVEVATPDEIAEAIDIPNPIGTALCMAAASKKDHETEGREMVKVLLAAGADPSAQDTQNGRTALHTAAMTNDDELVKVILAAGVDVNIRNVHNSIPLHLALARGAKSCVGLLLSAGADYNLQDDDGDNSFHIAAETAKMIRENLDWLIVMLKKPNADVEVRNHSGKTLRDILEALPREWISEDLMEALTNRGVHLSSTIFEVGDWVKFKRTVTTPTYGWRGAKQKSVGFVQSVPDRENLIVSFCSGEARVLASEVVKVIPLDRGQHVQLKEDVKEPRFGWRGQSRDSVGTVLCVDDDGILRVGFPGASRGWKADPSEMERVEEYKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLIIDIPNRPIPWQADPSDMEKVEDFQVGDWVRVKASVSSPKYGWEDITKSSIGIIHSLEEDGDMDIAFCFRSKPFRCSVTDVEKVPPFEVGEEIHVMPSVTQPRLGWSNESPASVGKIVRIDMDGALNVRVTGRQSLWKVSPGDAERLPGLEVGDWVRSKPSLGNRPSYDWNSVGKESIAVVHSVQDSGYLELACCFRKGKWITHYTDVEKVPSFKVGQYVRFRTGLAEPRWGWRGAQPKSRGVITSIHADGEVRVAFSGLPGLWRGDPVDLEIEHMFEVGEWVKLKDNADDWKSVGPGSVGVVQGIGYEGDVWDGNIHVGFCGEQERWVGPTSHLERVKKLIVGQRVRVKQAVRQPRFGWSGHTHASIGTISAIDADGKLRIYTPAGSKAWMLDPSEVDLVEEEELRIGDWVKVRASVSTPTHQWGEVNHSSIGVVHRMEDDDLWVAFCFTERLWLCKAWEMERVRAFKVGDKVRIRDGLVSPRWGWGMETHASKGQVTGVDSNGKLRIKFRWREGRPWIGDPADIVLDEN 1638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1763 1638 ProSiteProfiles Ankyrin repeat region circular profile. 525 547 - -
Mibi07g1763 1638 Pfam Protein kinase domain 181 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1763 1638 ProSiteProfiles Ankyrin repeat profile. 740 772 IPR002110 GO:0005515
Mibi07g1763 1638 CDD RING-HC_ScPSH1_like 5 52 - -
Mibi07g1763 1638 MobiDBLite consensus disorder prediction 456 471 - -
Mibi07g1763 1638 Gene3D - 594 695 IPR036770 -
Mibi07g1763 1638 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Mibi07g1763 1638 FunFam E3 ubiquitin-protein ligase KEG 465 695 - -
Mibi07g1763 1638 Gene3D - 481 593 IPR036770 -
Mibi07g1763 1638 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 84 IPR013083 -
Mibi07g1763 1638 Pfam RING-type zinc-finger 6 49 IPR027370 -
Mibi07g1763 1638 MobiDBLite consensus disorder prediction 452 485 - -
Mibi07g1763 1638 SMART ANK_2a 627 658 IPR002110 GO:0005515
Mibi07g1763 1638 SMART ANK_2a 806 841 IPR002110 GO:0005515
Mibi07g1763 1638 SMART ANK_2a 594 623 IPR002110 GO:0005515
Mibi07g1763 1638 SMART ANK_2a 662 693 IPR002110 GO:0005515
Mibi07g1763 1638 SMART ANK_2a 559 588 IPR002110 GO:0005515
Mibi07g1763 1638 SMART ANK_2a 773 802 IPR002110 GO:0005515
Mibi07g1763 1638 SMART ANK_2a 700 735 IPR002110 GO:0005515
Mibi07g1763 1638 SMART ANK_2a 740 769 IPR002110 GO:0005515
Mibi07g1763 1638 SMART ANK_2a 525 555 IPR002110 GO:0005515
Mibi07g1763 1638 Pfam Mind bomb SH3 repeat domain 1257 1378 IPR040847 -
Mibi07g1763 1638 Pfam Mind bomb SH3 repeat domain 1005 1125 IPR040847 -
Mibi07g1763 1638 Pfam Mind bomb SH3 repeat domain 1384 1505 IPR040847 -
Mibi07g1763 1638 Pfam Mind bomb SH3 repeat domain 1131 1249 IPR040847 -
Mibi07g1763 1638 Pfam Mind bomb SH3 repeat domain 881 999 IPR040847 -
Mibi07g1763 1638 Pfam Mind bomb SH3 repeat domain 1568 1632 IPR040847 -
Mibi07g1763 1638 ProSiteProfiles Ankyrin repeat profile. 594 626 IPR002110 GO:0005515
Mibi07g1763 1638 Pfam Ankyrin repeats (many copies) 597 644 IPR002110 GO:0005515
Mibi07g1763 1638 ProSiteProfiles Protein kinase domain profile. 144 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1763 1638 SMART ring_2 6 51 IPR001841 -
Mibi07g1763 1638 FunFam E3 ubiquitin-protein ligase KEG 739 872 - -
Mibi07g1763 1638 SUPERFAMILY RING/U-box 5 58 - -
Mibi07g1763 1638 PRINTS Ankyrin repeat signature 722 736 IPR002110 GO:0005515
Mibi07g1763 1638 PRINTS Ankyrin repeat signature 526 541 IPR002110 GO:0005515
Mibi07g1763 1638 Gene3D - 696 781 IPR036770 -
Mibi07g1763 1638 ProSiteProfiles Ankyrin repeat region circular profile. 773 805 - -
Mibi07g1763 1638 Pfam Ankyrin repeats (3 copies) 505 587 IPR002110 GO:0005515
Mibi07g1763 1638 Pfam Ankyrin repeats (3 copies) 718 804 IPR002110 GO:0005515
Mibi07g1763 1638 Gene3D - 782 859 IPR036770 -
Mibi07g1763 1638 Gene3D Transferase(Phosphotransferase) domain 1 165 461 - -
Mibi07g1763 1638 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Mibi07g1763 1638 ProSiteProfiles Ankyrin repeat profile. 525 558 IPR002110 GO:0005515
Mibi07g1763 1638 SUPERFAMILY Ankyrin repeat 509 818 IPR036770 -
Mibi07g1763 1638 ProSiteProfiles Ankyrin repeat profile. 773 805 IPR002110 GO:0005515
Mibi07g1763 1638 ProSiteProfiles Ankyrin repeat region circular profile. 740 771 - -
Mibi07g1763 1638 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 1637 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Mibi07g1763 1638 SUPERFAMILY Protein kinase-like (PK-like) 142 480 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1763 Mibi-ChrMibi07 36421605 36433257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1763 217 485 MAP Kinase Kinase Kinase AT5G66850 27.306 6.17e-18 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Mibi07g1763 Pkinase 6.5e-30 CL0016