Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1761 ATGGATGAAATCGGAGAATCCGGAGAAAGGCCTATTTTTAGAGATATTAGACGCTATTACTGTGAGTACTGTGGCATCTGTCGATCCAAAAAGACCCTGATAACCTCTCATATCAATTCTTGCCACAAGGAGGAGTTGGAAAGAGACAAAGTGGATAAAGATCAGGAATCTGGGGGCACAAAATCCAACACTTGCAAGGAGTGTGGTGCTAGTTTCAAAAAACCAGCCTATTTGGTGCAGCATATGCTCGGCCATTCTCTTGAGGAAAGATATTTATGCTATCAGAAATTTATGGATACTGGAGACCTCTTGAGAAGCTCCATCAAGGATGCCTCAGTCACGCTGTTTAATGAGCGGCCATATGTGTGTTCTATTGATGACTGTCAAGCAAGTTACCGAAGAAAGGATCACTTGACTCGCCACCTTCTGCATCATAAAGGGAAAACTTTTAAATGTCCAATTGAGGATTGCAACCGTGACTTTGCTTTCCAAGGGAATATGACCAAGCATGTCAGAGAATTTCATAAGAATTCCACACCTGCTAAAGTTGAAACTCAAAAGCAGCATGAATGCCCAGAAATTGGCTGTGGAAAGGTTTTCAGATTTGCTTCAAAGCTACAAAAGCATGAAAATTGTCATGTTAAGCTGGACTCAGTAGATGTAGTCTGCTTGGAACCTGGTTGTATGAAACATTTTACTAATGTCCAGTGCCTTCAAGCCCATATCAAAACATGTCACCAATTTGTAATCTGTGAGACTTGTGGGAAAAAGGAACTGAAGAAGAATATCAAGCGGCACCTCCGGTCGCATGAAGAAACTAGTACTTCATCAGAGGCATTTAAATGTGATCACAAGGATTGTAGCAGCACATTCACTACTAGATCCAATCTTCAGAAGCATGTAAAGGCTGTACACTTGAAAGAAAAGCCATTTGTGTGTCGCTTTCCTGATTGTGGCATGAGATTTTCGTACAAACATGTGAGAGACAATCATGAAAAAACTGGGTTACATGTTTATACACATGGTGATTTTGAAGAATCTGATGGACAATTCAGATCAAAGCCAAGGGGAGGGCGAAAGAGACAGTGTCCTACAGTTGAAATGTTGGTTAGGAAGAGGATCACTCCTCCCAATCAATTGGAACATTGTTTGTTTGGAGAGGATGTAAATAGTGTAATCTGCTAG 1185 0.4101 MDEIGESGERPIFRDIRRYYCEYCGICRSKKTLITSHINSCHKEELERDKVDKDQESGGTKSNTCKECGASFKKPAYLVQHMLGHSLEERYLCYQKFMDTGDLLRSSIKDASVTLFNERPYVCSIDDCQASYRRKDHLTRHLLHHKGKTFKCPIEDCNRDFAFQGNMTKHVREFHKNSTPAKVETQKQHECPEIGCGKVFRFASKLQKHENCHVKLDSVDVVCLEPGCMKHFTNVQCLQAHIKTCHQFVICETCGKKELKKNIKRHLRSHEETSTSSEAFKCDHKDCSSTFTTRSNLQKHVKAVHLKEKPFVCRFPDCGMRFSYKHVRDNHEKTGLHVYTHGDFEESDGQFRSKPRGGRKRQCPTVEMLVRKRITPPNQLEHCLFGEDVNSVIC 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1761 394 Gene3D Classic Zinc Finger 6 90 - -
Mibi07g1761 394 ProSiteProfiles Zinc finger C2H2 type domain profile. 189 218 IPR013087 -
Mibi07g1761 394 ProSitePatterns Zinc finger C2H2 type domain signature. 152 175 IPR013087 -
Mibi07g1761 394 ProSitePatterns Zinc finger C2H2 type domain signature. 223 246 IPR013087 -
Mibi07g1761 394 ProSiteProfiles Zinc finger C2H2 type domain profile. 150 180 IPR013087 -
Mibi07g1761 394 ProSitePatterns Zinc finger C2H2 type domain signature. 191 213 IPR013087 -
Mibi07g1761 394 SUPERFAMILY beta-beta-alpha zinc fingers 264 314 IPR036236 -
Mibi07g1761 394 ProSitePatterns Zinc finger C2H2 type domain signature. 123 145 IPR013087 -
Mibi07g1761 394 Gene3D Classic Zinc Finger 148 176 - -
Mibi07g1761 394 ProSitePatterns Zinc finger C2H2 type domain signature. 313 337 IPR013087 -
Mibi07g1761 394 Gene3D Classic Zinc Finger 115 147 - -
Mibi07g1761 394 ProSiteProfiles Zinc finger C2H2 type domain profile. 121 150 IPR013087 -
Mibi07g1761 394 SUPERFAMILY beta-beta-alpha zinc fingers 59 95 IPR036236 -
Mibi07g1761 394 ProSiteProfiles Zinc finger C2H2 type domain profile. 280 310 IPR013087 -
Mibi07g1761 394 SUPERFAMILY beta-beta-alpha zinc fingers 113 147 IPR036236 -
Mibi07g1761 394 Gene3D Classic Zinc Finger 309 334 - -
Mibi07g1761 394 SMART c2h2final6 280 305 IPR013087 -
Mibi07g1761 394 SMART c2h2final6 311 337 IPR013087 -
Mibi07g1761 394 SMART c2h2final6 121 145 IPR013087 -
Mibi07g1761 394 SMART c2h2final6 189 213 IPR013087 -
Mibi07g1761 394 SMART c2h2final6 221 246 IPR013087 -
Mibi07g1761 394 SMART c2h2final6 150 175 IPR013087 -
Mibi07g1761 394 SMART c2h2final6 63 85 IPR013087 -
Mibi07g1761 394 SMART c2h2final6 19 42 IPR013087 -
Mibi07g1761 394 SMART c2h2final6 249 270 IPR013087 -
Mibi07g1761 394 SUPERFAMILY beta-beta-alpha zinc fingers 148 176 IPR036236 -
Mibi07g1761 394 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
Mibi07g1761 394 PANTHER ZINC FINGER PROTEIN 7 379 - -
Mibi07g1761 394 Gene3D Classic Zinc Finger 252 308 - -
Mibi07g1761 394 Pfam Zinc finger, C2H2 type 150 175 IPR013087 -
Mibi07g1761 394 Pfam Zinc finger, C2H2 type 64 85 IPR013087 -
Mibi07g1761 394 Pfam Zinc finger, C2H2 type 280 305 IPR013087 -
Mibi07g1761 394 Pfam Zinc finger, C2H2 type 121 145 IPR013087 -
Mibi07g1761 394 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 90 IPR013087 -
Mibi07g1761 394 Gene3D Classic Zinc Finger 177 248 - -
Mibi07g1761 394 ProSitePatterns Zinc finger C2H2 type domain signature. 282 305 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1761 118 340 C2H2 Transcription Factor Family AT1G72050 50.725 2.77e-89 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi07g1761 zf-C2H2 0.0012 CL0361