Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1728 ATGAGCTATGCCTCATCTTCTACTCTTTACAGGCAGATGTATCTTAAACTTTGGTATGAGATACATCAAATTCTTTTCTCCTCCATAACGGCACAGTTTCAGCATTCCAAGTTGTCAAAGAAGGAGCTCTACCGCCACTGGAATGATGAAACAGACTTCCCCAATGGGGACTTATGCCAGTACACCCATGGGAATGAAGAACTCGTTCCCACTATACGGGACATGAATTACAAAATGGAACCATGTGAAGCCCATAACACTGGATGCCCGTGCCATTACGATAGTAGATGCCTCTTCCAGCATGATGAGGCGGAGGCCACTGAGATAGAAATGGGTCACATGATTACAAAGTAA 354 0.4435 MSYASSSTLYRQMYLKLWYEIHQILFSSITAQFQHSKLSKKELYRHWNDETDFPNGDLCQYTHGNEELVPTIRDMNYKMEPCEAHNTGCPCHYDSRCLFQHDEAEATEIEMGHMITK 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1728 117 ProSiteProfiles Zinc finger C3H1-type profile. 76 104 IPR000571 GO:0046872
Mibi07g1728 117 PANTHER CCCH ZINC FINGER/TIS11-RELATED 31 106 IPR045877 GO:0003729
Mibi07g1728 117 SUPERFAMILY CCCH zinc finger 75 106 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1728 Mibi-ChrMibi07 35076911 35077368 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1728 38 109 C3H Transcription Factor Family AT1G68200 38.889 2.22e-10 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mibi07g1728 None None None