Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1719 ATGTTAGGCCTGCGAGACCTACTTCTCATAGCTCCAAATCCTTCTTCTCTTCACCCCCACCAACACCACCAACAACATCATCATCATCATCAACAACAGCAACAACAACATCATCAAACCCAAAATGACCATTCTACCCTTCACCCTCTCCCTTCCTCTGCTTCCCTCAGCGTCGGCCTCGGAATCTTCCCTCTCCTCACCACAACTCCCTGCGTCCCCAATGACCTCCCTCACGATTCCACCGATCACAATCACAATCACCAAAACACTGTTTCCAATCCCAATTTCTGGAACCTCAAAATGTGCCCTGAAGTCCCCAATCCCTCCAAGAAAGGAGTGATCCATCATCATGATGATGATGGTGATGGTGATGCTGACGTGGAAGAGAATAATAATAATGGGATTTTCGGGGGTGATTTTAGGGTGTGTCAAGATTGTGGGAATCGAGCTAAGAAAGATTGTTGTTATAGACGATGTAGGACTTGTTGTAAAGGTCGTGGCTATGATTGTAGCACTCATATTAGGAGCACGTGGGTCCCAGCCGCTCGCCGCCGTGAGCGACAGCTCACCGCCCTTTCCGGCGGCGGAGCTGCTTCTGGTTCTCCTTCTGGTTCTAAGAGGCTTCGACCGTTTGGGTCTTCACATAATGCTGCTAATGCTACCACTTCTCATAGTTCTGCTTCTAATGCTACCACCTCAAGAAGCTTAGATAATAGCTCTTGTCACCAAGATGCTAGCTTTAAACAGTCATTACCAGGTCATGTTCGTGCCCCTGCGGTATTCAGGTGTCATAGGGTTTCGGCTATTGGTAATGGAGAAGATGAGTTTGCTTATATGGCTACAGTTCATATCAGTGGCCATGTTTTTAAGGGGTTCCTGTATGATCAAGGTTCTGATGGGAAAAGCACAATCCCATGTGCTTCGGAACTTCAACTGGGAAATTATAGCAGTGAAAAGAATAGAGAATGTTCTCCTCCAATTGGGATCCTTCCAACTACTACTAATAATAATAATAATGCCTACCCTGCTTCTGGCTGTTGA 1041 0.4649 MLGLRDLLLIAPNPSSLHPHQHHQQHHHHHQQQQQQHHQTQNDHSTLHPLPSSASLSVGLGIFPLLTTTPCVPNDLPHDSTDHNHNHQNTVSNPNFWNLKMCPEVPNPSKKGVIHHHDDDGDGDADVEENNNNGIFGGDFRVCQDCGNRAKKDCCYRRCRTCCKGRGYDCSTHIRSTWVPAARRRERQLTALSGGGAASGSPSGSKRLRPFGSSHNAANATTSHSSASNATTSRSLDNSSCHQDASFKQSLPGHVRAPAVFRCHRVSAIGNGEDEFAYMATVHISGHVFKGFLYDQGSDGKSTIPCASELQLGNYSSEKNRECSPPIGILPTTTNNNNNAYPASGC 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1719 346 Pfam Domain of unknown function (DUF702) 142 299 - -
Mibi07g1719 346 MobiDBLite consensus disorder prediction 35 53 - -
Mibi07g1719 346 MobiDBLite consensus disorder prediction 192 237 - -
Mibi07g1719 346 MobiDBLite consensus disorder prediction 194 237 - -
Mibi07g1719 346 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 251 297 IPR006511 -
Mibi07g1719 346 MobiDBLite consensus disorder prediction 20 34 - -
Mibi07g1719 346 MobiDBLite consensus disorder prediction 12 53 - -
Mibi07g1719 346 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 142 184 IPR006510 -
Mibi07g1719 346 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 23 323 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1719 Mibi-ChrMibi07 34492030 34493788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1719 143 327 C2H2 Transcription Factor Family AT5G12330 52.105 1.62e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mibi07g1719 DUF702 4.7e-55 No_clan