Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1676 ATGACACACAAATCCTCGTTTCTTCTGTCATCCTTCTTGCATTTTCTCTCCTTAGTTATTGCAGCCCATGCAACAAGCTTCACCTCAATAATACTAAATCCTCCTAGACGAACACTAGAAGCAAGCAGAGTTTTTCTCTCAGAACAAAACACAGAGCCACTTGATTATCGGTATTCGTGCTTGGACCAAAGTGGTGTAGCTCCATCAAGCAAATACCAAACCAATCTCCAAAGTCTCATATCTTCACTTTCGTATGATGCTTCGACCAGCAATGGATTTGGTAACAGAATTGAAGGTAGTGATGAAGATATGGTGTATGGTCTTTATCTTTGTAGAGGCGATGTGAATTCAAGTTTGTGTCACTCTTGTGTTCAAGATTCTAGCAGATTGATCCAACAACATTGTGCTAACAATGCTACTGCAGTTTTATGGTACCCCTTTTGCCTCCTCAGGTACTCAAACCGAGATTTCTTTGGCAATCTCACGCTAAGGCCTAGGATTCCCATGTTTGATGCATCGCAAAACTTCACGAGTGCTGGAGAGTTTGACAGTGATGCAAGGATTCTGATGAACGGTTTGATACAGACAGGTTCAGAGACAAATCTAATGTTTGGAACACATATGTTCAACATAAATGGCACCCAGAAAAGGTATGGTTGGGTTCAGTGCAGCAGAGACATAACAAGTGGAGAATGCAGAACATGTCTAAGCAACATGCTTGAAGATGTTGTGAATTGCTGTGAAGGCAAGAGGGTTTGGAGAATCTTTTCTCCTAGTTGTATTGTCATGTATGAGACTCAGCCTTTCTTTTTGAATGACACTGGGTTGATTGCTCCAACAACCCAGCCAGGTGAGGAAAATAGAAGCAACAGGACGATGCTTATTGTTATCTTCATTATAAGTGGAGTAGTAGTACTCACTCTACTGGTTTTCTGCACAATCTACTTCAGATTCTTGAGAAACAAAAACGACAAACATGCAGTGCAGAAAGATGGGCTAAATCCAGTGTTTTCTCATGATCAAACTGACGAAGAGAATAATATGAGTGCTGACCTTCCTATGTTGTCCCTGAAAACTATTCTTCAAACTACTTGCAACTTTTCTGATGAATATAGATTGGGACAAGGTGGATTTGGCTCTGTTTACAAGGGTGTTTTACCTGATGGGAAGGAAATAGCAGTAAAAAGGCTCTCAAAAACCTCAGGGCAAGGATCAAAAGAATTCAAGAATGAAGTGATATTGATTGCAAAATTGCAGCATCGGAACCTTGTGAGATTATTAGCTTGTTGCATTGAGCAAAATGAAAAGCTACTTGTTTATGAGTACATGCCTAATTCGAGCCTTGATTTTCATCTCTTCAATACAGAGATGCGTTCCAAGTTGGAATGGAAACAACGGTTAAGCATCATTAATGGAATTGCAAAAGGGCTTTTGTATCTCCATGAAGACTCTAGACTAAGGGTTATTCATAGGGATCTAAAAGCTAGTAATATATTATTAGACCATGAAATGAATCCAAAAATTTCGGATTTTGGATTGGCAAGAGCATTTGGTGGCAACCAAAGCCAAGCAAATACTCTTAAAGTTGTCGGCACCTATGGTTACATGGCTCCAGAATATGCTATGGAAGGCTTGTTTTCAGTAAAATCCGATGTTTTCAGCTTCGGTGTTCTTTTACTAGAAATCATTAGTGGTAAAAAGAATGGTGGATTCTACCTTTCAGAACATGGTCAAAGCCTTCTCATATATGCATGGAGGCTTTGGTGTGAAGGGAAGGGCTTGGACCTGATGGATTCAATACTAGAAAGGTCATTTGAACCTTCTGAAGTTCTGAAGTGTATCCACATTGGCCTCCTATGTGTCCAAGAAGATGCAGCAGACAGACCAACAATGTCAAGCATAGTACTTATGCTTGCAAGTGATTCAGTGAACCTTCCTAGGCCAACACAGCCTGCATTTTCTGTTGGAAGAGGTTTCACGGAGAGAGAGTCTTCATCAAAAAATACTACCCATGAATCCATCAATGGAGTAACTATTTCTGAAGTAGGAGCTAGATGA 2058 0.4018 MTHKSSFLLSSFLHFLSLVIAAHATSFTSIILNPPRRTLEASRVFLSEQNTEPLDYRYSCLDQSGVAPSSKYQTNLQSLISSLSYDASTSNGFGNRIEGSDEDMVYGLYLCRGDVNSSLCHSCVQDSSRLIQQHCANNATAVLWYPFCLLRYSNRDFFGNLTLRPRIPMFDASQNFTSAGEFDSDARILMNGLIQTGSETNLMFGTHMFNINGTQKRYGWVQCSRDITSGECRTCLSNMLEDVVNCCEGKRVWRIFSPSCIVMYETQPFFLNDTGLIAPTTQPGEENRSNRTMLIVIFIISGVVVLTLLVFCTIYFRFLRNKNDKHAVQKDGLNPVFSHDQTDEENNMSADLPMLSLKTILQTTCNFSDEYRLGQGGFGSVYKGVLPDGKEIAVKRLSKTSGQGSKEFKNEVILIAKLQHRNLVRLLACCIEQNEKLLVYEYMPNSSLDFHLFNTEMRSKLEWKQRLSIINGIAKGLLYLHEDSRLRVIHRDLKASNILLDHEMNPKISDFGLARAFGGNQSQANTLKVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIISGKKNGGFYLSEHGQSLLIYAWRLWCEGKGLDLMDSILERSFEPSEVLKCIHIGLLCVQEDAADRPTMSSIVLMLASDSVNLPRPTQPAFSVGRGFTERESSSKNTTHESINGVTISEVGAR 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1676 685 FunFam Cysteine-rich receptor-like protein kinase 28 56 156 - -
Mibi07g1676 685 FunFam Liguleless narrow1 443 646 - -
Mibi07g1676 685 Pfam Salt stress response/antifungal 66 154 IPR002902 -
Mibi07g1676 685 Pfam Salt stress response/antifungal 174 266 IPR002902 -
Mibi07g1676 685 SMART serkin_6 367 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1676 685 ProSitePatterns Protein kinases ATP-binding region signature. 373 395 IPR017441 GO:0005524
Mibi07g1676 685 CDD STKc_IRAK 373 638 - -
Mibi07g1676 685 Gene3D - 54 157 IPR038408 -
Mibi07g1676 685 Gene3D - 168 269 IPR038408 -
Mibi07g1676 685 SUPERFAMILY Protein kinase-like (PK-like) 350 654 IPR011009 -
Mibi07g1676 685 FunFam Cysteine-rich receptor-like protein kinase 10 167 269 - -
Mibi07g1676 685 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 63 680 - -
Mibi07g1676 685 ProSiteProfiles Protein kinase domain profile. 367 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1676 685 ProSiteProfiles Gnk2-homologous domain profile. 164 269 IPR002902 -
Mibi07g1676 685 MobiDBLite consensus disorder prediction 654 675 - -
Mibi07g1676 685 MobiDBLite consensus disorder prediction 659 675 - -
Mibi07g1676 685 Gene3D Phosphorylase Kinase; domain 1 330 442 - -
Mibi07g1676 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Mibi07g1676 685 Pfam Protein tyrosine and serine/threonine kinase 372 636 IPR001245 GO:0004672|GO:0006468
Mibi07g1676 685 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 334 442 - -
Mibi07g1676 685 Gene3D Transferase(Phosphotransferase) domain 1 443 645 - -
Mibi07g1676 685 ProSiteProfiles Gnk2-homologous domain profile. 54 157 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1676 Mibi-ChrMibi07 33197641 33202058 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1676 44 653 Receptor kinase-like Gene Family AT4G05200 41.148 2.84e-169 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi07g1676 PK_Tyr_Ser-Thr 7.2e-48 CL0016