Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1668 ATGGCTGAAGAACCACAGAGGGTAGTGATGATAGTGGATGCTTCAAAAGATGTCTCTTCAAAAGCCATAATGAAGGCCCTAGAAAAGACATGTCCTCAGGCTGGAGATGAGGTTAAGCTCATAGCTCTTCTTGAAGAGCTCAGCAGTCCAATGGGAATCAAGATCAGGGTCCATGACGACTCATTTTTTGCAGCAAACCGAAAAATTGTTGGCGGGCAATTGGCTAAAATAAGGGAGGACTTTAAGAAAAGTTCAGAAATCACGAAACTTTCTGAATATTGTGAAATAAAAAAGATGGATTTCCAAATTGATGTGGTAGCACACCCATTCATAGAGGTTGCTTCTGATGCTGCGAAATGCTTAGGGACAACATGGTTGATCGTTGACAGACATGTTAGCAGAGATAAGGAAAAATGCCTTTCACCTTGTGGCATATTAAGAATAAGAAGTAACAACACTATTGAAAAGTTGTGGGGTCCCGAGAAGTACAAACCACATTCCGCAGGGCTTAGATCATCACCAAGTGAAGAATTACTGAACGACAAAGATGAGGAGGGAGAAGCTCAAAATATAGAACAAGAGAAAGAAAGAGGCGCTAATGAGGAGTCTCAGTGTGAGATGGAGACAGAATTTAAAAACCCACTTTGTTCTGTGTGTAAAAACAAAAGACCAAAAGTTGAATGGATGAAAGATTTCAGTTACACAGAACTGTGGAAAGCAACACAAGGATTCTCCCAAAAGAACTTTCTATCAGAGGGTGGATTTGGAGCTGTGTACAAAGCAGAGCTGAATGGAATGAGTATAGCCGTTAAGAAACTCAAAAAAGCAAGTATACAAAGAGAGAAAGAATTCAAATCTGAAGTTAAATTACTTAGCAGAGCAAGGCACGAGAATGTGGTCATTCTTATGGGCTCCTGCTCTGAAGGAAAGCATAGATTTCTTGTTTATGAATATATTTGCAATTGTTCATTGGATCAACATTTATCACAGCACTCTCGAATTCCTCTTACCTGTGAAGAGAGGATCAAAGTTGCAGTTGGAGTTTCAAAGGGCTTGCAATACTTACATAAGAATAACATTATACACAGAGATGTGAAACCAAACAATATCCTTCTCACACATGATCTTCAAACTCTGCTGGGGGACTTTGGTTTGGCAAGAAATCTGAATGAAGACTCAATCCAGTCAACAGAGGTTATTGGAACTTTAGGGTATTTGGCACCTGAATATGCAGAATATGGGAAAGTGTCAGCCAAGATGGATGTATATTCTTTTGGGGTGGTTCTGCTAGAACTCCTCACAGGAATGGGGACAATAGACAAAAGACTTGAGGGGAAAAGTCTTGTTGGATGGGCACGACCACTACTAGAAGACAGGAAATATCATGATCTAATTGATGAAAGGATAATCAATTCCCATGATGTTCATCAACTATTTTGGATGGTCGGAATAGCAGAAAAATGTCTAACTAGGGATCCTCATAAAAGACTAACTATGGTTAAAGTGGTTAATGCTTTAAGTTGCATATTGGAAGGCAACACATGTAGCATACCAAGAGACTACTATTCCCCAGCAAGATCAGAGGCATCTTATAGCTCATCAGAAGATGAGGATCAAGAAGCCTTTGAATCAGAAGGTGAGTTAGTAAGCCAGAGCTCAGATTCTTCATTCTGTATTATTAGCTTGGACATAATGAGCCAGATTATTGGAAGACTCCCACCATCACCTTCAGTTTTGACGACTTATTGA 1749 0.3974 MAEEPQRVVMIVDASKDVSSKAIMKALEKTCPQAGDEVKLIALLEELSSPMGIKIRVHDDSFFAANRKIVGGQLAKIREDFKKSSEITKLSEYCEIKKMDFQIDVVAHPFIEVASDAAKCLGTTWLIVDRHVSRDKEKCLSPCGILRIRSNNTIEKLWGPEKYKPHSAGLRSSPSEELLNDKDEEGEAQNIEQEKERGANEESQCEMETEFKNPLCSVCKNKRPKVEWMKDFSYTELWKATQGFSQKNFLSEGGFGAVYKAELNGMSIAVKKLKKASIQREKEFKSEVKLLSRARHENVVILMGSCSEGKHRFLVYEYICNCSLDQHLSQHSRIPLTCEERIKVAVGVSKGLQYLHKNNIIHRDVKPNNILLTHDLQTLLGDFGLARNLNEDSIQSTEVIGTLGYLAPEYAEYGKVSAKMDVYSFGVVLLELLTGMGTIDKRLEGKSLVGWARPLLEDRKYHDLIDERIINSHDVHQLFWMVGIAEKCLTRDPHKRLTMVKVVNALSCILEGNTCSIPRDYYSPARSEASYSSSEDEDQEAFESEGELVSQSSDSSFCIISLDIMSQIIGRLPPSPSVLTTY 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1668 582 PANTHER OS01G0253100 PROTEIN 190 508 IPR045271 -
Mibi07g1668 582 ProSiteProfiles Protein kinase domain profile. 244 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1668 582 Gene3D Transferase(Phosphotransferase) domain 1 320 520 - -
Mibi07g1668 582 MobiDBLite consensus disorder prediction 176 204 - -
Mibi07g1668 582 Gene3D Phosphorylase Kinase; domain 1 216 318 - -
Mibi07g1668 582 Pfam Protein kinase domain 246 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1668 582 SMART serkin_6 244 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1668 582 MobiDBLite consensus disorder prediction 164 204 - -
Mibi07g1668 582 SUPERFAMILY Protein kinase-like (PK-like) 228 517 IPR011009 -
Mibi07g1668 582 MobiDBLite consensus disorder prediction 528 549 - -
Mibi07g1668 582 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 319 521 - -
Mibi07g1668 582 FunFam Proline-rich receptor-like protein kinase PERK8 206 318 - -
Mibi07g1668 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1668 Mibi-ChrMibi07 32357177 32361160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1668 232 511 Trihelix Transcription Factor Family AT5G38560 46.075 8.21e-76 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mibi07g1668 Pkinase 8.5e-51 CL0016