Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1659 ATGCAAGGAGGATCAGGTCAAAACTCGAATCTACCTTCAGGATCCATTGATAAGACAAGGGTTTTAGATGTTAAACCTCTGCGTACTTTGGAGCCTGTGTTTCCAAATTCAGCTCAGGCTACTACATTTGATGGCGCCTGTCCCTCTGGGTTTAATTCCTTTTTCCCATTCGGTGCATCACAAGGACCTCAAGCATCGCCTCCTAAGGTTCCTATGCCTACTCCATTACGGTCTTTTAGATCTGACCCTGGAGAGGTAACACCGGTTGAGTTTCGTGGAGCATCCAATGGAAATAATACTGATAGCCAACATCATGCGGCGCCAAACAAATCCAAATCCTCCAAAAAGAAGCCTAGAACAAGTCAAGATCTGCAAATTGATGCCAGTTCTTTATTAGGCATTGGAAAAAGTGAACGTGAAGATGGTAATCGGGAATTGGTTAATCTTCTACTTGTGACTTTTGATGCGCTTAGGAGGAGGATCAGTCAGCTTGAGGATTCCAAGGAATTGACATTAGGATTGAGCAAGCGAGCAGATATGAGAGCTGGAAACATTTTGATGAGTGCAGGGATTCGAACAAACACAAGGAAGAGAATAGGAGCTGTGCCTGGGGTTGAGATTGGGGACATTTTCTTTTTTCGACTGGAATTATGTATTGTGGGCCTGCATAGTCAGTCTATGGGCGGGATTGACTACACTAATATGGGCGGTAAAAATGAGTCTGATCCTTTAGCTTTAGCCATTGTTTCATCTGGAAAATATAATGACAACACAGAGGAAAGTGATATTTTGATCTATAGTGGTCAGGGTGGGGATAAGGGGGATGATCAGAAGCTAGAAAGGGGTAATCTTGCTTTGGATAGGAGCTTGCGACAGAAGAATGATGTCAGAGTAATACGGGGCATGAAGGATCAAATGAATTCAACTTCAAAGGTCTATATTTATGACGGGCTGTATAAAATCCAGGATTCATGGATAGAGAAAGGGAAATCTGGTGGTGGAATATTCAAGTACAAGTTGGTGAGAGTGCCAGGACAACCCAGGGCCTTTGCTGCTTGGAAATCTATTGAAAAGTGGAAAGCTGGCAATGCTTCTAGGACTGGGCTCATTCTTGCAGACCTCTCCTCAGGAGCTGAGAAAATTCCTGTGTCACTTGTCAATGATGTGGATGATGAAAAAGCACCTGGTTATTTCACTTATCTCCATTCTCTTAGATATTCAAAGTCCTTCATTGTTTCTAATCCTTATGATTGTTGCAACTGCCAAAAAGATTGCATTCCTGGTGATTTAAATTGTTCTTGCATACGGAGAAACGACGGTGATTTTCCATACACAGGGAATGGCATTTTAGTGAGTCGGAGGAAATTGGTTCACGAATGTAGCCCTTCATGTCAATGCTCTCCTAACTGCAAAAATCGTGTATCCCAAACTGGGTTGAAGTATCGTATGGAAGTTTTCAAAACAAAGGATAGAGGATGGGGCCTTCGAGCATTGGATCCTATTCGTGCTGGTACGTTTATTTGTGAGTATGCAGGAGAAGTTATTGATAGAGCCAGGGTAAGTTGGAATGGCAATAATGATGAGTATGCTTTTGACACATCTCGAATTTATCATCCGTTCAAGTGGAACTATGAACACAAGTTACTTGAAGAAGCTGGTTCAAATGATTGTGGTGAGGATTATAATATCCCATCTCCTCTAATTATTAGTGCCAAGAATGTTGGAAATGTGGCTAGATTCATGAATCATAGTTGCTCCCCAAATAATTGA 1770 0.4198 MQGGSGQNSNLPSGSIDKTRVLDVKPLRTLEPVFPNSAQATTFDGACPSGFNSFFPFGASQGPQASPPKVPMPTPLRSFRSDPGEVTPVEFRGASNGNNTDSQHHAAPNKSKSSKKKPRTSQDLQIDASSLLGIGKSEREDGNRELVNLLLVTFDALRRRISQLEDSKELTLGLSKRADMRAGNILMSAGIRTNTRKRIGAVPGVEIGDIFFFRLELCIVGLHSQSMGGIDYTNMGGKNESDPLALAIVSSGKYNDNTEESDILIYSGQGGDKGDDQKLERGNLALDRSLRQKNDVRVIRGMKDQMNSTSKVYIYDGLYKIQDSWIEKGKSGGGIFKYKLVRVPGQPRAFAAWKSIEKWKAGNASRTGLILADLSSGAEKIPVSLVNDVDDEKAPGYFTYLHSLRYSKSFIVSNPYDCCNCQKDCIPGDLNCSCIRRNDGDFPYTGNGILVSRRKLVHECSPSCQCSPNCKNRVSQTGLKYRMEVFKTKDRGWGLRALDPIRAGTFICEYAGEVIDRARVSWNGNNDEYAFDTSRIYHPFKWNYEHKLLEEAGSNDCGEDYNIPSPLIISAKNVGNVARFMNHSCSPNN 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1659 589 MobiDBLite consensus disorder prediction 54 128 - -
Mibi07g1659 589 ProSiteProfiles SET domain profile. 481 589 IPR001214 GO:0005515
Mibi07g1659 589 SUPERFAMILY SET domain 359 588 IPR046341 -
Mibi07g1659 589 ProSiteProfiles YDG domain profile. 200 342 IPR003105 -
Mibi07g1659 589 SUPERFAMILY PUA domain-like 182 364 IPR015947 -
Mibi07g1659 589 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 59 588 IPR025794 GO:0016571
Mibi07g1659 589 Gene3D SET domain 363 589 IPR046341 -
Mibi07g1659 589 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 61 588 - -
Mibi07g1659 589 ProSiteProfiles Pre-SET domain profile. 417 478 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi07g1659 589 Pfam SAD/SRA domain 199 346 IPR003105 -
Mibi07g1659 589 SMART set_7 481 589 IPR001214 GO:0005515
Mibi07g1659 589 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 183 361 - -
Mibi07g1659 589 Pfam SET domain 492 589 IPR001214 GO:0005515
Mibi07g1659 589 Pfam Pre-SET motif 375 473 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi07g1659 589 SMART preset_2 371 465 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi07g1659 589 SMART G9a_1 195 346 IPR003105 -
Mibi07g1659 589 MobiDBLite consensus disorder prediction 92 107 - -
Mibi07g1659 589 Gene3D - 183 361 IPR036987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1659 Mibi-ChrMibi07 32140976 32142836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1659 1 588 Su(var)3-9 homologs AT1G73100 52.104 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi07g1659 SAD_SRA 1.6e-45 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g1326 01 17269597 17271588 Mibi07g1659 07 32140976 32142836 CCT
Mibi07g1659 07 32140976 32142836 Mibi07g1659 07 32140976 32142836 ECH