Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1648 ATGGACGATGGCGACTATTGTTGCAGTGATGATGAATATTACAATTACTCCGATCAGGATTTCATTGACGAAGTAATGGAAGAAGAAGGTGACAAGTCAGTCATGTCTAATAATAAGGGCCCCACAGCTTTGGTGATCACAAAAGAATCACTTGTCACTGCACAGGAAAAAGATATACAAAAAGTGATGGAGATGCTTTCAGTCAAAGAAAGCCATGCACGTACTCTTCTCATTCATCATCGTTGGAATCTAGAGAAGCTTTTTGGAGTTTATGGAGAAAAGGGAAAATTCGACTTGTTGGCCCAAGCAGGAGTTATCATGTTTGAACCATCCGCATCATCAGCTCCTTCTTCATCATTAGTATTTTGTGAAATATGCTTAGAGGATGTTCCTAGGGATAAAGTAACAACAATAGATTGTGGTCACTATTTTTGCAACCCTTGTTGGACATCTCACTTTATAGTTAATATAAACGAAGGTAAAAGCAAGCGCATCAAGTGCATGGCACACAAATGCAAAGTGATATGTGATGAAAACATTGTGAGGGATCTTGTTGGTAGAGAGGAACCTAACACGGCGGAGAAATTTGAAAGGTTTCTTCTAGAATCATACATTGAAGACAACAAGAAAGTCAAGTGGTGCCCTAGTGTGCCTCATTGTGGGAACGCAATAAGTGTGGAGGATGAAGAATTATGTGAGGTTGAATGTAGTTGTGGCTTCCAATTTTGCTTTAGTTGCACGAAAGAGGCGCATTCGCCGTGTTCTTGTTCTTTGTTCGAGTTATGGTTGGTTAAGTGTAGAGATGAATCAGAGACTGTGAATTGGATCACGGCTCACACTAAGCCTTGTCCTCATTGTAACAAATCGGTGGAGAAGAATGGTGGATGCAATTGGGTTAGTTGTATTTGTGGCGGGGCATTTTGTTGGATATGTGGTGGAGGCACTGGAAGGGAACACAGTAGTTCATCTATAGCGGGACATAGTTGTGGCCGTTACACGCAGAAAGAGAAAGAAGCAGAATTTGCCAAGAGAAATCTGATTAGGTACGTGCATTATCATAATAGATACAAAGCTCACATGGACTCTTTGAAGCTTGAAGGTAAGTTGAAAGAGACTATGCAAGGGAAGGTTGCTCGTTTAGAGGAGAAGTATGCTTTGAGGATAAGAGAGTATAGTTGGGTCAATGATGGGCTCTCGAGGCTCTTTAGATCGAGGAGAGTGCTTTGTTATTCGTACCCATTTGCGTATTATATGTTTGGAGGTGAGGTTTTCAAAGATGGCATGTCAGTTGAGGAGAGGCAAAGGAAGCAGAACTTGTTTGAGGATCAGCAGCAGCAACTAGAGGCAAATGTGGAGAGGCTCTCTAAATATCTTGAGGAAAGGTTTGATGAGTTTGGAGGTGATAAAGTAGACAAAACTAGGGATCAAGTGGTGAACCTCTCAAGCATTGTTGATAATCTATGTGAGAAAATGTATGAGTGCATTGAAAATGACTTGTTGGGATCTCTTAATCATCAGATTGCTCCTTACAATTCAAAGGGCATAGAGAAGGCATCTCAAATCCTTGCAGACTCTTCTTAA 1581 0.4105 MDDGDYCCSDDEYYNYSDQDFIDEVMEEEGDKSVMSNNKGPTALVITKESLVTAQEKDIQKVMEMLSVKESHARTLLIHHRWNLEKLFGVYGEKGKFDLLAQAGVIMFEPSASSAPSSSLVFCEICLEDVPRDKVTTIDCGHYFCNPCWTSHFIVNINEGKSKRIKCMAHKCKVICDENIVRDLVGREEPNTAEKFERFLLESYIEDNKKVKWCPSVPHCGNAISVEDEELCEVECSCGFQFCFSCTKEAHSPCSCSLFELWLVKCRDESETVNWITAHTKPCPHCNKSVEKNGGCNWVSCICGGAFCWICGGGTGREHSSSSIAGHSCGRYTQKEKEAEFAKRNLIRYVHYHNRYKAHMDSLKLEGKLKETMQGKVARLEEKYALRIREYSWVNDGLSRLFRSRRVLCYSYPFAYYMFGGEVFKDGMSVEERQRKQNLFEDQQQQLEANVERLSKYLEERFDEFGGDKVDKTRDQVVNLSSIVDNLCEKMYECIENDLLGSLNHQIAPYNSKGIEKASQILADSS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1648 526 FunFam RBR-type E3 ubiquitin transferase 252 500 - -
Mibi07g1648 526 ProSiteProfiles Zinc finger RING-type profile. 123 171 IPR001841 -
Mibi07g1648 526 ProSiteProfiles TRIAD supradomain profile. 119 333 IPR044066 -
Mibi07g1648 526 Pfam IBR domain, a half RING-finger domain 194 256 IPR002867 -
Mibi07g1648 526 SUPERFAMILY RING/U-box 275 316 - -
Mibi07g1648 526 SUPERFAMILY RING/U-box 118 206 - -
Mibi07g1648 526 SUPERFAMILY RING/U-box 194 263 - -
Mibi07g1648 526 Coils Coil 430 460 - -
Mibi07g1648 526 Gene3D - 252 500 - -
Mibi07g1648 526 SMART ibrneu5 194 256 IPR002867 -
Mibi07g1648 526 SMART ibrneu5 264 329 IPR002867 -
Mibi07g1648 526 FunFam RBR-type E3 ubiquitin transferase 117 208 - -
Mibi07g1648 526 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 50 400 IPR031127 GO:0004842|GO:0016567
Mibi07g1648 526 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 208 IPR013083 -
Mibi07g1648 526 Pfam Ariadne domain 334 522 IPR045840 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1648 Mibi-ChrMibi07 31981474 31983054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1648 63 523 ARIADNE family AT2G16090 66.239 0.0 634