Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1645 ATGTCTGTTAGTAGGAATTCGACCCAAGAAGTAAATTTCGGGCATTCTGAAGCATTAAGCACGTCTCAGAAGGAAATTAACGATGCGGATGCGAGGTTAGTATATTTAAATGATCCTTTGAGGACGAATGAGAAGGTTCGATTTTCTGGGAATTCGATTCGTACTGCGAAATACTCTATCATCACCTTTTTGCCGAGGAATTTATTTGAACAGTTCCATAGAGTTGCTTACATTTATTTTCTTATAATTGCCATACTTAATCAGCTCCCCCAGATTGCGGTTTTTGGTATTGGGGTTTCTTTTTTGCCGTTAACATTTGTGCTGGTAGTTTCGGCTGTGAAGGATGCATATGAGGACTGGAGGCGGCATCAGTCTGATAAAATTGAGAACAACAGGTTAGCATCAGTTGTGGTTGATGACAATTTCGTTAAGAAAAAGTATAAGGACATTAGAGTTGGTGAAATCGTTAAAATCCATGCAAATGAGACTATTCCTTGTGATATGGTGTTGCTGTCAACTAGTGATCCTACTGGAGTTGCATATGTTCAGACTACTAATTTAGATGGAGAGTCGAATTTGAAGACTCGTTATGCGAAATCTGAGACTCTCTCGCTGTTGCCTGAGAAGGAGAAGATTAATGGGTTGATTGAGTGTGAGAAACCCAATAGGAACATTTATGGGTTTCAGGGTAGCATGGTTATTGATGGGAAGAGATCATCACTTGGATCATCCAATATTGTTCTCCGAGGTTGTGAAATCAAGAATACCAATTGGGCGATCGGTGTTGCTGTATATTGTGGCCAAGAAACTAAAGCGATGCTCAATAGCTCTGGGGCTCCATCAAAGAGGAGTCGGCTGGAGACTCGTATGAACAAGGAGATCATCTTGATCTCTTGCTTTCTTGCAACTTTGTGTACGGTTGTCTCTGTTTGTACTGCTGTTTGGTTAAGGCACTACAAAGATGAATTGGATATCTTGCCCTATTACCGAAAACTTGATTTTTCAAGTGGAAAGGCAAAAAACTACAAATATTCTGGCTGGGGATTGGAAATACTGATTGCTTTCCTCATGTCAGTTATAGTGTTCCAAGTCATGATTCCCATATCATTGTACATTTCCATGGAGCTTGTCCGGATTGGTCAGGCCTACTTCATGACCAGAGACACTAAACTGTATGATGAGGCATCAAATTCCAGATTTCAGTGTAGATCTTTAAATATAAATGAAGACTTGGGACAAATTAAATATATTTTTTCAGACAAAACTGGCACACTTACTGAGAACAAGATGGAATTTCAATGTGCAAGCATCTGGGGGGTTGATTACAGCTCTCAAGATGCCAATCTGGGAAACGAGCCTGTCTCAGTTGATGGAATGATATTGAGGCCAAAGGTGAAGGTGAAAGTTGATCCAGAGCTTTTGCAATTAACAAGAGGTGGATTAAAAAACAAGGACAGTAAACATATTTGTGAATTTTTCCTTGTGTTGGCAGCCTGCAATACTATTGTGCCTCTTCTTGTTGACACATCTGATCCTGCAGTCAAATTGATTGATTACCAAGGAGAGTCACCAGATGAGCAAGCATTGGCCTACGGTGCCGCCGCCTATGGCTTTACACTCATAGAACGAACTTCAGGCTATATGGTAATTGATATTCAAGGACAAAGACAAAAGTTCAAAGTCTTGGGTTTGCATGAATTTGATAGTGACCGGAAGAGGATGTCTGTTATATTGGAGTTTCCTGACAATTCTGTGAAAGTTTTTGTCAAAGGTGCTGATACATCAATGTTTAGTGTGATAGATAAAGCACTAAGTAAGGATATAGTACGTGCCACTGAAACCCATCTTCACTCTTATTCCTCCCTCGGTTTGAGAACTCTTGTTATCGGGATGCGGGAATTAACTCCTTCAGAATTTGACCAATGGCACTGTGCCTTTGAGGAAGCAAGCAATGCTCTGATTGGTAGGGCTGCTTTGCTCCGCAAGGTTTCCAGCAGTGTGGAAAACAATCTCTGCATTTTGGGTGCATCTGCTATTGAAGATAAGCTGCAGCAAGGGGTGCCTGAGTCCATTGAATCTCTAAGGACGGCAGGTATCAAAGTATGGGTGTTGACTGGTGACAAACAAGAAACCACCATATCAATTGCTTACTCCTCAAAGCTCCTAACAGGTGATATGGCTCAAATTGTAATTAATAGCAACAACAGAGAGTCATGTAGAAGGAAGTTACACGATGCTCTCGTAAAGTCTAACAAACTCATGGCCATGTCTGGCGGTGCTAACAATACTGGAGAAAGTACTGAACCTGTAACAACTCAATTAGCATTAATCATTGATGGTACCAGCCTTGTATACATTCTTGAAAGTGAAAACATTGAACTTGAGGAACAGCTCTTTCAACTAGCATGTAAATGTACTGTAGTTCTGTGCTGTCGAGTGGCTCCACTGCAGAAGGCTGGGATTGTTTCCCTTGTGAAGAAGAGGACTTTTGACATGACACTAGCCATCGGAGACGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTCGGCATCAGTGGACAGGAGGGTCGGCAAGCTGTAATGGCATCAGATTATGCAATGGGACAGTTTAGGTTTATAGTTCCTCTCTTATTGGTCCATGGCCATTGGAATTATCAACGGTTGGGTTACATGGTGCTGTACAATTTGTACAGGAATGCTATCATTGTTCTTGTCCTATTTTGGTATGTGCTGTACACCGCCTTCACTTTGACAACTGCTATAACTGAATGGAGCAGTTTGTTATATTCTGTAGTTTACACTGCATTTCCAACAATTTTTGTTGGCATTCTTGACAAAGATCTCAGTAAAAGGACTCTCCTGAAGTATCCTCAGCTTTATGGAGCTGGGCAGAGAAATGAGGCCTACAATGAACATTTATTTTGGTTGACAATGGCTGATACTTTGTGGCAAAGTATTGTAGTGTTCTTTGTTCCTCTTTTTGCTTATTGGGGAAGCACTATCGACATATCAAGCATTGGAGATCTTTGGACTCTTTCAGTGGTTATTTTGGTTAATTTGCACTTGGCCATGGATGTCATAAGGTGGACATGGATTACTCATGCAGCCATTTGGGGTTCTGTTATTGCAACCTTCATCTCTGTCATGATCATTGATGCTATACCCACATTTCCTGGTTACTGGGCCATATTTCATGTCACCGGAACACGTTTGTTCTGGTTATGTTTACTTGGATCGATTGTAGGAGCTTTGCTTCCTCGTTTTGTTGTAAAATTTGTGCATCAGTATTATTGCCCTGACGATATTCTAATTTCAAGAGAAGCTGAAAAGAAGTCTGTGAATAATACAAGAGTGGTTGGTGGTGGGCAGATAGAAATGCATGCTATCAGATAA 3405 0.4097 MSVSRNSTQEVNFGHSEALSTSQKEINDADARLVYLNDPLRTNEKVRFSGNSIRTAKYSIITFLPRNLFEQFHRVAYIYFLIIAILNQLPQIAVFGIGVSFLPLTFVLVVSAVKDAYEDWRRHQSDKIENNRLASVVVDDNFVKKKYKDIRVGEIVKIHANETIPCDMVLLSTSDPTGVAYVQTTNLDGESNLKTRYAKSETLSLLPEKEKINGLIECEKPNRNIYGFQGSMVIDGKRSSLGSSNIVLRGCEIKNTNWAIGVAVYCGQETKAMLNSSGAPSKRSRLETRMNKEIILISCFLATLCTVVSVCTAVWLRHYKDELDILPYYRKLDFSSGKAKNYKYSGWGLEILIAFLMSVIVFQVMIPISLYISMELVRIGQAYFMTRDTKLYDEASNSRFQCRSLNINEDLGQIKYIFSDKTGTLTENKMEFQCASIWGVDYSSQDANLGNEPVSVDGMILRPKVKVKVDPELLQLTRGGLKNKDSKHICEFFLVLAACNTIVPLLVDTSDPAVKLIDYQGESPDEQALAYGAAAYGFTLIERTSGYMVIDIQGQRQKFKVLGLHEFDSDRKRMSVILEFPDNSVKVFVKGADTSMFSVIDKALSKDIVRATETHLHSYSSLGLRTLVIGMRELTPSEFDQWHCAFEEASNALIGRAALLRKVSSSVENNLCILGASAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQETTISIAYSSKLLTGDMAQIVINSNNRESCRRKLHDALVKSNKLMAMSGGANNTGESTEPVTTQLALIIDGTSLVYILESENIELEEQLFQLACKCTVVLCCRVAPLQKAGIVSLVKKRTFDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDYAMGQFRFIVPLLLVHGHWNYQRLGYMVLYNLYRNAIIVLVLFWYVLYTAFTLTTAITEWSSLLYSVVYTAFPTIFVGILDKDLSKRTLLKYPQLYGAGQRNEAYNEHLFWLTMADTLWQSIVVFFVPLFAYWGSTIDISSIGDLWTLSVVILVNLHLAMDVIRWTWITHAAIWGSVIATFISVMIIDAIPTFPGYWAIFHVTGTRLFWLCLLGSIVGALLPRFVVKFVHQYYCPDDILISREAEKKSVNNTRVVGGGQIEMHAIR 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1645 1134 FunFam Phospholipid-transporting ATPase 518 651 - -
Mibi07g1645 1134 Pfam E1-E2 ATPase 134 374 - -
Mibi07g1645 1134 FunFam Phospholipid-transporting ATPase 673 876 - -
Mibi07g1645 1134 Pfam Phospholipid-translocating ATPase N-terminal 34 96 IPR032631 -
Mibi07g1645 1134 SUPERFAMILY HAD-like 413 882 IPR036412 -
Mibi07g1645 1134 Pfam Cation transport ATPase (P-type) 523 597 - -
Mibi07g1645 1134 SFLD p-type atpase 402 887 IPR044492 -
Mibi07g1645 1134 SUPERFAMILY Calcium ATPase, transmembrane domain M 47 1103 IPR023298 -
Mibi07g1645 1134 Gene3D - 103 275 - -
Mibi07g1645 1134 PRINTS P-type cation-transporting ATPase superfamily signature 715 725 - -
Mibi07g1645 1134 PRINTS P-type cation-transporting ATPase superfamily signature 418 432 - -
Mibi07g1645 1134 PRINTS P-type cation-transporting ATPase superfamily signature 836 855 - -
Mibi07g1645 1134 Gene3D - 520 655 IPR023299 GO:0000166
Mibi07g1645 1134 Gene3D - 670 876 IPR023214 -
Mibi07g1645 1134 Pfam Phospholipid-translocating P-type ATPase C-terminal 864 1103 IPR032630 -
Mibi07g1645 1134 ProSitePatterns E1-E2 ATPases phosphorylation site. 420 426 IPR018303 -
Mibi07g1645 1134 SFLD C1.7: P-type atpase like 402 887 - -
Mibi07g1645 1134 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 48 1109 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Mibi07g1645 1134 PRINTS Sodium/potassium-transporting ATPase signature 411 432 - -
Mibi07g1645 1134 PRINTS Sodium/potassium-transporting ATPase signature 913 933 - -
Mibi07g1645 1134 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 424 686 IPR023299 GO:0000166
Mibi07g1645 1134 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 21 1114 - -
Mibi07g1645 1134 FunFam Phospholipid-transporting ATPase 106 275 - -
Mibi07g1645 1134 SUPERFAMILY Calcium ATPase, transduction domain A 131 272 IPR008250 -
Mibi07g1645 1134 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 807 923 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi07g1645 1134 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 99 200 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi07g1645 1134 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 350 439 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi07g1645 1134 FunFam Phospholipid-transporting ATPase IC 415 427 - -
Mibi07g1645 1134 CDD P-type_ATPase_APLT_Dnf-like 50 996 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1645 Mibi-ChrMibi07 31856333 31861421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1645 2 1134 Primary Pumps ATPases AT5G04930 67.274 0.0 1620