Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1642 ATGTCAACACTCTCCCACACAACAAAGCTAGCAATTTCAATGGTAATGGCGAAACAGCTTCATCGCCATTTTCATATTTTCTTCTTCATTGTGTTTTTCTTTCTTGCCTTCCACCGTACACATCAGTTAGAAAATTCTCAGTCTCATGCTCTTCTGAAATTCCAGAAGCTTCTGGGTTACCCACCATCTCTAAGCAGCTTAAGAAGCACAAAAGATTTCTGCAACATTGAGCCCACCAACTATTTGACAATAGTCTGCTATGAAGATAACGTAACACAGCTTCATGTTTTTGGTGACAATGGGGTTTCTCCTTTACCTCAAGATTTCTCTTCAGATTCACTATTTGCCACTTTGGGTACTCTTTCTAGCTTGAAAGTTCTTTCTCTGGTTTCTATGGGTCTTTGGGGCCCTATACCTGAAAGTATTTCAGAACTTTCTTCTTTGGAGATTCTTAACATTAGTACAAATCATTTCAGTGGAGAAATCCCAAACCAACTTTCTCTGTTGAAGGATTTGCAATCTTTGGTTCTTGATAATAATGATTTCTCAGGTGAAATTTCCATGTGGGTAGGTTCGCTTCAAGGTTTAGCTGTTTTGAGTATGAGGAGAAATTTTCTTAGTGGGTCTGTGCCAACTTCTGTTTTTCATCTTCAGACTTTGAGGGTTTTGGATCTATCAAATAATCATTTACATGGTGAATTACCTGGTCTTGATAATTTGAAAAATCTACAAGTTCTTAATCTGGAAAACAACACACTGGGACCTCATTTTCCATCTCTACCCACCAAATTAGTTTCACTAGTGCTTAGAAATAACAGCTTCAGGTTTGGTGTACCTTCTAATTTAAGCTCTTACTACCAACTTCAAAAGCTGGACCTTTCATTAAATGGATTTGTGGGACCATTTCTACCATCTTTACTTTCTTTGCCATCCATCAAATACCTTGATGTTTCAGCAAATAAATTTACTGGGATGCTATTTAGTAATTACTCTTGCAATTCTGATATCCTTTTTGTGAATCTATCCTCAAATCTCTTGAAAGGGGAACTTCCCAGTTGTTTGAAACCAGATAGAAAAGTGGTTTCTTTGTATGCTAGAAATTGTTTTTCAAATGAAAACCAAGATCAGCATCCTCCCACATTCTGTCAAACTGAGGCTCTGGCAGTGAATGTTTTGCCTCATGAACACAAGCAGAGAAAAAGAACCACTGGTAAAGCTGTTATTGTGTCCAGTATGGGAGGAATTGTTGGAGGAGCCTTTGTTTTTGGAGTTGTTTTTTTGGTAATTTTACGAGTAAACAAAAAAGGCTTTGTGAAAGACCCTGAAGGGTCCTCATTGGAGAAAGATATAAGCCAGATGAATGATAAAGATGATGAAGTTAAAACGCCTAGAACTGTATTGTCAGTAATGGAGAATATCATCGGCAGAGTCCCGAAGCCTAACAAGGAATCTGTGAAAACACTTGCAAGATCCATGATGGCTCATGTCGTTAAAAAGGTTCATCACAGACATGTGAGACCTGCAAGGTCCATAGTGGAGCATGTCTCATCAGTTAACACAGCAAAACTGCTCACAGATGCAAGGTATATTTCACAAACGATGAAGATGGGTGCCAGCATTCCTGCTTATAGGACTTTTGCTTTGGATGAACTCAAGGAGGCTACAAACAATTTTGATGCATCAAGTTTTATAAGTGAAGGTGCACGTGGTCAGATCTACAAAGGGTCTCTCTCTGATGGAACTCAGATTGCTATCAGAAGTTTGAAAATGAAGAAAAGACATGGCTCTCAGACCTATATGCATCATATTGAATTGATTTCAAAACTGAGGCATCCACACTTGGTCAGTGCTCTAGGACATTGCTTCGAATGCAACCACGATGATCCAAGTGTCAGCAGTATATATCTCATATTTGAGTTTGCACCATACAAAAGTTTGAGAGCTTGCATATCTGGATCTTCTGGAGAAAAGCTTTCTTGGGCACAGAGAATAGCGGCTGCAATAGGAGTTGTCAAAGGCATTCAATTTTTGCACACAGGGATCGTGCCTGGACTGTATTCAAATAATCTGAAGATAACAAATATTCTGCTGGATAACAATCTCAATGTCAAAATATGCAGCTATAATCTTCCTCTATTGGCTGAAAATAAGATAACGGTCGGAAATGGAACTTTTTCCACTGTAGTTAAAGGAAATGTTCAAGCAAGGACTAAGGATGGTGATAAGAATGATGTCTATGATTTTGGTGTAATCTTACTTGAAATCATTCTAGGACGAACAATCATGTTCCATAATGAAGTCGGAACGCTAAAAGATCTCTTACAGGTAAGCCTCGTAACTGATGAAATAGCTAGAAGGAGCATTGTTGATCCAATAATTCACAAACAATGTTCAGATGAATCAATGAAGAGAGTGATGGAGTTATGTGTGAGATGTGTGTCAGAAGATCCTACTGATAGGCCTTCTGTGGAAGATGCTCTCTGGAATCTGCAGTTTGCAGCACAGGTTCAGAATTCATGGGGAAGAGAATCACCTTCTTCACCCGTCCAAGAAACACAAGGTTCCTCCTAA 2571 0.3882 MSTLSHTTKLAISMVMAKQLHRHFHIFFFIVFFFLAFHRTHQLENSQSHALLKFQKLLGYPPSLSSLRSTKDFCNIEPTNYLTIVCYEDNVTQLHVFGDNGVSPLPQDFSSDSLFATLGTLSSLKVLSLVSMGLWGPIPESISELSSLEILNISTNHFSGEIPNQLSLLKDLQSLVLDNNDFSGEISMWVGSLQGLAVLSMRRNFLSGSVPTSVFHLQTLRVLDLSNNHLHGELPGLDNLKNLQVLNLENNTLGPHFPSLPTKLVSLVLRNNSFRFGVPSNLSSYYQLQKLDLSLNGFVGPFLPSLLSLPSIKYLDVSANKFTGMLFSNYSCNSDILFVNLSSNLLKGELPSCLKPDRKVVSLYARNCFSNENQDQHPPTFCQTEALAVNVLPHEHKQRKRTTGKAVIVSSMGGIVGGAFVFGVVFLVILRVNKKGFVKDPEGSSLEKDISQMNDKDDEVKTPRTVLSVMENIIGRVPKPNKESVKTLARSMMAHVVKKVHHRHVRPARSIVEHVSSVNTAKLLTDARYISQTMKMGASIPAYRTFALDELKEATNNFDASSFISEGARGQIYKGSLSDGTQIAIRSLKMKKRHGSQTYMHHIELISKLRHPHLVSALGHCFECNHDDPSVSSIYLIFEFAPYKSLRACISGSSGEKLSWAQRIAAAIGVVKGIQFLHTGIVPGLYSNNLKITNILLDNNLNVKICSYNLPLLAENKITVGNGTFSTVVKGNVQARTKDGDKNDVYDFGVILLEIILGRTIMFHNEVGTLKDLLQVSLVTDEIARRSIVDPIIHKQCSDESMKRVMELCVRCVSEDPTDRPSVEDALWNLQFAAQVQNSWGRESPSSPVQETQGSS 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1642 856 FunFam Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 262 387 - -
Mibi07g1642 856 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 115 210 - -
Mibi07g1642 856 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 532 640 - -
Mibi07g1642 856 ProSiteProfiles Leucine-rich repeat profile. 219 241 IPR001611 GO:0005515
Mibi07g1642 856 PANTHER UNNAMED PRODUCT 112 759 - -
Mibi07g1642 856 Pfam Protein tyrosine and serine/threonine kinase 563 825 IPR001245 GO:0004672|GO:0006468
Mibi07g1642 856 Gene3D Ribonuclease Inhibitor 210 396 IPR032675 -
Mibi07g1642 856 Pfam Leucine Rich repeats (2 copies) 219 253 IPR025875 -
Mibi07g1642 856 Gene3D Transferase(Phosphotransferase) domain 1 642 840 - -
Mibi07g1642 856 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 642 846 - -
Mibi07g1642 856 Gene3D Phosphorylase Kinase; domain 1 518 639 - -
Mibi07g1642 856 SUPERFAMILY Protein kinase-like (PK-like) 538 832 IPR011009 -
Mibi07g1642 856 ProSiteProfiles Protein kinase domain profile. 558 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi07g1642 856 Gene3D Ribonuclease Inhibitor 44 209 IPR032675 -
Mibi07g1642 856 SUPERFAMILY RNI-like 109 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1642 Mibi-ChrMibi07 31826376 31832269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1642 509 847 Miscellaneous Gene Families AT3G03770 59.064 2.71e-131 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Mibi07g1642 PK_Tyr_Ser-Thr 9.9e-22 CL0016