Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi07g1641 ATGGCTTCCCTCTTCCCCTGTCCCACTCTCTCTTCGAAAATTGACTTCATGATTTCTCCATTATCAGAAGCACGAACTCCTTATCCTAAATTCCATGGCACTAGCTCTTTGGCCGCTCAAAATTTCGGCACCTGTAGACTCTGTGCTTTCAGAAATTCTAACTCTCCAAGCTTTGTTCCAATGGCTTCCGCCATCAGAGAGCCCATGGTTCCCCCTTACCGCGTTTTGATAACTGGTTCAAGCAAAGGAATAGGTTACGCATTGGCAAAAGAGTTTCTAAGAGCTGGTGACTATGTCATAATTTGCTCAAGATCAAATGAAAGGGTAGAATCAGCTGTCCAGACCTTGAGAGAAGAATTTGGGGAGCAGTATGTGTGGGGCACTACGTGTGATGTGAGAGAGGCAGAGGATGTGAAAAATTTAGTTACATATGCCCACGAAAAACTGAAATACATTGATATATGGATTAATAATGCAGGATCAAATGCATATAGCTACAAGCCTCTTGCAGAGGCATCTGATGAAGATCTTATTGAGGTAGTTACAACAAATACACTTGGTTTGATGATATGTTGTCGAGAGGCAATAAAGATGATGGCAAATCAGCCACGTGGAGGTCATATTTTCAATATTGATGGGGCAGGTTCAGATGGAAGACCAACTCCCAGGTTTGCTGCATATGGAGCTACAAAGAGGAGTGCGGTGCATTTAACAAAATCATTACAGGCGGAATTACAGATGCAGGATGTAAAAAATGTGGTGGTGCATAATCTTTCGCCAGGGATGGTAACCACTGATCTTCTCATGTCTGGTGCTACAACTAAACAGGCCAAGTTTTTCATTAATGTATTGGCTGAACCAGCTGAAGTGGTTGCCGAATACCTGGTTCCAAACATTAGATCTACCATTGCCAATGGATTAATGAAGCCGACTTATATTAGATTCCTCACTGGGATTAAAGCGTATTCTCAGATATTTTCACGACTTGCATTCGGTGCAAGAAGGAACCGACACATCCTTGAAGATTGA 1029 0.4247 MASLFPCPTLSSKIDFMISPLSEARTPYPKFHGTSSLAAQNFGTCRLCAFRNSNSPSFVPMASAIREPMVPPYRVLITGSSKGIGYALAKEFLRAGDYVIICSRSNERVESAVQTLREEFGEQYVWGTTCDVREAEDVKNLVTYAHEKLKYIDIWINNAGSNAYSYKPLAEASDEDLIEVVTTNTLGLMICCREAIKMMANQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSAVHLTKSLQAELQMQDVKNVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRSTIANGLMKPTYIRFLTGIKAYSQIFSRLAFGARRNRHILED 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi07g1641 342 FunFam Chlorophyll(Ide) b reductase NOL, chloroplastic 70 315 - -
Mibi07g1641 342 Pfam short chain dehydrogenase 75 270 IPR002347 -
Mibi07g1641 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 74 293 IPR036291 -
Mibi07g1641 342 CDD SDR_c 75 296 - -
Mibi07g1641 342 Gene3D - 73 311 - -
Mibi07g1641 342 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 206 214 IPR002347 -
Mibi07g1641 342 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 161 IPR002347 -
Mibi07g1641 342 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 227 246 IPR002347 -
Mibi07g1641 342 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 214 242 IPR020904 GO:0016491
Mibi07g1641 342 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED 60 334 - -
Mibi07g1641 342 PRINTS Glucose/ribitol dehydrogenase family signature 74 91 IPR002347 -
Mibi07g1641 342 PRINTS Glucose/ribitol dehydrogenase family signature 150 161 IPR002347 -
Mibi07g1641 342 PRINTS Glucose/ribitol dehydrogenase family signature 200 216 IPR002347 -
Mibi07g1641 342 PRINTS Glucose/ribitol dehydrogenase family signature 227 246 IPR002347 -
Mibi07g1641 342 PRINTS Glucose/ribitol dehydrogenase family signature 251 268 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi07g1641 Mibi-ChrMibi07 31765402 31786853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi07g1641 1 267 Acyl Lipid Metabolism Gene Families AT1G24360 27.402 8.51e-17 78.2